Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 486-880 |
| Cow position: | chr27:7471004-7470629 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 489-889 |
| Cow position: | chr27:18482-18085 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 122 |
| Conread position: | 492-649 |
| Cow position: | chr27:4384468-4384627 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 493-631 |
| Cow position: | chr27:5293153-5293295 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 493-880 |
| Cow position: | chr27:12735792-12735387 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 279 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 37, 311 |
| Conread position: | 493-882 |
| Cow position: | chr27:29575583-29575175 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 33, 125 |
| Conread position: | 496-886 |
| Cow position: | chr27:21850802-21850420 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 6, 50 |
| Conread position: | 576-885 |
| Cow position: | chr27:945662-945965 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 643-900 |
| Cow position: | chr27:23073248-23072996 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 192, 15 |
| Conread position: | 647-885 |
| Cow position: | chr27:17656407-17656184 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 663-898 |
| Cow position: | chr27:29833042-29832825 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 664-882 |
| Cow position: | chr27:28016027-28016243 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 27, 115 |
| Conread position: | 664-884 |
| Cow position: | chr27:30678659-30678440 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 65, 113 |
| Conread position: | 664-885 |
| Cow position: | chr27:16720281-16720067 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 116 |
| Conread position: | 664-900 |
| Cow position: | chr27:15698409-15698637 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 174, 50 |
| Conread position: | 667-885 |
| Cow position: | chr27:29516685-29516476 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 201, 14 |
| Conread position: | 670-869 |
| Cow position: | chr27:17931352-17931545 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 166, 110 |
| Conread position: | 674-885 |
| Cow position: | chr27:7776869-7777074 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 712-900 |
| Cow position: | chr27:16120364-16120191 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 722-880 |
| Cow position: | chr27:1563618-1563789 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.