Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8014P09.5 |
| Conread position: | 485-885 |
| Cow position: | chr9:10972262-10972648 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 489-798 |
| Cow position: | chr9:35030609-35030926 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 489-841 |
| Cow position: | chr9:52492191-52492539 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 489-869 |
| Cow position: | chr9:30725681-30726069 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 83, 37 |
| Conread position: | 489-889 |
| Cow position: | chr9:49129208-49128800 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 286 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 25, 78 |
| Conread position: | 489-899 |
| Cow position: | chr9:7544587-7544995 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 197 |
| Conread position: | 490-888 |
| Cow position: | chr9:47737240-47736840 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 491-885 |
| Cow position: | chr9:24891782-24891395 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 67 |
| Conread position: | 493-649 |
| Cow position: | chr9:17554671-17554830 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 493-712 |
| Cow position: | chr9:29107487-29107717 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 199 |
| Conread position: | 493-853 |
| Cow position: | chr9:18500083-18500451 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 39, 213 |
| Conread position: | 513-886 |
| Cow position: | chr9:3338771-3339155 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 135 |
| Conread position: | 526-899 |
| Cow position: | chr9:18563969-18563602 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 210 |
| Conread position: | 592-885 |
| Cow position: | chr9:13574329-13574627 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 664-900 |
| Cow position: | chr9:35468288-35468046 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 69, 121 |
| Conread position: | 667-887 |
| Cow position: | chr9:24159722-24159506 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 668-869 |
| Cow position: | chr9:23843906-23844100 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 674-879 |
| Cow position: | chr9:33713962-33714170 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 109, 60 |
| Conread position: | 675-885 |
| Cow position: | chr9:10813976-10814185 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 166, 108 |
| Conread position: | 675-885 |
| Cow position: | chr9:47983124-47983331 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 175, 114 |
| Conread position: | 688-896 |
| Cow position: | chr9:21694537-21694334 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 133, 23 |
| Conread position: | 690-885 |
| Cow position: | chr9:6267485-6267682 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 96 |
Show alignments to all cow chromosomes.