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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8016F16.3
        

               
Conread position:
               
1-83
               

               
Cow position:
               
chr22:8716644-8716562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
83
               

               
Alignm identity:
               
73
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-86
               

               
Cow position:
               
chr22:10649972-10649887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-86
               

               
Cow position:
               
chr22:20569134-20569049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-86
               

               
Cow position:
               
chr22:29464790-29464875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-86
               

               
Cow position:
               
chr22:44099160-44099075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-86
               

               
Cow position:
               
chr22:44490510-44490595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-112
               

               
Cow position:
               
chr22:23802999-23802890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr22:21264076-21263962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr22:3269937-3269813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr22:18928191-18928067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr22:15837675-15837800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr22:13695732-13695603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr22:16292265-16292388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr22:1848384-1848513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr22:14380819-14380947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr22:1874406-1874535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr22:11600479-11600612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr22:12315230-12315370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr22:32651193-32651331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr22:43261773-43261914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr22:17132793-17132651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr22:31870567-31870423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr22:4631691-4631833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr22:12388035-12388180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr22:14878098-14878240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr22:20236666-20236523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr22:32513823-32513681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr22:1986692-1986838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr22:27316347-27316492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr22:226752-226607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 84
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr22:17950269-17950125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:102830-102981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:3565953-3565802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:31316447-31316600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:32407393-32407242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:34615996-34616143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:34735334-34735485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:44740790-44740938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr22:28996402-28996248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr22:22147639-22147798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr22:7157920-7158076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr22:13326079-13325924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr22:21330762-21330606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:13080833-13080678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr22:29881770-29881613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr22:10415599-10415764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr22:10294736-10294900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr22:698120-698287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr22:2080598-2080425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr22:11678857-11678687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr22:14003035-14002868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr22:15174244-15174411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr22:29501655-29501822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr22:6721380-6721213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr22:25337060-25337230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr22:41845664-41845495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr22:45845809-45845977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr22:11037958-11038130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr22:15760039-15760209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr22:22935167-22935339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr22:27577417-27577588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr22:33951053-33950872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
68, 165
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr22:42499461-42499288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr22:3808974-3809149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr22:18837941-18838109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr22:26269629-26269801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr22:43557238-43557063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr22:12225000-12224822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr22:28939450-28939628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr22:43841836-43842019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr22:38949230-38949049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr22:29514220-29514035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 97
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr22:40399888-40400076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr22:21363705-21363512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr22:12868362-12868168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr22:26799633-26799435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr22:14103039-14103238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
170, 145
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr22:30870277-30870076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr22:40590578-40590772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr22:42681920-42681718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 168
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr22:44440416-44440615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr22:10532180-10532384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
158, 86
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr22:22045662-22045861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr22:32892384-32892581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr22:36582945-36582749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:299710-299913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:2414450-2414653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:2551079-2551264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:2669129-2669333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:5343441-5343644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:7302161-7301956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:8640491-8640694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:10550783-10550986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:11127995-11128198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:11233041-11232838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:13329311-13329108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:15729798-15729997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:17936279-17936076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:19503527-19503731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:19597060-19596857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:21192308-21192105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:22107947-22108150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:22563577-22563780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:23205472-23205269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:24913698-24913900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:27281728-27281931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:28135841-28135639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:29624325-29624528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:29818300-29818097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:29866162-29866365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:30674831-30674628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:31375875-31376078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:35593844-35594047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:35640082-35640286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:44479483-44479685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:45039835-45040038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:46566067-46565864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:46582751-46582548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:47547496-47547699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr22:9615613-9615819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr22:27514348-27514552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
137, 77
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr22:31497419-31497215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:76549-76754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:4323913-4324113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:5836918-5837116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:7299579-7299780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:11211909-11211710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:18523478-18523273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:19592095-19592303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:29821839-29822034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:42995573-42995777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr22:44608389-44608593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr22:14359761-14359553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr22:7805561-7805769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
170, 128
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr22:45365806-45366016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr22:6853176-6852971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr22:898442-898652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 53
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr22:13080027-13079814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 154
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr22:25246594-25246801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr22:32944356-32944568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr22:44835329-44835537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr22:4337793-4338000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr22:9155683-9155472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr22:19574381-19574167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr22:27066043-27066257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
126, 149
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr22:35161636-35161429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 31
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr22:36555244-36555042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:2070657-2070865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:4930435-4930220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:6130504-6130289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:6173038-6172823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:10596437-10596652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:12901900-12902115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:14808162-14808375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:21817620-21817835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:30464682-30464467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:39255083-39255298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 87
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:40828159-40827944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:41374394-41374179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr22:10906298-10906082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr22:28127178-28126961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr22:3301638-3301429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
150, 86
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr22:6756624-6756408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr22:10631059-10631274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
208, 77
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr22:28120475-28120692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr22:42933804-42933589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr22:33196148-33195930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr22:9335599-9335387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
213, 143
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr22:5930424-5930204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 89
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr22:16812479-16812260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
204, 163
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr22:40720603-40720385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr22:12527743-12527530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr22:4138421-4138200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
139, 9
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr22:25764126-25763904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr22:5090389-5090610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:556429-556204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:1857735-1857953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
146, 83
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:3432911-3432688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:5364054-5363829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
98, 89
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:17324595-17324370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:29553266-29553045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:41476737-41476519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
201, 105
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:541043-541269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
157, 164
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:1907720-1907946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:14824875-14824655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
201, 69
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:17249170-17248944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:18522715-18522489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:22278997-22279223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:25240628-25240404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
201, 52
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:29855755-29855981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr22:44365302-44365076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr22:8615941-8616167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
