Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 489-780 |
| Cow position: | chr6:51659940-51659649 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 82, 109 |
| Conread position: | 489-881 |
| Cow position: | chr6:13886346-13885929 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 115 |
| Conread position: | 489-884 |
| Cow position: | chr6:20690467-20690081 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 160, 47 |
| Conread position: | 489-885 |
| Cow position: | chr6:55913241-55912840 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 503-885 |
| Cow position: | chr6:67010666-67011050 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 268 |
| Conread position: | 512-885 |
| Cow position: | chr6:41167197-41166807 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 513-898 |
| Cow position: | chr6:34742025-34741630 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 127 |
| Conread position: | 535-720 |
| Cow position: | chr6:15724846-15725039 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 664-880 |
| Cow position: | chr6:27599470-27599270 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 203, 65 |
| Conread position: | 664-881 |
| Cow position: | chr6:60044622-60044822 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 174, 22 |
| Conread position: | 664-883 |
| Cow position: | chr6:6769577-6769792 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 158, 19 |
| Conread position: | 664-883 |
| Cow position: | chr6:53706912-53707124 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 53 |
| Conread position: | 669-834 |
| Cow position: | chr6:10438046-10438206 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 669-880 |
| Cow position: | chr6:994604-994396 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 164, 89 |
| Conread position: | 690-839 |
| Cow position: | chr6:50520552-50520696 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 719-884 |
| Cow position: | chr6:7599826-7599990 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 126, 64 |
| Conread position: | 728-883 |
| Cow position: | chr6:44923730-44923569 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 728-898 |
| Cow position: | chr6:33889580-33889414 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 746-885 |
| Cow position: | chr6:1162991-1163128 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 38 |
Show alignments to all cow chromosomes.