Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8016F16.3
        

               Conread position:
               1-82
               

               Cow position:
               chr28:789999-789918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-87
               

               Cow position:
               chr28:7005976-7006062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               75
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-89
               

               Cow position:
               chr28:746863-746951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-93
               

               Cow position:
               chr28:5145026-5144934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 79
               

               Conread position:
               1-93
               

               Cow position:
               chr28:24674413-24674506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-112
               

               Cow position:
               chr28:10589336-10589225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-115
               

               Cow position:
               chr28:3474665-3474779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-123
               

               Cow position:
               chr28:8972665-8972787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr28:6484581-6484457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr28:10886183-10886059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr28:5110663-5110538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-132
               

               Cow position:
               chr28:2132282-2132153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr28:12342675-12342541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               1-134
               

               Cow position:
               chr28:25768166-25768300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr28:8290428-8290569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr28:5747758-5747618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr28:29942845-29942985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               1-143
               

               Cow position:
               chr28:3000918-3000776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               118, 74
               

               Conread position:
               1-143
               

               Cow position:
               chr28:19194454-19194597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr28:7009313-7009174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 40
               

               Conread position:
               1-148
               

               Cow position:
               chr28:25399583-25399729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               1-149
               

               Cow position:
               chr28:12593328-12593474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr28:19300989-19301137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-149
               

               Cow position:
               chr28:32300673-32300519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-151
               

               Cow position:
               chr28:7443752-7443902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr28:1316097-1315944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-157
               

               Cow position:
               chr28:10616257-10616103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr28:4536164-4536322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr28:18180442-18180284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               1-162
               

               Cow position:
               chr28:3097749-3097909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr28:25128290-25128124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr28:16215198-16215033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr28:22582729-22582896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr28:23114590-23114423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr28:25693865-25693698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr28:7485485-7485317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr28:9647333-9647167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr28:10577924-10577754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr28:14742493-14742663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr28:16003759-16003929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr28:28724165-28724335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-173
               

               Cow position:
               chr28:3646402-3646569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr28:7946063-7945885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr28:10463913-10463735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-187
               

               Cow position:
               chr28:34561051-34561239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               148, 161
               

               Conread position:
               1-197
               

               Cow position:
               chr28:10867603-10867799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               1-197
               

               Cow position:
               chr28:16365108-16364910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 96
               

               Conread position:
               1-198
               

               Cow position:
               chr28:22359250-22359445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               127, 33
               

               Conread position:
               1-198
               

               Cow position:
               chr28:28766217-28766020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr28:5792395-5792587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               1-200
               

               Cow position:
               chr28:7882497-7882698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               136, 33
               

               Conread position:
               1-200
               

               Cow position:
               chr28:16246572-16246378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               165, 50
               

               Conread position:
               1-202
               

               Cow position:
               chr28:1884919-1885121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr28:12938695-12938891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr28:17762351-17762553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               1-203
               

               Cow position:
               chr28:33697806-33698013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               1-204
               

               Cow position:
               chr28:332396-332599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:800589-800386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:3882002-3881799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:6651033-6650830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:10642323-10642126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               1-204
               

               Cow position:
               chr28:10868463-10868260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:11759844-11759647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:12701815-12702018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:12980860-12980652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:13323055-13322852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:17687713-17687510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:22317169-22317379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               36, 79
               

               Conread position:
               1-204
               

               Cow position:
               chr28:22318957-22318754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:22577148-22577351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:23312623-23312420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:24993435-24993638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:25556270-25556074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:25829343-25829542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:27938768-27938971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:29392695-29392898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:29683185-29683388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:30561157-30561360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr28:31972059-31971864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 89
               

               Conread position:
               1-205
               

               Cow position:
               chr28:3011727-3011533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               145, 56
               

               Conread position:
               1-205
               

               Cow position:
               chr28:30967160-30967358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr28:1508828-1509032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               1-206
               

               Cow position:
               chr28:13719213-13719413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               185, 45
               

               Conread position:
               1-206
               

               Cow position:
               chr28:15600957-15601154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr28:18516197-18515988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 178
               

               Conread position:
               1-206
               

               Cow position:
               chr28:25762725-25762919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr28:30532050-30531845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-207
               

               Cow position:
               chr28:5054335-5054127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr28:24215580-24215788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               85, 71
               

               Conread position:
               1-208
               

               Cow position:
               chr28:7336926-7337132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr28:882819-882611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr28:23309388-23309180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 89
               

               Conread position:
               1-211
               

               Cow position:
               chr28:30994976-30995179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               202, 47
               

               Conread position:
               1-213
               

               Cow position:
               chr28:34656032-34656246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-214
               

               Cow position:
               chr28:16879572-16879373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-214
               

               Cow position:
               chr28:17345374-17345164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               192, 19
               

               Conread position:
               1-214
               

               Cow position:
               chr28:29044317-29044529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               201, 158
               

               Conread position:
               1-215
               

               Cow position:
               chr28:1575557-1575342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:7059977-7060192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:7715866-7715651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:7794466-7794250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:7936585-7936800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:7970791-7970576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:10512837-10513053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:11924126-11923911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               45, 202
               