201, 33
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr22:38107383-38107602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
213, 33
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:4537911-4538137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
210, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:13553261-13553487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
210, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:13620061-13619835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
210, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:13640826-13641052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:14370521-14370296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
210, 27
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:16048187-16048413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:21244342-21244568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:22842346-22842120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:24631961-24632187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:25235466-25235240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:26018372-26018145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
143, 218
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:27243642-27243868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:27337257-27337031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
210, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:27616677-27616451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:32338684-32338910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:36066783-36066557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:37031722-37031496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:41240934-41241160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr22:12727242-12727025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr22:6623786-6624015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
210, 217
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr22:19713720-19713491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr22:25645846-25645617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
201, 217
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr22:39247014-39247243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 87
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr22:34618420-34618643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
208, 32
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr22:43704945-43705172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
214, 123
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:53794-54028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:583307-583072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:5313125-5313359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:5378106-5378340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:6954179-6953945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:9270107-9270341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:11146589-11146820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:12637366-12637593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:13720849-13720610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:15538029-15538258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
168, 88
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:15869574-15869796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
214, 27
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:18600110-18599880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
213, 158
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:18807338-18807104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:18811018-18810784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:21612718-21612952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:22048293-22048059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:22588753-22588519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:25967819-25967587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:28144200-28143966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:28289769-28289996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
209, 158
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:35933864-35933634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:36189008-36189238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:39903289-39903523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:40121178-40120962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:44936857-44937096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 83
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:45339827-45339593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:891455-891222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
173, 77
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:1696542-1696774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
214, 33
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:2095233-2095467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
213, 141
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:2470563-2470327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
178, 157
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:6092958-6092734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
213, 77
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:6123201-6122986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
209, 33
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:8323931-8324163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:8357298-8357528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
165, 150
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:8732877-8732643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:9977501-9977734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:10603077-10603300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
214, 72
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:11814031-11813804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
205, 61
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:13735575-13735350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
214, 23
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:14376707-14376488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
199, 56
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:15337801-15338033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
214, 33
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:15859691-15859917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
214, 33
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:21012077-21012304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
208, 33
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:23250025-23249793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
160, 33
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:23742020-23741776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
110, 226
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:24611392-24611166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
204, 149
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:28938224-28937984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:29290452-29290221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:30854106-30854340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
162, 88
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:31213253-31213492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:33986081-33985848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
215, 78
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:46758807-46758572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr22:47927446-47927672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
215, 57
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr22:43788446-43788210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 203
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr22:45106235-45105999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 159
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr22:34597616-34597857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr22:39516867-39517106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
215, 142
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr22:14366270-14366030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr22:9251333-9251089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 151
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr22:31646178-31646419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
200, 152
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:11778929-11778683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:22243259-22243011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:44717404-44717639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
204, 43
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:852713-852956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
215, 157
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:995011-995261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 88
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:1710248-1710501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:1791676-1791918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
215, 41
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:2433724-2433969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
200, 94
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:3027765-3028013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
201, 155
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:4161924-4161683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
165, 68
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:5368968-5369217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:5640319-5640070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:6601002-6600753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:6755263-6755015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
201, 79
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:6978640-6978889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:8300058-8300307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:8775813-8775564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:9969164-9968915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:10578656-10578901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
201, 184
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:11643025-11642776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:14374949-14374711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
201, 87
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:14816736-14816497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:14882427-14882181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
105, 94
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:15012784-15012535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:15293013-15292772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:15397958-15397709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:17764059-17764308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:18398892-18398644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
197, 167
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:22155285-22155530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
145, 77
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:25658851-25658606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
214, 163
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:27285343-27285590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
201, 135
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:32661200-32661437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
204, 68
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:33415326-33415091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
204, 40
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:34931069-34930816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
40, 218
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:36193544-36193783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:39303320-39303074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:39708136-39708382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
201, 62
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:40071653-40071909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
123, 208
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:43279574-43279325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:43948951-43948706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:44382514-44382763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:45513836-45513586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
158, 77
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:911789-912027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
215, 12
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:8481332-8481572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
213, 56
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:13776602-13776850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
213, 150
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:21296039-21295797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:21502420-21502672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
113, 78
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:22135896-22136146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:25912615-25912854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
213, 33
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:26151435-26151183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:28071241-28071486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 24
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:34611153-34611401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
184, 77
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:38439474-38439227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
215, 200
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr22:12988051-12987804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
213, 33
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr22:18190121-18190372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr22:30712433-30712691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr22:11489225-11489465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr22:1068231-1067979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
214, 77
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr22:26097926-26097686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
209, 32
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr22:5337913-5337665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
206, 9
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr22:12572883-12573143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr22:26184476-26184227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 77
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr22:30583174-30583428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr22:36569858-36569613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
209, 142
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:59303-59548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
171, 41
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:1289823-1289579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:1484546-1484797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 165
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:3251302-3251056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:3730955-3730700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:3807596-3807850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:3987196-3987454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:4076214-4075952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
