Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 493-840 |
| Cow position: | chr29:14632814-14633168 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 493-885 |
| Cow position: | chr29:5681476-5681869 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 515-898 |
| Cow position: | chr29:21515803-21515419 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 539-874 |
| Cow position: | chr29:14521229-14520881 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 591-882 |
| Cow position: | chr29:22923240-22922954 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 655-886 |
| Cow position: | chr29:24209219-24208990 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 170, 124 |
| Conread position: | 656-885 |
| Cow position: | chr29:42407226-42407002 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 212, 122 |
| Conread position: | 664-885 |
| Cow position: | chr29:9179068-9178850 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 664-900 |
| Cow position: | chr29:21448978-21449207 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 49, 53 |
| Conread position: | 665-898 |
| Cow position: | chr29:282189-281960 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 173, 9 |
| Conread position: | 669-880 |
| Cow position: | chr29:40033884-40034087 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 135, 110 |
| Conread position: | 672-878 |
| Cow position: | chr29:1659572-1659368 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 84, 102 |
| Conread position: | 690-876 |
| Cow position: | chr29:5633940-5633760 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 134, 9 |
| Conread position: | 690-882 |
| Cow position: | chr29:17775302-17775489 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 144, 94 |
| Conread position: | 694-839 |
| Cow position: | chr29:11327893-11328035 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 697-858 |
| Cow position: | chr29:13049956-13050118 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 719-882 |
| Cow position: | chr29:28393409-28393570 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 12 |
| Conread position: | 739-891 |
| Cow position: | chr29:36422673-36422829 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 80, 39 |
Show alignments to all cow chromosomes.