               Conread position:
               1-215
               

               Cow position:
               chr28:12260160-12259945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:15408748-15408533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:23823377-23823162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:30250074-30250289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr28:30284085-30283870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-217
               

               Cow position:
               chr28:17316557-17316768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               141, 23
               

               Conread position:
               1-217
               

               Cow position:
               chr28:24592458-24592675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               1-219
               

               Cow position:
               chr28:2800939-2801155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               144, 33
               

               Conread position:
               1-219
               

               Cow position:
               chr28:5366452-5366221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               1-220
               

               Cow position:
               chr28:10455837-10455617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr28:29806504-29806290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               172, 57
               

               Conread position:
               1-221
               

               Cow position:
               chr28:7013895-7013676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               194, 97
               

               Conread position:
               1-221
               

               Cow position:
               chr28:10977557-10977769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               108, 160
               

               Conread position:
               1-221
               

               Cow position:
               chr28:22279488-22279285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               1-222
               

               Cow position:
               chr28:7372558-7372342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr28:27754903-27755124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               168, 211
               

               Conread position:
               1-223
               

               Cow position:
               chr28:17359039-17358819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr28:5941435-5941659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-224
               

               Cow position:
               chr28:29824133-29824357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr28:28116569-28116791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               1-226
               

               Cow position:
               chr28:2512678-2512452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr28:2645657-2645882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               201, 79
               

               Conread position:
               1-226
               

               Cow position:
               chr28:7209177-7208957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               214, 77
               

               Conread position:
               1-226
               

               Cow position:
               chr28:10193087-10192861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr28:19564900-19564678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               81, 178
               

               Conread position:
               1-226
               

               Cow position:
               chr28:22083805-22083579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr28:23212292-23212067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               98, 49
               

               Conread position:
               1-226
               

               Cow position:
               chr28:23489796-23489570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr28:34243655-34243881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-227
               

               Cow position:
               chr28:16182296-16182522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-228
               

               Cow position:
               chr28:2615876-2615650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr28:3891926-3892151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr28:7197159-7196934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               210, 19
               

               Conread position:
               1-228
               

               Cow position:
               chr28:9710206-9709980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr28:10871037-10871263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr28:14434023-14434249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr28:15107632-15107406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr28:15616498-15616724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr28:19186171-19186397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr28:25893137-25892911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-231
               

               Cow position:
               chr28:3024216-3023993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               201, 38
               

               Conread position:
               1-233
               

               Cow position:
               chr28:3479958-3480193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               46, 161
               

               Conread position:
               1-233
               

               Cow position:
               chr28:10888356-10888589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-233
               

               Cow position:
               chr28:14113373-14113606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-233
               

               Cow position:
               chr28:22500793-22500572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 83
               

               Conread position:
               1-234
               

               Cow position:
               chr28:1213856-1213622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-234
               

               Cow position:
               chr28:2089189-2089423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-234
               

               Cow position:
               chr28:2949235-2949463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-234
               

               Cow position:
               chr28:4310937-4311170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               201, 123
               

               Conread position:
               1-234
               

               Cow position:
               chr28:4582931-4583165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               185, 33
               

               Conread position:
               1-234
               

               Cow position:
               chr28:5311402-5311168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr28:7888137-7887903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr28:11505323-11505092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-234
               

               Cow position:
               chr28:11733432-11733198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr28:17663001-17662767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr28:20934452-20934220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               213, 88
               

               Conread position:
               1-234
               

               Cow position:
               chr28:22208834-22208600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr28:23802347-23802573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               146, 156
               

               Conread position:
               1-234
               

               Cow position:
               chr28:28356838-28356604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr28:28792166-28792392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               201, 155
               

               Conread position:
               1-234
               

               Cow position:
               chr28:28798600-28798369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               1-234
               

               Cow position:
               chr28:33466514-33466751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 164
               

               Conread position:
               1-234
               

               Cow position:
               chr28:34008260-34008020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 94
               

               Conread position:
               1-234
               

               Cow position:
               chr28:34626727-34626961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-235
               

               Cow position:
               chr28:5771059-5771289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               79, 161
               

               Conread position:
               1-235
               

               Cow position:
               chr28:6059774-6059542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               191, 42
               

               Conread position:
               1-235
               

               Cow position:
               chr28:6971646-6971422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               212, 77
               

               Conread position:
               1-235
               

               Cow position:
               chr28:7268240-7268013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               209, 29
               

               Conread position:
               1-235
               

               Cow position:
               chr28:7751607-7751374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               106, 9
               

               Conread position:
               1-235
               

               Cow position:
               chr28:11752452-11752218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               209, 213
               

               Conread position:
               1-235
               

               Cow position:
               chr28:16109646-16109865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               210, 33
               

               Conread position:
               1-235
               

               Cow position:
               chr28:21844649-21844882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               213, 78
               

               Conread position:
               1-235
               

               Cow position:
               chr28:22308354-22308572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               166, 42
               

               Conread position:
               1-235
               

               Cow position:
               chr28:25727074-25727301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               213, 78
               

               Conread position:
               1-235
               

               Cow position:
               chr28:31142271-31142043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               214, 56
               