201, 77
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:4645462-4645710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
209, 14
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:5282192-5282447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
199, 48
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:6285824-6285572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:6754567-6754315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:6924929-6925187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:7436294-7436545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
201, 40
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:7838289-7838530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:8283667-8283919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
205, 58
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:8303157-8302915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
200, 33
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:8412208-8412465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
213, 199
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:8418152-8418404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
214, 137
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:8773099-8772841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:9685704-9685968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
163, 183
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:10302695-10302953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
201, 48
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:10685395-10685151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
204, 33
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:11200730-11200973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
209, 33
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:11613112-11613362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
213, 77
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:11987530-11987277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 33
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:13670483-13670234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
199, 33
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:14091544-14091284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
173, 33
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:15308054-15307796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:15919951-15919692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
204, 183
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:16001170-16001427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
214, 68
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:16235966-16235712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:16273318-16273574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 77
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:16309443-16309701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:16883547-16883289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:17993346-17993095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
214, 135
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:18025873-18025619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 135
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:19241505-19241247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:19340884-19341144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:20626526-20626776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 51
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:21593316-21593576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:22022574-22022828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
203, 74
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:23759328-23759076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
208, 131
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:27322007-27322255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:28370630-28370880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
208, 178
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:29397988-29398244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
213, 177
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:30710089-30710334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
221, 60
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:30819040-30818789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
214, 33
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:31330967-31330708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:32487773-32487518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:33094245-33094499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:33485920-33485664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:33901391-33901141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
200, 76
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:34894658-34894911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
213, 46
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:35474037-35474292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:36358098-36358356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:36857669-36857410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:37817449-37817693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
204, 33
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:37829426-37829166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:41045230-41044974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
202, 153
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:41365614-41365869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
169, 161
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:43397703-43397950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 78
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:44463215-44463471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
213, 191
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr22:47525396-47525642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
203, 79
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr22:11753747-11753498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr22:17811028-17811287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr22:18258912-18259162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
214, 150
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:1274478-1274219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:8227618-8227362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:8644284-8644543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
146, 224
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:11449544-11449285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
169, 193
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:12671903-12671645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
201, 171
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:15558493-15558235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
201, 53
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:17191462-17191721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
201, 251
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:19787999-19787741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:22054101-22054356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
212, 88
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:32709705-32709446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
201, 251
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:36439626-36439369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
201, 125
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:39747921-39747666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr22:42923175-42922917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
201, 185
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr22:44496780-44497040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
201, 228
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr22:15068092-15068370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 180
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:8679134-8678873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
213, 9
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:14894353-14894614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:17074756-17075023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:24575390-24575125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
201, 107
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:34172358-34172626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:34665736-34665994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
213, 77
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:37289948-37289683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:38940264-38940001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
213, 36
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:39464632-39464370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr22:39494520-39494250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr22:15951194-15950927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr22:3274451-3274187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
201, 184
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr22:7359923-7359657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
201, 251
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr22:23176775-23176491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr22:590032-590291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
215, 56
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr22:2701912-2702186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr22:11258054-11257792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 161
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr22:21567691-21567951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
200, 13
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr22:30689315-30689587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 213
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr22:6610665-6610395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr22:6622561-6622289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
206, 72
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr22:13242120-13242396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
201, 163
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr22:27818684-27818957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 161
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:7153566-7153843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:10920177-10919896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
194, 32
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:16044745-16044462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
131, 94
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:25476750-25477017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
257, 22
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:26106742-26107015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
208, 158
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:26316163-26316428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
200, 69
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:30514939-30515209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 78
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:30954723-30954989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:36539991-36539707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr22:27385358-27385076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
185, 240
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr22:34726358-34726632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
200, 78
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr22:11500465-11500740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr22:12381583-12381863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
201, 158
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr22:15960091-15959803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr22:28179528-28179819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr22:43292218-43291932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr22:877207-877479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
210, 77
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr22:3960612-3960312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr22:8882703-8882986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr22:18654368-18654074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
144, 77
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr22:4535639-4535351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
213, 33
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr22:12259241-12258959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
215, 33
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr22:16915446-16915162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
86, 146
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr22:39472692-39472406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 158
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr22:864836-864543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr22:1279702-1279413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
138, 100
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr22:10339440-10339143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr22:13688428-13688126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
200, 158
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr22:23865146-23865442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 77
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr22:34398771-34398484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 149
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr22:40374290-40374581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 163
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr22:16532750-16533051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 172
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr22:22861227-22860934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 77
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr22:25943165-25943452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 150
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr22:46568205-46567914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
196, 155
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr22:8840271-8840568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
214, 78
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr22:11837517-11837230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 159
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr22:26134548-26134250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
202, 33
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr22:41271306-41271006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
213, 66
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr22:17152363-17152675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
209, 125
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr22:41983020-41982721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
215, 33
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr22:18196192-18196512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
51, 111
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr22:32480781-32480479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
206, 109
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr22:39033255-39033397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-152
               

