Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8016F16.3
        

               Conread position:
               1-83
               

               Cow position:
               chr3:34973358-34973276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               74
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-86
               

               Cow position:
               chr3:10244981-10245066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-86
               

               Cow position:
               chr3:34041228-34041313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               75
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-86
               

               Cow position:
               chr3:34151384-34151299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-86
               

               Cow position:
               chr3:48994752-48994837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               75
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-86
               

               Cow position:
               chr3:51256771-51256856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               75
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-86
               

               Cow position:
               chr3:67196496-67196411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-86
               

               Cow position:
               chr3:69273728-69273813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-86
               

               Cow position:
               chr3:82398288-82398371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-87
               

               Cow position:
               chr3:6068438-6068524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               77
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-90
               

               Cow position:
               chr3:65079257-65079168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-93
               

               Cow position:
               chr3:35074018-35074110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               1-103
               

               Cow position:
               chr3:11123109-11123211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-112
               

               Cow position:
               chr3:8591676-8591570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-116
               

               Cow position:
               chr3:24935019-24935131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 78
               

               Conread position:
               1-120
               

               Cow position:
               chr3:15377760-15377641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-122
               

               Cow position:
               chr3:30355889-30356009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-123
               

               Cow position:
               chr3:34819556-34819434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-123
               

               Cow position:
               chr3:77565144-77565266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr3:12932599-12932723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr3:61922404-61922528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-127
               

               Cow position:
               chr3:22196620-22196494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-127
               

               Cow position:
               chr3:61174975-61175101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-130
               

               Cow position:
               chr3:4319333-4319205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr3:26931225-26931092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr3:37646727-37646864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr3:55319130-55319263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr3:67388843-67388976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr3:53429224-53429086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               1-142
               

               Cow position:
               chr3:50069443-50069584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               1-143
               

               Cow position:
               chr3:26981020-26981157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr3:76188358-76188501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               1-146
               

               Cow position:
               chr3:13513070-13512928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr3:18758572-18758428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr3:20562045-20561901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr3:26832963-26832827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr3:41679957-41680104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr3:63688098-63687954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr3:64015338-64015193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr3:16290902-16290764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:3257351-3257203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:10958561-10958417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:20746916-20746767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:21112956-21112810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:31422282-31422134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-149
               

               Cow position:
               chr3:35299338-35299486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:37020412-37020265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:37982456-37982308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:43028713-43028565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:55010488-55010345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               126, 38
               

               Conread position:
               1-149
               

               Cow position:
               chr3:59798918-59799066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               138, 131
               

               Conread position:
               1-149
               

               Cow position:
               chr3:62623969-62623824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr3:76614307-76614454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               127
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:1760323-1760474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:3086263-3086414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-152
               

               Cow position:
               chr3:12027943-12028094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:20388638-20388487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:20804899-20805050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:27515920-27516070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:47758541-47758692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:63177176-63177326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               1-152
               

               Cow position:
               chr3:64216403-64216558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:64536878-64536729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:68514885-68514735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:73926501-73926354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:77892279-77892128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr3:81374419-81374269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-153
               

               Cow position:
               chr3:78520878-78521030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr3:38096733-38096886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr3:42670988-42671139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr3:59473780-59473931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr3:59604535-59604688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr3:70701661-70701816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               123, 129
               

               Conread position:
               1-157
               

               Cow position:
               chr3:6799338-6799180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 21
               

               Conread position:
               1-157
               

               Cow position:
               chr3:49793077-49793229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               1-157
               

               Cow position:
               chr3:60618290-60618448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr3:54766787-54766941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 68
               

               Conread position:
               1-159
               

               Cow position:
               chr3:35488484-35488325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr3:18815321-18815480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr3:23072201-23072360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr3:55110179-55110021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr3:83437438-83437280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr3:6754517-6754677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr3:11254488-11254325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 97
               

               Conread position:
               1-162
               

               Cow position:
               chr3:52486946-52487107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-164
               

               Cow position:
               chr3:32485412-32485576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               1-164
               

               Cow position:
               chr3:59117941-59117779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-164
               

               Cow position:
               chr3:62784914-62784755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1-165
               

               Cow position:
               chr3:11031282-11031112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-165
               

               Cow position:
               chr3:76000126-75999962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-165
               

               Cow position:
               chr3:79272126-79271964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 97
               

               Conread position:
               1-167
               

               Cow position:
               chr3:21594114-21594280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr3:53787563-53787397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:580012-580179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:15089598-15089765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:17331432-17331599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:20843737-20843570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:30301822-30301989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:37150574-37150409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:37972851-37973014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:42187316-42187486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 121
               

               Conread position:
               1-168
               

               Cow position:
               chr3:44335219-44335386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr3:49564849-49565016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               1-168
               

               Cow position:
               chr3:65672571-65672738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               157, 162
               

               Conread position:
               1-168
               

               Cow position:
               chr3:82314943-82314776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               1-170
               

               Cow position:
               chr3:43524907-43524738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr3:84598389-84598220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr3:56335849-56335679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr3:66014069-66014240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr3:20997308-20997146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-174
               

               Cow position:
               chr3:7661553-7661725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-174
               

               Cow position:
               chr3:80793619-80793446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr3:3553212-3553387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr3:76155380-76155549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr3:1622933-1623111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr3:3372353-3372175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr3:20476331-20476509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr3:30394950-30394774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr3:33268660-33268485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-179
               

               Cow position:
               chr3:42885345-42885523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr3:53407589-53407411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-180
               

               Cow position:
               chr3:35433200-35433376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr3:45184177-45184003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-183
               