               Conread position:
               1-242
               

               Cow position:
               chr28:8372164-8372404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               204, 45
               

               Conread position:
               1-245
               

               Cow position:
               chr28:18590963-18591206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               84, 69
               

               Conread position:
               1-247
               

               Cow position:
               chr28:9267793-9268040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               1-247
               

               Cow position:
               chr28:31223901-31223650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               197, 79
               

               Conread position:
               1-248
               

               Cow position:
               chr28:7503530-7503779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 40
               

               Conread position:
               1-248
               

               Cow position:
               chr28:10900513-10900755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               99, 92
               

               Conread position:
               1-248
               

               Cow position:
               chr28:13474000-13474236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               1-249
               

               Cow position:
               chr28:481762-481513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:1199143-1199392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:1261953-1262202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:3628023-3628272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:3745896-3746142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               204, 45
               

               Conread position:
               1-249
               

               Cow position:
               chr28:5071467-5071218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               201, 232
               

               Conread position:
               1-249
               

               Cow position:
               chr28:5805212-5805454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               43, 91
               

               Conread position:
               1-249
               

               Cow position:
               chr28:6534849-6534600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:7830512-7830761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:10934466-10934217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:11281009-11280760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:11787013-11786775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               213, 56
               

               Conread position:
               1-249
               

               Cow position:
               chr28:13693442-13693688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               84, 126
               

               Conread position:
               1-249
               

               Cow position:
               chr28:14610452-14610701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-249
               

               Cow position:
               chr28:15285851-15285603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               98, 87
               

               Conread position:
               1-249
               

               Cow position:
               chr28:16598095-16598346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               110, 33
               

               Conread position:
               1-249
               

               Cow position:
               chr28:21491478-21491229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:21893833-21893584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:23231372-23231128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               213, 45
               

               Conread position:
               1-249
               

               Cow position:
               chr28:25104783-25105032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               1-249
               

               Cow position:
               chr28:27478715-27478962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               1-249
               

               Cow position:
               chr28:28213936-28214184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               198, 213
               

               Conread position:
               1-249
               

               Cow position:
               chr28:29222339-29222095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               201, 127
               

               Conread position:
               1-249
               

               Cow position:
               chr28:34379748-34379997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-250
               

               Cow position:
               chr28:3751012-3751252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               214, 77
               

               Conread position:
               1-250
               

               Cow position:
               chr28:5203898-5204130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               213, 23
               

               Conread position:
               1-250
               

               Cow position:
               chr28:7865024-7865262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               208, 33
               

               Conread position:
               1-250
               

               Cow position:
               chr28:10534234-10533996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-250
               

               Cow position:
               chr28:11527561-11527321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               213, 43
               

               Conread position:
               1-250
               

               Cow position:
               chr28:12619258-12619506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               213, 33
               

               Conread position:
               1-250
               

               Cow position:
               chr28:22332243-22332473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               213, 56
               

               Conread position:
               1-251
               

               Cow position:
               chr28:25805374-25805613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               184, 39
               

               Conread position:
               1-252
               

               Cow position:
               chr28:12964270-12964507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               213, 120
               

               Conread position:
               1-252
               

               Cow position:
               chr28:16211404-16211151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               149, 214
               

               Conread position:
               1-252
               

               Cow position:
               chr28:16441083-16441323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               213, 33
               

               Conread position:
               1-252
               

               Cow position:
               chr28:22132619-22132865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               180, 155
               

               Conread position:
               1-254
               

               Cow position:
               chr28:3256494-3256739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               204, 75
               

               Conread position:
               1-255
               

               Cow position:
               chr28:13889637-13889892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-257
               

               Cow position:
               chr28:19295669-19295415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               1-258
               

               Cow position:
               chr28:3144194-3143940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               215, 33
               

               Conread position:
               1-258
               

               Cow position:
               chr28:3914403-3914657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr28:4022075-4022331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               63, 67
               

               Conread position:
               1-258
               

               Cow position:
               chr28:4215063-4215321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-258
               

               Cow position:
               chr28:5212284-5212542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr28:5270577-5270835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr28:5553233-5552997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               98, 64
               

               Conread position:
               1-258
               

               Cow position:
               chr28:6960189-6960447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr28:7549369-7549114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr28:7746029-7746294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 95
               

               Conread position:
               1-258
               

               Cow position:
               chr28:9285671-9285428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               213, 43
               

               Conread position:
               1-258
               

               Cow position:
               chr28:9848634-9848378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               88, 99
               

               Conread position:
               1-258
               

               Cow position:
               chr28:10669267-10669521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               214, 167
               

               Conread position:
               1-258
               

               Cow position:
               chr28:10682129-10681877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               49, 117
               

               Conread position:
               1-258
               

               Cow position:
               chr28:11047269-11047537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr28:11451782-11451517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               46, 161
               

               Conread position:
               1-258
               

               Cow position:
               chr28:12457849-12458107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr28:12758814-12758556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               82, 97
               

               Conread position:
               1-258
               

               Cow position:
               chr28:14657389-14657648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               1-258
               

               Cow position:
               chr28:14933655-14933912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr28:14997757-14998010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               214, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr28:15272566-15272316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               204, 24
               