               
Cow position:
               
chr22:13940532-13940682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-154
               

               
Cow position:
               
chr22:3315819-3315965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chr22:15915327-15915162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr22:43499193-43499024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 76
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr22:15374899-15374724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr22:27002456-27002643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr22:27175566-27175351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 115
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr22:26081217-26081001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr22:171723-171937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr22:19305268-19305054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
97, 86
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr22:11746216-11746006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr22:30206566-30206349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
213, 47
               
UCSC Genome Browser

               
Conread position:
               
2-234
               

               
Cow position:
               
chr22:44402317-44402550 (view  custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
212, 0
               
UCSC Genome Browser

               
               
               
Conread position:
2-235

               
               
               
Cow position:
chr22:10122074-10122305 (view  custom track)

               
               
               
Alignm length:
235

               
               
               
Alignm identity:
178

               
               
               
Alignm E-value:
8.40779e-45

               
               
               
Alignm gaps (pig, cow):
212, 41
UCSC Genome Browser

               
               
               
Conread position:
2-236

               
               
               
Cow position:
chr22:12774582-12774815 (view  custom track)

               
               
               
Alignm length:
235

               
               
               
Alignm identity:
158

               
               
               
Alignm E-value:
1e-28

               
               
               
Alignm gaps (pig, cow):
211, 0

               
               
               Conread position:2-242
               
               
               Cow position:chr22:14005836-14006072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:175
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):77, 112

               
               
               Conread position:2-249
               
               
               Cow position:chr22:4017160-4017405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:179
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):212, 154

               
               
               Conread position:2-249
               
               
               Cow position:chr22:12889737-12889489 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):97, 87

               
               
               Conread position:2-250
               
               
               Cow position:chr22:13957963-13957722 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:185
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):157, 55

               
               
               Conread position:2-255
               
               
               Cow position:chr22:4119883-4119631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:186
               
               
               Alignm E-value:7.9874e-44
               
               
               Alignm gaps (pig, cow):208, 149

               
               
               Conread position:2-255
               
               
               Cow position:chr22:18926039-18926288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:2-258
               
               
               Cow position:chr22:5316131-5316394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:178
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):97, 87

               
               
               Conread position:2-258
               
               
               Cow position:chr22:9370788-9371035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):186, 68

               
               
               Conread position:2-258
               
               
               Cow position:chr22:15049852-15050102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):200, 49

               
               
               Conread position:2-258
               
               
               Cow position:chr22:16620864-16621113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):185, 56

               
               
               Conread position:2-258
               
               
               Cow position:chr22:18021333-18021092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):77, 32

               
               
               Conread position:2-258
               
               
               Cow position:chr22:30049887-30049631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:174
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):61, 32

               
               
               Conread position:2-258
               
               
               Cow position:chr22:41244927-41245182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):46, 108

               
               
               Conread position:2-259
               
               
               Cow position:chr22:24734626-24734374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:178
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):116, 77

               
               
               Conread position:2-259
               
               
               Cow position:chr22:42946381-42946117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:174
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):48, 218

               
               
               Conread position:2-260
               
               
               Cow position:chr22:27306067-27305808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:172
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):184, 51

               
               
               Conread position:2-265
               
               
               Cow position:chr22:6202598-6202863 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:194
               
               
               Alignm E-value:7.00649e-43
               
               
               Alignm gaps (pig, cow):213, 219

               
               
               Conread position:2-265
               
               
               Cow position:chr22:27329200-27328945 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:190
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):38, 79

               
               
               Conread position:2-275
               
               
               Cow position:chr22:14143420-14143155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):212, 5

               
               
               Conread position:2-275
               
               
               Cow position:chr22:14925035-14924775 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):248, 23

               
               
               Conread position:2-275
               
               
               Cow position:chr22:27581135-27581396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):199, 39

               
               
               Conread position:2-290
               
               
               Cow position:chr22:34476315-34476030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:221
               
               
               Alignm E-value:8.40779e-45
               
               
               Alignm gaps (pig, cow):201, 76

               
               
               Conread position:2-292
               
               
               Cow position:chr22:23856733-23857023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):211, 156

               
               
               Conread position:2-295
               
               
               Cow position:chr22:1266254-1265949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):50, 81

               
               
               Conread position:2-295
               
               
               Cow position:chr22:44180278-44180568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:207
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):212, 156

               
               
               Conread position:3-133
               
               
               Cow position:chr22:38959694-38959564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:3-146
               
               
               Cow position:chr22:30190649-30190789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:110
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):81, 21

               
               
               Conread position:3-152
               
               
               Cow position:chr22:14237403-14237258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:117
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:3-165
               
               
               Cow position:chr22:21413720-21413883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:119
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):77, 49

               
               
               Conread position:3-177
               
               
               Cow position:chr22:4984576-4984403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):136, 0

               
               
               Conread position:3-183
               
               
               Cow position:chr22:12569589-12569410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:136
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):13, 54

               
               
               Conread position:3-203
               
               
               Cow position:chr22:13889602-13889797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:143
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):147, 0

               
               
               Conread position:3-205
               
               
               Cow position:chr22:8841997-8842195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):156, 0

               
               
               Conread position:3-205
               
               
               Cow position:chr22:39452265-39452476 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:3-225
               
               
               Cow position:chr22:8340965-8341179 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):212, 31

               
               
               Conread position:3-230
               
               
               Cow position:chr22:15951760-15951532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):199, 0

               
               
               Conread position:3-233
               
               
               Cow position:chr22:22013407-22013632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):211, 75

               
               
               Conread position:3-234
               
               
               Cow position:chr22:25691331-25691107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:164
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):96, 66

               
               
               Conread position:3-235
               
               
               Cow position:chr22:8876957-8877190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:169
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):83, 212

               
               
               Conread position:3-249
               
               
               Cow position:chr22:32189152-32188920 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:179
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):206, 41

               
               
               Conread position:3-257
               
               
               Cow position:chr22:40349032-40349285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):49, 160

               
               
               Conread position:3-258
               
               
               Cow position:chr22:1310041-1309791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):207, 75

               
               
               Conread position:3-258
               
               
               Cow position:chr22:1342428-1342672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:185
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):211, 31

               
               
               Conread position:3-258
               
               
               Cow position:chr22:1610070-1609820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:194
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):197, 163

