Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 484-707 |
| Cow position: | chr4:17811025-17810789 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 50, 128 |
| Conread position: | 489-881 |
| Cow position: | chr4:12911342-12911728 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 39 |
| Conread position: | 489-898 |
| Cow position: | chr4:15216812-15217218 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 489-900 |
| Cow position: | chr4:58959955-58959522 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 490-885 |
| Cow position: | chr4:36008908-36009318 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 215 |
| Conread position: | 492-795 |
| Cow position: | chr4:13510038-13509733 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 42, 167 |
| Conread position: | 493-755 |
| Cow position: | chr4:45087955-45087702 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 493-793 |
| Cow position: | chr4:62178513-62178805 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 493-869 |
| Cow position: | chr4:10909934-10909563 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 493-881 |
| Cow position: | chr4:40379849-40379441 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 33, 253 |
| Conread position: | 497-886 |
| Cow position: | chr4:53223450-53223834 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 42, 5 |
| Conread position: | 511-882 |
| Cow position: | chr4:37439580-37439958 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 24, 118 |
| Conread position: | 512-880 |
| Cow position: | chr4:19527056-19527424 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 166 |
| Conread position: | 567-885 |
| Cow position: | chr4:19145608-19145931 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 590-879 |
| Cow position: | chr4:40518657-40518941 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 595-846 |
| Cow position: | chr4:26703232-26702986 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 55, 97 |
| Conread position: | 655-900 |
| Cow position: | chr4:47009580-47009815 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 664-876 |
| Cow position: | chr4:61290343-61290546 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 204, 120 |
| Conread position: | 665-881 |
| Cow position: | chr4:59772356-59772564 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 667-900 |
| Cow position: | chr4:43960250-43960023 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 21, 68 |
| Conread position: | 667-900 |
| Cow position: | chr4:50532943-50532718 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 149, 109 |
| Conread position: | 668-878 |
| Cow position: | chr4:50000493-50000703 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 674-880 |
| Cow position: | chr4:25561098-25561300 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 164, 60 |
| Conread position: | 691-883 |
| Cow position: | chr4:47735675-47735868 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 115 |
| Conread position: | 711-885 |
| Cow position: | chr4:17615311-17615138 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 718-893 |
| Cow position: | chr4:27931293-27931472 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 719-896 |
| Cow position: | chr4:29209895-29210072 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 59 |
Show alignments to all cow chromosomes.