               Conread position:
               1-258
               

               Cow position:
               chr28:17638171-17637921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 33
               

               Conread position:
               1-258
               

               Cow position:
               chr28:17738386-17738128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr28:18790705-18790960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               212, 33
               

               Conread position:
               1-258
               

               Cow position:
               chr28:19515699-19515442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr28:20124482-20124729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               213, 33
               

               Conread position:
               1-258
               

               Cow position:
               chr28:21354917-21355169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr28:21380574-21380824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 73
               

               Conread position:
               1-258
               

               Cow position:
               chr28:21868144-21868401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               1-258
               

               Cow position:
               chr28:22322958-22323214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               214, 155
               

               Conread position:
               1-258
               

               Cow position:
               chr28:23530557-23530815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               87, 119
               

               Conread position:
               1-258
               

               Cow position:
               chr28:23616095-23616354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr28:23793626-23793361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               1-258
               

               Cow position:
               chr28:24603872-24604122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr28:26419053-26418796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               98, 45
               

               Conread position:
               1-258
               

               Cow position:
               chr28:26614588-26614830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               215, 84
               

               Conread position:
               1-258
               

               Cow position:
               chr28:26727719-26727471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               147, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr28:26781776-26782034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr28:27684013-27683755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr28:30098824-30099082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr28:30210007-30209750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               201, 165
               

               Conread position:
               1-258
               

               Cow position:
               chr28:31648770-31649020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               213, 27
               

               Conread position:
               1-258
               

               Cow position:
               chr28:34598268-34598526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-259
               

               Cow position:
               chr28:5931040-5931299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               46, 156
               

               Conread position:
               1-259
               

               Cow position:
               chr28:20538543-20538802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-260
               

               Cow position:
               chr28:1957311-1957570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               210, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr28:5335566-5335308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               211, 30
               

               Conread position:
               1-260
               

               Cow position:
               chr28:5637999-5638258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               187, 177
               

               Conread position:
               1-260
               

               Cow position:
               chr28:6775940-6775681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr28:8111300-8111557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               201, 18
               

               Conread position:
               1-260
               

               Cow position:
               chr28:9276837-9277095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               210, 195
               

               Conread position:
               1-260
               

               Cow position:
               chr28:10563342-10563598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-260
               

               Cow position:
               chr28:12117292-12117032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               79, 252
               

               Conread position:
               1-260
               

               Cow position:
               chr28:14675200-14675457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-260
               

               Cow position:
               chr28:15605471-15605730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr28:15916580-15916321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr28:20966714-20966455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr28:22040335-22040076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr28:23685986-23686245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr28:25683261-25683002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr28:28098423-28098683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-260
               

               Cow position:
               chr28:30293894-30293639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               200, 33
               

               Conread position:
               1-260
               

               Cow position:
               chr28:33689457-33689716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr28:34731679-34731938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               37, 32
               

               Conread position:
               1-263
               

               Cow position:
               chr28:21363451-21363695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr28:1811052-1810787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               201, 77
               

               Conread position:
               1-265
               

               Cow position:
               chr28:5361322-5361054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-265
               

               Cow position:
               chr28:10473901-10474163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-265
               

               Cow position:
               chr28:10744898-10745168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               52, 167
               

               Conread position:
               1-265
               

               Cow position:
               chr28:11827179-11827444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 84
               

               Conread position:
               1-265
               

               Cow position:
               chr28:11931693-11931425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr28:24606118-24605854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-266
               

               Cow position:
               chr28:16770285-16770538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               185, 93
               

               Conread position:
               1-267
               

               Cow position:
               chr28:2422657-2422922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               168, 185
               

               Conread position:
               1-267
               

               Cow position:
               chr28:6319215-6318948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               181, 117
               

               Conread position:
               1-267
               

               Cow position:
               chr28:18096670-18096934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-267
               

               Cow position:
               chr28:25411566-25411832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               197, 251
               

               Conread position:
               1-268
               

               Cow position:
               chr28:21767203-21766932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-270
               

               Cow position:
               chr28:9182816-9183086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-271
               

               Cow position:
               chr28:22304550-22304807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               161, 33
               

               Conread position:
               1-272
               

               Cow position:
               chr28:5684397-5684668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               94, 181
               

               Conread position:
               1-272
               

               Cow position:
               chr28:19222452-19222188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 77
               

               Conread position:
               1-272
               

               Cow position:
               chr28:19222901-19222634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               199, 56
               

               Conread position:
               1-272
               

               Cow position:
               chr28:23675841-23676101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               217, 33
               

               Conread position:
               1-273
               

               Cow position:
               chr28:9426649-9426388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               198, 126
               

               Conread position:
               1-273
               

               Cow position:
               chr28:14150931-14151197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               204, 27
               

               Conread position:
               1-273
               

               Cow position:
               chr28:24671966-24672228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               214, 134
               

               Conread position:
               1-275
               

               Cow position:
               chr28:2124132-2124394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               203, 77
               

               Conread position:
               1-275
               

               Cow position:
               chr28:15007855-15008127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 35
               

               Conread position:
               1-275
               

               Cow position:
               chr28:16085018-16085289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 60
               