               
               
               Conread position:3-258
               
               
               Cow position:chr22:3941968-3942222 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:171
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):211, 135

               
               
               Conread position:3-258
               
               
               Cow position:chr22:4990485-4990231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):76, 0

               
               
               Conread position:3-258
               
               
               Cow position:chr22:9734545-9734791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:184
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):199, 31

               
               
               Conread position:3-258
               
               
               Cow position:chr22:13206158-13205902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:180
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):43, 66

               
               
               Conread position:3-258
               
               
               Cow position:chr22:22160407-22160661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:187
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):211, 76

               
               
               Conread position:3-258
               
               
               Cow position:chr22:40366012-40365759 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:167
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):211, 158

               
               
               Conread position:3-260
               
               
               Cow position:chr22:18031133-18031385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):199, 91

               
               
               Conread position:3-263
               
               
               Cow position:chr22:38979417-38979679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):96, 75

               
               
               Conread position:3-272
               
               
               Cow position:chr22:15039499-15039230 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:195
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):63, 39

               
               
               Conread position:3-275
               
               
               Cow position:chr22:1326106-1326372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:197
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):208, 41

               
               
               Conread position:3-275
               
               
               Cow position:chr22:5467682-5467410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:192
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):182, 63

               
               
               Conread position:3-276
               
               
               Cow position:chr22:34712407-34712682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:200
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):208, 39

               
               
               Conread position:3-288
               
               
               Cow position:chr22:30472732-30473017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:210
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):36, 47

               
               
               Conread position:4-208
               
               
               Cow position:chr22:1064822-1065021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:4-235
               
               
               Cow position:chr22:10161653-10161879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):210, 30

               
               
               Conread position:4-258
               
               
               Cow position:chr22:16251878-16251628 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):43, 76

               
               
               Conread position:4-258
               
               
               Cow position:chr22:20112190-20112439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):210, 39

               
               
               Conread position:5-164
               
               
               Cow position:chr22:1998078-1998236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):88, 41

               
               
               Conread position:5-165
               
               
               Cow position:chr22:34608669-34608829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:5-234
               
               
               Cow position:chr22:21407494-21407716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:158
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):210, 29

               
               
               Conread position:5-235
               
               
               Cow position:chr22:13017093-13016875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):142, 73

               
               
               Conread position:5-235
               
               
               Cow position:chr22:13861276-13861503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):16, 30

               
               
               Conread position:5-250
               
               
               Cow position:chr22:36208616-36208866 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):32, 86

               
               
               Conread position:5-258
               
               
               Cow position:chr22:13011589-13011333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):156, 200

               
               
               Conread position:5-258
               
               
               Cow position:chr22:27700902-27701150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):199, 73

               
               
               Conread position:5-260
               
               
               Cow position:chr22:4083413-4083668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:171
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):73, 217

               
               
               Conread position:6-160
               
               
               Cow position:chr22:12998623-12998469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:6-186
               
               
               Cow position:chr22:15398886-15398708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):160, 28

               
               
               Conread position:6-205
               
               
               Cow position:chr22:15046664-15046869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):64, 138

               
               
               Conread position:6-209
               
               
               Cow position:chr22:14964437-14964234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:6-234
               
               
               Cow position:chr22:8817256-8817481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):53, 85

               
               
               Conread position:6-234
               
               
               Cow position:chr22:19823112-19823338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:156
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):179, 14

               
               
               Conread position:6-245
               
               
               Cow position:chr22:39508342-39508118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:167
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:6-273
               
               
               Cow position:chr22:12682103-12681847 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):251, 89

               
               
               Conread position:6-289
               
               
               Cow position:chr22:21746328-21746616 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):75, 119

               
               
               Conread position:7-160
               
               
               Cow position:chr22:20323966-20323815 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:118
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:7-164
               
               
               Cow position:chr22:36850637-36850479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:113
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):148, 0

               
               
               Conread position:7-258
               
               
               Cow position:chr22:5290533-5290786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:188
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):5, 71

               
               
               Conread position:7-266
               
               
               Cow position:chr22:27171565-27171309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:181
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):78, 42

               
               
               Conread position:7-272
               
               
               Cow position:chr22:25206279-25206012 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:193
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):207, 71

               
               
               Conread position:7-275
               
               
               Cow position:chr22:8063634-8063367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):202, 57

               
               
               Conread position:8-152
               
               
               Cow position:chr22:21263962-21263818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:8-205
               
               
               Cow position:chr22:33798093-33797901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):130, 66

               
               
               Conread position:8-235
               
               
               Cow position:chr22:10937142-10936915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:9-152
               
               
               Cow position:chr22:11467843-11467986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:107
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):90, 80

               
               
               Conread position:9-168
               
               
               Cow position:chr22:13023498-13023339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:121
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:9-203
               
               
               Cow position:chr22:3697317-3697508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:141
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:9-250
               
               
               Cow position:chr22:2502530-2502765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:183
               
               
               Alignm E-value:7.9874e-44
               
               
               Alignm gaps (pig, cow):205, 70

               
               
               Conread position:9-258
               
               
               Cow position:chr22:23805289-23805045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:175
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):78, 22

               
               
               Conread position:10-144
               
               
               Cow position:chr22:3011268-3011134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:99
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:10-210
               
               
               Cow position:chr22:1123-1319 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):149, 0

               
               
               Conread position:10-258
               
               
               Cow position:chr22:13840835-13841074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:179
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):204, 59

               
               