               Conread position:
               1-275
               

               Cow position:
               chr28:34878277-34878004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               200, 33
               

               Conread position:
               1-276
               

               Cow position:
               chr28:12049020-12048737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 91
               

               Conread position:
               1-276
               

               Cow position:
               chr28:18717432-18717156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               83, 57
               

               Conread position:
               1-276
               

               Cow position:
               chr28:26269024-26269296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               1-277
               

               Cow position:
               chr28:7590490-7590214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               1-289
               

               Cow position:
               chr28:4880571-4880288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               218, 158
               

               Conread position:
               1-291
               

               Cow position:
               chr28:4587789-4588080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               66, 81
               

               Conread position:
               1-291
               

               Cow position:
               chr28:7698284-7697998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               214, 24
               

               Conread position:
               1-291
               

               Cow position:
               chr28:10606919-10606645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               200, 60
               

               Conread position:
               1-291
               

               Cow position:
               chr28:20312967-20313257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               1-291
               

               Cow position:
               chr28:21598560-21598272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               214, 76
               

               Conread position:
               1-295
               

               Cow position:
               chr28:23839905-23840187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               257, 33
               

               Conread position:
               1-310
               

               Cow position:
               chr28:5904429-5904735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               214, 77
               

               Conread position:
               1-314
               

               Cow position:
               chr28:16686727-16687029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               280, 49
               

               Conread position:
               2-125
               

               Cow position:
               chr28:22330009-22330127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-131
               

               Cow position:
               chr28:3202833-3202960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               2-143
               

               Cow position:
               chr28:27995011-27995151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               2-146
               

               Cow position:
               chr28:22344400-22344542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               2-160
               

               Cow position:
               chr28:16925517-16925359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               131
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-166
               

               Cow position:
               chr28:17613056-17613220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-192
               

               Cow position:
               chr28:23254096-23253917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               2-201
               

               Cow position:
               chr28:13356888-13356701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-203
               

               Cow position:
               chr28:15258738-15258542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-204
               

               Cow position:
               chr28:33234781-33234983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-204
               

               Cow position:
               chr28:34579726-34579524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               2-204
               

               Cow position:
               chr28:34581421-34581219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               2-205
               

               Cow position:
               chr28:25334713-25334917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               2-206
               

               Cow position:
               chr28:21104150-21103951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-206
               

               Cow position:
               chr28:25563772-25563974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               2-208
               

               Cow position:
               chr28:8911526-8911319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 123
               

               Conread position:
               2-212
               

               Cow position:
               chr28:11690511-11690296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               2-215
               

               Cow position:
               chr28:9126495-9126283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 206
               

               Conread position:
               2-226
               

               Cow position:
               chr28:1943348-1943121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               2-248
               

               Cow position:
               chr28:4188223-4188465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               2-249
               

               Cow position:
               chr28:16919467-16919223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               77, 32
               

               Conread position:
               2-251
               

               Cow position:
               chr28:15590690-15590924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               230, 46
               

               Conread position:
               2-251
               

               Cow position:
               chr28:16364277-16364028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               96, 148
               

               Conread position:
               2-258
               

               Cow position:
               chr28:4282798-4282544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 160
               

               Conread position:
               2-258
               

               Cow position:
               chr28:8787244-8787485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               208, 91
               

               Conread position:
               2-258
               

               Cow position:
               chr28:13267475-13267732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               2-258
               

               Cow position:
               chr28:13371474-13371227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               213, 93
               

               Conread position:
               2-265
               

               Cow position:
               chr28:17130911-17130649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               97, 23
               

               Conread position:
               2-275
               

               Cow position:
               chr28:18139762-18139491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               50, 145
               

               Conread position:
               2-288
               

               Cow position:
               chr28:4308204-4307925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               200, 96
               

               Conread position:
               2-292
               

               Cow position:
               chr28:5826642-5826935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               171, 140
               

               Conread position:
               3-144
               

               Cow position:
               chr28:3740547-3740688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-149
               

               Cow position:
               chr28:10762370-10762514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               3-156
               

               Cow position:
               chr28:3427166-3427016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               3-219
               

               Cow position:
               chr28:5371213-5371000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               3-219
               

               Cow position:
               chr28:25056666-25056877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               74, 149
               

               Conread position:
               3-225
               

               Cow position:
               chr28:29035701-29035479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               3-234
               

               Cow position:
               chr28:6047741-6047973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               96, 86
               

               Conread position:
               3-249
               

               Cow position:
               chr28:32785274-32785032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               173, 153
               

               Conread position:
               3-250
               

               Cow position:
               chr28:11585513-11585267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               3-250
               

               Cow position:
               chr28:11687330-11687091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               211, 48
               

               Conread position:
               3-251
               

               Cow position:
               chr28:21129428-21129187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 102
               

               Conread position:
               3-257
               

               Cow position:
               chr28:661808-662053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 103
               

               Conread position:
               3-258
               

               Cow position:
               chr28:3187594-3187338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               96, 86
               

               Conread position:
               3-258
               

               Cow position:
               chr28:12430304-12430553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               80, 60
               

               Conread position:
               3-258
               

               Cow position:
               chr28:28163791-28164032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               212, 57
               