               Conread position:10-258
               
               
               Cow position:chr22:30483608-30483854 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:176
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):138, 23

               
               
               Conread position:11-201
               
               
               Cow position:chr22:13866343-13866525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):36, 17

               
               
               Conread position:11-234
               
               
               Cow position:chr22:132802-133021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):191, 77

               
               
               Conread position:11-275
               
               
               Cow position:chr22:26490153-26490418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):49, 134

               
               
               Conread position:12-152
               
               
               Cow position:chr22:37032335-37032195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:106
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-258
               
               
               Cow position:chr22:1974459-1974209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:164
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):26, 84

               
               
               Conread position:13-205
               
               
               Cow position:chr22:3842322-3842515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:13-236
               
               
               Cow position:chr22:4043632-4043849 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):201, 21

               
               
               Conread position:13-246
               
               
               Cow position:chr22:30093949-30094169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):202, 33

               
               
               Conread position:13-249
               
               
               Cow position:chr22:36327170-36327407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:158
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):189, 0

               
               
               Conread position:15-214
               
               
               Cow position:chr22:40805595-40805787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:137
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:15-228
               
               
               Cow position:chr22:22401432-22401644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):187, 203

               
               
               Conread position:17-204
               
               
               Cow position:chr22:26088343-26088156 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:130
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:17-228
               
               
               Cow position:chr22:37261851-37262061 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):185, 201

               
               
               Conread position:18-200
               
               
               Cow position:chr22:45542942-45542760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:125
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:19-146
               
               
               Cow position:chr22:30364781-30364905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:98
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:19-209
               
               
               Cow position:chr22:40853112-40853311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:145
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):35, 78

               
               
               Conread position:19-221
               
               
               Cow position:chr22:8329251-8329449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:155
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):182, 59

               
               
               Conread position:19-249
               
               
               Cow position:chr22:521589-521358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):183, 0

               
               
               Conread position:19-258
               
               
               Cow position:chr22:11130573-11130805 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):28, 55

               
               
               Conread position:19-258
               
               
               Cow position:chr22:12736029-12736265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):183, 137

               
               
               Conread position:20-214
               
               
               Cow position:chr22:13950875-13951069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):65, 79

               
               
               Conread position:20-218
               
               
               Cow position:chr22:4356802-4356993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):24, 8

               
               
               Conread position:21-168
               
               
               Cow position:chr22:19169335-19169482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:109
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):78, 68

               
               
               Conread position:21-234
               
               
               Cow position:chr22:11802169-11801954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):59, 198

               
               
               Conread position:21-256
               
               
               Cow position:chr22:3949945-3950187 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:21-257
               
               
               Cow position:chr22:3993314-3993548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:173
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):197, 127

               
               
               Conread position:23-234
               
               
               Cow position:chr22:13702260-13702047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:154
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:26-235
               
               
               Cow position:chr22:15490370-15490573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:27-265
               
               
               Cow position:chr22:766570-766331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):57, 138

               
               
               Conread position:28-214
               
               
               Cow position:chr22:3387469-3387289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:135
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):31, 53

               
               
               Conread position:28-258
               
               
               Cow position:chr22:38549506-38549729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):186, 50

               
               
               Conread position:28-276
               
               
               Cow position:chr22:645049-644807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):185, 48

               
               
               Conread position:28-291
               
               
               Cow position:chr22:3316840-3317093 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):173, 70

               
               
               Conread position:28-316
               
               
               Cow position:chr22:38930803-38930505 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:215
               
               
               Alignm E-value:7.00649e-43
               
               
               Alignm gaps (pig, cow):177, 276

               
               
               Conread position:29-204
               
               
               Cow position:chr22:19579587-19579763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:125
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:29-204
               
               
               Cow position:chr22:38952783-38952959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:122
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:29-258
               
               
               Cow position:chr22:32210529-32210758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):181, 188

               
               
               Conread position:30-205
               
               
               Cow position:chr22:33201200-33201374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):100, 43

               
               
               Conread position:30-237
               
               
               Cow position:chr22:35562697-35562905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):172, 0

               
               
               Conread position:30-250
               
               
               Cow position:chr22:8446645-8446868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):87, 49

               
               
               Conread position:31-185
               
               
               Cow position:chr22:6101599-6101446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:34-133
               
               
               Cow position:chr22:14638749-14638649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:101
               
               
               Alignm identity:83
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:34-218
               
               
               Cow position:chr22:15950660-15950482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:136
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):180, 107

               
               
               Conread position:34-228
               
               
               Cow position:chr22:10099686-10099493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):168, 184

               
               
               Conread position:34-249
               
               
               Cow position:chr22:33195618-33195404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):168, 55

               
               
               Conread position:34-260
               
               
               Cow position:chr22:14602679-14602459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):10, 123

               
               
               Conread position:34-266
               
               
               Cow position:chr22:6204577-6204346 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:175
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):168, 119

               
               
               Conread position:34-269
               
               
               Cow position:chr22:4988842-4988610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):229, 164

               
               
               Conread position:35-219
               
               
               Cow position:chr22:11590334-11590518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:36-235
               
               
               Cow position:chr22:19714645-19714838 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):178, 123

               
               
               Conread position:36-249
               
               
               Cow position:chr22:17073865-17074082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:144
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):139, 0

               
               
               Conread position:37-213
               
               
               Cow position:chr22:31599103-31599269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:131
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:37-215
               
               
               Cow position:chr22:43040743-43040564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):165, 0

               
               