               Conread position:
               3-265
               

               Cow position:
               chr28:15375127-15374866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               212, 31
               

               Conread position:
               3-272
               

               Cow position:
               chr28:17287923-17288181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               136, 28
               

               Conread position:
               3-275
               

               Cow position:
               chr28:8347417-8347697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               75, 160
               

               Conread position:
               3-316
               

               Cow position:
               chr28:34443069-34442749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               169, 281
               

               Conread position:
               3-317
               

               Cow position:
               chr28:12946640-12946953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               151, 10
               

               Conread position:
               4-228
               

               Cow position:
               chr28:8066479-8066702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               198, 214
               

               Conread position:
               4-258
               

               Cow position:
               chr28:2279970-2279720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               75, 147
               

               Conread position:
               4-258
               

               Cow position:
               chr28:23480565-23480312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               144, 42
               

               Conread position:
               4-258
               

               Cow position:
               chr28:25249052-25249299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 37
               

               Conread position:
               4-258
               

               Cow position:
               chr28:32305302-32305046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               4-258
               

               Cow position:
               chr28:34082322-34082071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               199, 65
               

               Conread position:
               4-269
               

               Cow position:
               chr28:25701164-25700918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               5-125
               

               Cow position:
               chr28:10980837-10980957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-204
               

               Cow position:
               chr28:15998569-15998370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-235
               

               Cow position:
               chr28:3161380-3161147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 29
               

               Conread position:
               5-248
               

               Cow position:
               chr28:20760227-20759984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               210, 196
               

               Conread position:
               5-250
               

               Cow position:
               chr28:12651300-12651545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               5-255
               

               Cow position:
               chr28:30327387-30327148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 88
               

               Conread position:
               5-258
               

               Cow position:
               chr28:17392517-17392771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               94, 84
               

               Conread position:
               5-258
               

               Cow position:
               chr28:33640515-33640773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               5-265
               

               Cow position:
               chr28:7512893-7512631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               6-125
               

               Cow position:
               chr28:25476511-25476630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr28:10303615-10303809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-201
               

               Cow position:
               chr28:10295890-10296082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               6-218
               

               Cow position:
               chr28:2814801-2814594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               6-218
               

               Cow position:
               chr28:11356226-11356013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               6-275
               

               Cow position:
               chr28:10879472-10879732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               34, 133
               

               Conread position:
               6-276
               

               Cow position:
               chr28:7684979-7684716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               209, 68
               

               Conread position:
               7-160
               

               Cow position:
               chr28:8740304-8740457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               7-185
               

               Cow position:
               chr28:23281521-23281345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               108, 151
               

               Conread position:
               7-203
               

               Cow position:
               chr28:11602044-11601850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               146, 71
               

               Conread position:
               7-220
               

               Cow position:
               chr28:16250345-16250134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 88
               

               Conread position:
               7-249
               

               Cow position:
               chr28:22371977-22371740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               207, 89
               

               Conread position:
               7-275
               

               Cow position:
               chr28:5768892-5769164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 157
               

               Conread position:
               7-276
               

               Cow position:
               chr28:16401597-16401865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               9-228
               

               Cow position:
               chr28:19173832-19173615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               193, 40
               

               Conread position:
               9-258
               

               Cow position:
               chr28:786613-786863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               9-258
               

               Cow position:
               chr28:23008027-23007788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               75, 139
               

               Conread position:
               10-249
               

               Cow position:
               chr28:6486300-6486531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               10-291
               

               Cow position:
               chr28:31987306-31987592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               7, 61
               

               Conread position:
               11-249
               

               Cow position:
               chr28:14234680-14234910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               203, 38
               

               Conread position:
               11-259
               

               Cow position:
               chr28:6546687-6546435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               12-205
               

               Cow position:
               chr28:16350336-16350154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               13-204
               

               Cow position:
               chr28:16857707-16857516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-205
               

               Cow position:
               chr28:22351196-22351388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               42, 151
               

               Conread position:
               13-228
               

               Cow position:
               chr28:1172968-1172754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               189, 205
               

               Conread position:
               13-249
               

               Cow position:
               chr28:24966093-24966327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               101, 66
               

               Conread position:
               13-276
               

               Cow position:
               chr28:22254241-22253976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               14-289
               

               Cow position:
               chr28:9390659-9390385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 145
               

               Conread position:
               15-234
               

               Cow position:
               chr28:15063632-15063413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               114, 64
               

               Conread position:
               15-235
               

               Cow position:
               chr28:16388353-16388554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               195, 19
               

               Conread position:
               15-258
               

               Cow position:
               chr28:34852488-34852732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               15-276
               

               Cow position:
               chr28:7228677-7228418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 69
               

               Conread position:
               16-277
               

               Cow position:
               chr28:5817555-5817809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               201, 85
               

               Conread position:
               17-275
               

               Cow position:
               chr28:31110296-31110038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               81, 71
               

               Conread position:
               18-192
               

               Cow position:
               chr28:5837822-5837993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               18-258
               

               Cow position:
               chr28:26743332-26743570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               189, 60
               