               Conread position:37-221
               
               
               Cow position:chr22:27431963-27431787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:137
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):176, 122

               
               
               Conread position:37-249
               
               
               Cow position:chr22:6633387-6633174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):165, 0

               
               
               Conread position:37-249
               
               
               Cow position:chr22:10620958-10621171 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):165, 0

               
               
               Conread position:37-249
               
               
               Cow position:chr22:21407927-21408144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):17, 42

               
               
               Conread position:37-249
               
               
               Cow position:chr22:32326521-32326731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):165, 89

               
               
               Conread position:38-226
               
               
               Cow position:chr22:24269114-24268925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:130
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):164, 0

               
               
               Conread position:38-275
               
               
               Cow position:chr22:1975334-1975569 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):178, 8

               
               
               Conread position:39-272
               
               
               Cow position:chr22:5042041-5042272 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:166
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):66, 121

               
               
               Conread position:40-204
               
               
               Cow position:chr22:19493604-19493440 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:115
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:40-235
               
               
               Cow position:chr22:36546208-36546012 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):143, 122

               
               
               Conread position:41-221
               
               
               Cow position:chr22:31196772-31196597 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):165, 39

               
               
               Conread position:41-249
               
               
               Cow position:chr22:34441912-34441704 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:145
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):5, 57

               
               
               Conread position:41-258
               
               
               Cow position:chr22:21355418-21355201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):5, 39

               
               
               Conread position:41-269
               
               
               Cow position:chr22:2105531-2105304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):147, 15

               
               
               Conread position:41-273
               
               
               Cow position:chr22:2148290-2148528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:168
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):38, 160

               
               
               Conread position:43-250
               
               
               Cow position:chr22:2403599-2403805 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:147
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:43-258
               
               
               Cow position:chr22:37201583-37201791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:161
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):88, 71

               
               
               Conread position:44-215
               
               
               Cow position:chr22:519284-519112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:119
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):158, 0

               
               
               Conread position:44-250
               
               
               Cow position:chr22:11370864-11370658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):170, 157

               
               
               Conread position:45-316
               
               
               Cow position:chr22:29013607-29013882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):157, 23

               
               
               Conread position:46-199
               
               
               Cow position:chr22:12892838-12892689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):113, 0

               
               
               Conread position:46-244
               
               
               Cow position:chr22:2216551-2216746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:150
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):12, 112

               
               
               Conread position:46-250
               
               
               Cow position:chr22:2623785-2623590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:147
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):169, 33

               
               
               Conread position:46-255
               
               
               Cow position:chr22:19848666-19848461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):164, 33

               
               
               Conread position:46-255
               
               
               Cow position:chr22:33949274-33949065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:153
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):33, 86

               
               
               Conread position:46-258
               
               
               Cow position:chr22:4650910-4651118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):113, 0

               
               
               Conread position:46-258
               
               
               Cow position:chr22:14691248-14691030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:46-258
               
               
               Cow position:chr22:36784749-36784536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:144
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):53, 43

               
               
               Conread position:46-260
               
               
               Cow position:chr22:40048292-40048491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:153
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):113, 0

               
               
               Conread position:46-261
               
               
               Cow position:chr22:46611052-46610844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):127, 0

               
               
               Conread position:46-275
               
               
               Cow position:chr22:9372249-9372477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:171
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):77, 51

               
               
               Conread position:46-282
               
               
               Cow position:chr22:26339488-26339718 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):40, 106

               
               
               Conread position:47-149
               
               
               Cow position:chr22:9278633-9278735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:103
               
               
               Alignm identity:85
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:47-211
               
               
               Cow position:chr22:18326853-18326695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:47-224
               
               
               Cow position:chr22:37145076-37145246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:136
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):39, 105

               
               
               Conread position:47-247
               
               
               Cow position:chr22:9127136-9127332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):169, 32

               
               
               Conread position:47-250
               
               
               Cow position:chr22:845633-845830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:47-258
               
               
               Cow position:chr22:19308609-19308400 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:143
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):166, 109

               
               
               Conread position:47-258
               
               
               Cow position:chr22:35753576-35753370 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):91, 79

               
               
               Conread position:47-258
               
               
               Cow position:chr22:39294013-39293807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:144
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):178, 23

               
               
               Conread position:47-262
               
               
               Cow position:chr22:25341750-25341962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):167, 112

               
               
               Conread position:47-275
               
               
               Cow position:chr22:23854710-23854931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):16, 78

               
               
               Conread position:47-275
               
               
               Cow position:chr22:34750407-34750633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):162, 134

               
               
               Conread position:47-282
               
               
               Cow position:chr22:6360760-6360525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):10, 111

               
               
               Conread position:47-283
               
               
               Cow position:chr22:29955269-29955034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:172
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):207, 81

               
               
               Conread position:47-296
               
               
               Cow position:chr22:9520880-9521117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:173
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:48-249
               
               
               Cow position:chr22:27480622-27480824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):153, 119

               
               
               Conread position:48-252
               
               
               Cow position:chr22:35902963-35902769 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:148
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):91, 31

               
               
               Conread position:49-205
               
               
               Cow position:chr22:23798986-23798834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:115
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:49-235
               
               
               Cow position:chr22:29641841-29642029 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:138
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):10, 90

               
               
               Conread position:49-250
               
               
               Cow position:chr22:6493906-6494099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:145
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):160, 30

               
               
               Conread position:49-250
               
               
               Cow position:chr22:25743221-25743021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):40, 125