               Conread position:
               19-234
               

               Cow position:
               chr28:8963238-8963450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               167, 15
               

               Conread position:
               20-168
               

               Cow position:
               chr28:15965638-15965490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-168
               

               Cow position:
               chr28:18559020-18558872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-215
               

               Cow position:
               chr28:13412118-13411922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 68
               

               Conread position:
               21-219
               

               Cow position:
               chr28:7606947-7607138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               21-275
               

               Cow position:
               chr28:22171006-22170750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               22-249
               

               Cow position:
               chr28:757549-757329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               150, 25
               

               Conread position:
               23-210
               

               Cow position:
               chr28:8103674-8103490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               23-273
               

               Cow position:
               chr28:30303478-30303230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               186, 61
               

               Conread position:
               24-235
               

               Cow position:
               chr28:2819474-2819688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               179, 134
               

               Conread position:
               25-258
               

               Cow position:
               chr28:11426827-11426596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               188, 9
               

               Conread position:
               25-260
               

               Cow position:
               chr28:28471972-28472207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               177, 227
               

               Conread position:
               28-250
               

               Cow position:
               chr28:3246058-3246269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               185, 19
               

               Conread position:
               28-258
               

               Cow position:
               chr28:26784748-26784519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               29-204
               

               Cow position:
               chr28:31872026-31871857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               29-241
               

               Cow position:
               chr28:29199448-29199655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               29-258
               

               Cow position:
               chr28:7144511-7144735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               186, 28
               

               Conread position:
               30-168
               

               Cow position:
               chr28:1537425-1537566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               31-205
               

               Cow position:
               chr28:23111657-23111831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-220
               

               Cow position:
               chr28:97405-97215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               31-249
               

               Cow position:
               chr28:5129005-5128789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               9, 58
               

               Conread position:
               33-206
               

               Cow position:
               chr28:9177028-9176858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               33-273
               

               Cow position:
               chr28:27218047-27218288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               177, 13
               

               Conread position:
               34-275
               

               Cow position:
               chr28:15263998-15263751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               36-204
               

               Cow position:
               chr28:11505741-11505909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               37-204
               

               Cow position:
               chr28:30900165-30899996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               37-215
               

               Cow position:
               chr28:32275073-32275252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               37-235
               

               Cow position:
               chr28:16450965-16450780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               177, 11
               

               Conread position:
               37-258
               

               Cow position:
               chr28:23410596-23410379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               16, 118
               

               Conread position:
               37-275
               

               Cow position:
               chr28:18354590-18354358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 43
               

               Conread position:
               41-258
               

               Cow position:
               chr28:16204601-16204383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               42-258
               

               Cow position:
               chr28:34229963-34230177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               172, 116
               

               Conread position:
               43-258
               

               Cow position:
               chr28:8382068-8382284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               44-204
               

               Cow position:
               chr28:13786896-13787056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               45-202
               

               Cow position:
               chr28:3408480-3408324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               46-258
               

               Cow position:
               chr28:16253117-16252914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               168, 33
               

               Conread position:
               46-260
               

               Cow position:
               chr28:24887116-24887330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               156, 206
               

               Conread position:
               46-265
               

               Cow position:
               chr28:26533280-26533505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               46-272
               

               Cow position:
               chr28:24996851-24996626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               46-275
               

               Cow position:
               chr28:16244021-16243793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               94, 106
               

               Conread position:
               46-276
               

               Cow position:
               chr28:11380305-11380076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               175, 155
               

               Conread position:
               46-289
               

               Cow position:
               chr28:17029979-17029738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               47-265
               

               Cow position:
               chr28:13176940-13176728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               211, 161
               

               Conread position:
               47-275
               

               Cow position:
               chr28:4841658-4841433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               47-275
               

               Cow position:
               chr28:26719099-26719316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               160, 50
               

               Conread position:
               48-258
               

               Cow position:
               chr28:3493044-3492839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               48-258
               

               Cow position:
               chr28:10172674-10172468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               49-203
               

               Cow position:
               chr28:1099901-1099754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               49-258
               

               Cow position:
               chr28:19026262-19026066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               160, 86
               

               Conread position:
               49-258
               

               Cow position:
               chr28:25070857-25071070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               123, 195
               

               Conread position:
               49-258
               

               Cow position:
               chr28:25424562-25424354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 36
               

               Conread position:
               50-255
               

               Cow position:
               chr28:6861695-6861897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               50-272
               

               Cow position:
               chr28:21502137-21502356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               150, 29
               

               Conread position:
               51-249
               

               Cow position:
               chr28:16370332-16370139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               51-258
               

               Cow position:
               chr28:18934195-18934398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 111
               

               Conread position:
               51-273
               

               Cow position:
               chr28:22484991-22485206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               151, 44
               

               Conread position:
               51-275
               

               Cow position:
               chr28:30608438-30608224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               52-205
               

               Cow position:
               chr28:32813255-32813107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               53-250
               

               Cow position:
               chr28:2862606-2862803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               161, 148
               

               Conread position:
               53-258
               

               Cow position:
               chr28:5773387-5773582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               53-258
               

               Cow position:
               chr28:33051765-33051974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               98, 165
               

               Conread position:
               54-273
               

               Cow position:
               chr28:4057732-4057945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               203, 70
               

               Conread position:
               56-219
               

               Cow position:
               chr28:8348905-8348743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 100
               

               Conread position:
               56-235
               

               Cow position:
               chr28:5236852-5236675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               158, 41
               

               Conread position:
               56-249
               

               Cow position:
               chr28:4938586-4938768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               56-258
               

               Cow position:
               chr28:3078930-3078737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               154, 103
               

               Conread position:
               56-258
               

               Cow position:
               chr28:13242076-13241882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               158, 103
               

               Conread position:
               56-258
               

               Cow position:
               chr28:16386758-16386562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               151, 95
               

               Conread position:
               56-260
               

               Cow position:
               chr28:16354872-16354658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 28
               

               Conread position:
               57-213
               

               Cow position:
               chr28:13936165-13936316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               57-258
               

               Cow position:
               chr28:19080099-19079897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               151, 87
               

               Conread position:
               57-273
               

               Cow position:
               chr28:22345768-22345983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               157, 51
               

               Conread position:
               58-258
               

               Cow position:
               chr28:2905330-2905521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               156, 101
               

               Conread position:
               58-275
               

               Cow position:
               chr28:8408486-8408700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               59-236
               

               Cow position:
               chr28:24646291-24646468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               156, 151
               

               Conread position:
               59-272
               

               Cow position:
               chr28:2898746-2898961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 38
               

               Conread position:
               60-249
               

               Cow position:
               chr28:10529731-10529547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               149, 98
               

               Conread position:
               60-259
               

               Cow position:
               chr28:4914350-4914149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               145, 194
               

               Conread position:
               61-209
               

               Cow position:
               chr28:22583385-22583529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               62-225
               

               Cow position:
               chr28:7723642-7723478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               63-250
               

               Cow position:
               chr28:14649102-14649286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               64-205
               

               Cow position:
               chr28:7389081-7389220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               66-204
               

               Cow position:
               chr28:25498746-25498608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               71-258
               

               Cow position:
               chr28:5658317-5658497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               74-258
               

               Cow position:
               chr28:11884757-11884574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               135, 64
               

               Conread position:
               74-273
               

               Cow position:
               chr28:26340102-26340306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               131, 152
               

               Conread position:
               77-275
               

               Cow position:
               chr28:5144755-5144554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               78-235
               

               Cow position:
               chr28:25282975-25283130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               78-275
               

               Cow position:
               chr28:3077762-3077957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               132, 81
               
Show alignments to all cow chromosomes.
Conread position:	1-82
Cow position:	chr28:789999-789918 (view UCSC Genome Browser custom track)
Alignm length:	82
Alignm identity:	73
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-87
Cow position:	chr28:7005976-7006062 (view UCSC Genome Browser custom track)
Alignm length:	87
Alignm identity:	75
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-89
Cow position:	chr28:746863-746951 (view UCSC Genome Browser custom track)
Alignm length:	89
Alignm identity:	76
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-93
Cow position:	chr28:5145026-5144934 (view UCSC Genome Browser custom track)
Alignm length:	94
Alignm identity:	82
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	59, 79
Conread position:	1-112
Cow position:	chr28:10589336-10589225 (view UCSC Genome Browser custom track)
Alignm length:	112
Alignm identity:	98
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	0, 0
Conread position:	1-115
Cow position:	chr28:3474665-3474779 (view UCSC Genome Browser custom track)
Alignm length:	115
Alignm identity:	93
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	0, 0
Conread position:	1-123
Cow position:	chr28:8972665-8972787 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	94
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-125
Cow position:	chr28:6484581-6484457 (view UCSC Genome Browser custom track)
Alignm length:	125
Alignm identity:	95
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-126
Cow position:	chr28:5110663-5110538 (view UCSC Genome Browser custom track)
Alignm length:	126
Alignm identity:	96
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-132
Cow position:	chr28:2132282-2132153 (view UCSC Genome Browser custom track)
Alignm length:	132
Alignm identity:	100
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	91, 0
Conread position:	1-134
Cow position:	chr28:12342675-12342541 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	103
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	29, 88
Conread position:	1-140
Cow position:	chr28:8290428-8290569 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	111
Alignm E-value:	9e-28
Alignm gaps (pig, cow):	84, 0
Conread position:	1-141
Cow position:	chr28:5747758-5747618 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	110
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	0, 0
Conread position:	1-143
Cow position:	chr28:3000918-3000776 (view UCSC Genome Browser custom track)
Alignm length:	146
Alignm identity:	113
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	118, 74
Conread position:	1-144
Cow position:	chr28:7009313-7009174 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	112
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	133, 40
Conread position:	1-148
Cow position:	chr28:25399583-25399729 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	115
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	54, 21
Conread position:	1-149
Cow position:	chr28:12593328-12593474 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	114
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	83, 0
Conread position:	1-151
Cow position:	chr28:7443752-7443902 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	115
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	0, 0
Conread position:	1-156
Cow position:	chr28:1316097-1315944 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	130
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	52, 0
Conread position:	1-157
Cow position:	chr28:10616257-10616103 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	128
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	45, 0