               
               
               Conread position:49-255
               
               
               Cow position:chr22:35533623-35533426 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:146
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):165, 29

               
               
               Conread position:49-258
               
               
               Cow position:chr22:1590753-1590960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):165, 8

               
               
               Conread position:49-274
               
               
               Cow position:chr22:16057433-16057658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:159
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):152, 94

               
               
               Conread position:50-249
               
               
               Cow position:chr22:6215821-6215631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:50-250
               
               
               Cow position:chr22:7884724-7884918 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):160, 109

               
               
               Conread position:50-258
               
               
               Cow position:chr22:26141007-26141213 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):165, 18

               
               
               Conread position:51-196
               
               
               Cow position:chr22:10609063-10609204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:110
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:51-255
               
               
               Cow position:chr22:15090474-15090675 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):163, 108

               
               
               Conread position:52-258
               
               
               Cow position:chr22:1822138-1821936 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):163, 10

               
               
               Conread position:53-235
               
               
               Cow position:chr22:37029866-37029685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):60, 26

               
               
               Conread position:53-249
               
               
               Cow position:chr22:22612847-22613039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):27, 106

               
               
               Conread position:53-258
               
               
               Cow position:chr22:534229-534437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):148, 0

               
               
               Conread position:53-276
               
               
               Cow position:chr22:28058305-28058094 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):161, 26

               
               
               Conread position:54-221
               
               
               Cow position:chr22:28146421-28146587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:126
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):151, 110

               
               
               Conread position:54-258
               
               
               Cow position:chr22:295200-294998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):147, 125

               
               
               Conread position:54-265
               
               
               Cow position:chr22:5016253-5016457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):160, 15

               
               
               Conread position:54-300
               
               
               Cow position:chr22:44386661-44386425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:174
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):153, 49

               
               
               Conread position:55-249
               
               
               Cow position:chr22:24066497-24066308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):51, 29

               
               
               Conread position:55-250
               
               
               Cow position:chr22:45685294-45685096 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):46, 23

               
               
               Conread position:55-258
               
               
               Cow position:chr22:14179093-14178888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:146
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):94, 24

               
               
               Conread position:55-258
               
               
               Cow position:chr22:36761371-36761565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:56-205
               
               
               Cow position:chr22:10683926-10683777 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:56-258
               
               
               Cow position:chr22:37324286-37324482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:153
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):159, 45

               
               
               Conread position:56-276
               
               
               Cow position:chr22:28665007-28665244 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:57-211
               
               
               Cow position:chr22:7518156-7518310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:109
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:57-259
               
               
               Cow position:chr22:38313724-38313530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):148, 102

               
               
               Conread position:57-265
               
               
               Cow position:chr22:23181294-23181093 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):122, 22

               
               
               Conread position:57-272
               
               
               Cow position:chr22:31593121-31592904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:154
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):154, 102

               
               
               Conread position:57-291
               
               
               Cow position:chr22:3325321-3325557 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:161
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):152, 130

               
               
               Conread position:58-250
               
               
               Cow position:chr22:31194813-31195006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:58-258
               
               
               Cow position:chr22:7967439-7967639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):133, 21

               
               
               Conread position:58-258
               
               
               Cow position:chr22:25784182-25783986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:140
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):164, 21

               
               
               Conread position:59-249
               
               
               Cow position:chr22:23115563-23115374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:128
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:59-273
               
               
               Cow position:chr22:19653239-19653030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):144, 35

               
               
               Conread position:59-275
               
               
               Cow position:chr22:26658797-26659011 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):150, 100

               
               
               Conread position:60-205
               
               
               Cow position:chr22:19295652-19295798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:106
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:60-258
               
               
               Cow position:chr22:3713009-3713202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:141
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):155, 8

               
               
               Conread position:61-218
               
               
               Cow position:chr22:15730603-15730758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:120
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):24, 92

               
               
               Conread position:61-289
               
               
               Cow position:chr22:26786097-26786325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:153
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):153, 118

               
               
               Conread position:62-259
               
               
               Cow position:chr22:29256569-29256373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:134
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):144, 17

               
               
               Conread position:67-289
               
               
               Cow position:chr22:3964935-3965157 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:156
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):133, 86

               
               
               Conread position:68-258
               
               
               Cow position:chr22:42684650-42684845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):17, 91

               
               
               Conread position:69-290
               
               
               Cow position:chr22:25222149-25221926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):140, 10

               
               
               Conread position:69-291
               
               
               Cow position:chr22:7851711-7851936 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:160
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):134, 147

               
               
               Conread position:70-292
               
               
               Cow position:chr22:25630020-25629787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:71-250
               
               
               Cow position:chr22:7882303-7882482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):14, 138

               
               
               Conread position:74-249
               
               
               Cow position:chr22:2141571-2141743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:125
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):140, 90

               
               
               Conread position:74-250
               
               
               Cow position:chr22:28356792-28356968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):131, 140

               
               
               Conread position:74-273
               
               
               Cow position:chr22:2010556-2010756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:143
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):131, 69

               
               
               Conread position:79-258
               
               
               Cow position:chr22:37067036-37066853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:130
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):79, 84

               
               
               Conread position:80-291
               
               
               Cow position:chr22:22145989-22146205 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:98-277
               
               
               Cow position:chr22:27825617-27825798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:132
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):107, 66

               
               
               Conread position:111-259
               
               
               Cow position:chr22:1601977-1602131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:113
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):92, 0
Show alignments to all cow chromosomes.