               Cow position:
               chr3:56298211-56298393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr3:71488655-71488473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr3:28764590-28764406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr3:29172047-29172232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               172, 158
               

               Conread position:
               1-188
               

               Cow position:
               chr3:3884362-3884174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               157, 77
               

               Conread position:
               1-188
               

               Cow position:
               chr3:81057694-81057508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr3:22353808-22354004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 81
               

               Conread position:
               1-191
               

               Cow position:
               chr3:24763644-24763454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               89, 76
               

               Conread position:
               1-192
               

               Cow position:
               chr3:41053480-41053664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1-194
               

               Cow position:
               chr3:76901858-76902048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               157, 76
               

               Conread position:
               1-195
               

               Cow position:
               chr3:11447665-11447858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               169, 54
               

               Conread position:
               1-196
               

               Cow position:
               chr3:174598-174788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr3:23598206-23598010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr3:69766572-69766377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               175, 77
               

               Conread position:
               1-199
               

               Cow position:
               chr3:18887243-18887443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr3:60701427-60701221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 39
               

               Conread position:
               1-200
               

               Cow position:
               chr3:9435626-9435825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr3:15530466-15530660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr3:58060953-58060754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr3:59344908-59345109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr3:26474821-26475025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 111
               

               Conread position:
               1-201
               

               Cow position:
               chr3:40284516-40284316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-201
               

               Cow position:
               chr3:59179073-59179269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr3:83988148-83988340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr3:28597201-28597003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr3:40345064-40345266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               107, 139
               

               Conread position:
               1-203
               

               Cow position:
               chr3:54573106-54572904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr3:55985334-55985536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               157, 164
               

               Conread position:
               1-203
               

               Cow position:
               chr3:69207454-69207260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr3:74849374-74849177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:470766-470559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:2594788-2594991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:2833706-2833503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:6193085-6192882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:6402961-6403159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:6442899-6443102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-204
               

               Cow position:
               chr3:13275386-13275183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:14438157-14437954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-204
               

               Cow position:
               chr3:17263159-17262956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:19711651-19711448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               172, 116
               

               Conread position:
               1-204
               

               Cow position:
               chr3:19827630-19827430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:19977790-19977587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:24557743-24557540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:28879389-28879592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:29461352-29461149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:30859431-30859634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:34016406-34016609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:34503306-34503103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:35043992-35044195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:35805645-35805848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:37580660-37580451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:37637312-37637109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:38748213-38748417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:40049718-40049921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:40520107-40519905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:41018478-41018275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:42930007-42929806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:46349936-46350139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:46683666-46683868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 33
               

               Conread position:
               1-204
               

               Cow position:
               chr3:48043112-48043315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:49530954-49530751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:50941180-50940977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:52045187-52044984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:56329021-56329224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:56375965-56376171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:59342006-59342209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:60054640-60054845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               1-204
               

               Cow position:
               chr3:62824819-62824620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:64294341-64294544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               1-204
               

               Cow position:
               chr3:64654467-64654670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:70840481-70840282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:72131637-72131431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 182
               

               Conread position:
               1-204
               

               Cow position:
               chr3:77753759-77753962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:79921427-79921224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr3:82473715-82473920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               58, 161
               

               Conread position:
               1-205
               

               Cow position:
               chr3:15685246-15685050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr3:32772900-32773098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               134, 73
               

               Conread position:
               1-205
               

               Cow position:
               chr3:41157629-41157422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 175
               

               Conread position:
               1-205
               

               Cow position:
               chr3:41818424-41818228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr3:42563119-42563320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 33
               

               Conread position:
               1-205
               

               Cow position:
               chr3:51147001-51146798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr3:58286231-58286034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr3:60389308-60389499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr3:65771650-65771446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr3:70754032-70754233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               1-205
               

               Cow position:
               chr3:75143368-75143168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:2537921-2538117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:3776698-3776903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 167
               

               Conread position:
               1-206
               

               Cow position:
               chr3:10244492-10244697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:11785183-11785388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-206
               

               Cow position:
               chr3:12979192-12979390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:18179414-18179617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:32363909-32363703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:34096285-34096091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:35612975-35613180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:47272047-47271837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               127, 33
               

               Conread position:
               1-206
               

               Cow position:
               chr3:48530302-48530502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:52148012-52147811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:55107444-55107240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               86, 57
               

               Conread position:
               1-206
               

               Cow position:
               chr3:55301086-55300886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:67044429-67044232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               1-206
               

               Cow position:
               chr3:68704956-68704752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               178, 155
               

               Conread position:
               1-206
               

               Cow position:
               chr3:75038009-75037804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr3:76091952-76092153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr3:7154974-7154768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr3:47737222-47737023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr3:10050732-10050940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr3:37599752-37599552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr3:41396200-41396407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr3:76865264-76865471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr3:77472168-77471961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr3:49768978-49769186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr3:51869892-51870100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-209
               

               Cow position:
               chr3:54346559-54346353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               193, 48
               

               Conread position:
               1-211
               

               Cow position:
               chr3:2901464-2901258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               1-211
               

               Cow position:
               chr3:6433959-6434167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               189, 137
               

               Conread position:
               1-211
               

               Cow position:
               chr3:19109402-19109607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               1-211
               

               Cow position:
               chr3:49907202-49906990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               170, 155
               

               Conread position:
               1-214
               

               Cow position:
               chr3:5851263-5851052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               147, 77
               

               Conread position:
               1-214
               

               Cow position:
               chr3:36013990-36014204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-214
               

               Cow position:
               chr3:48811321-48811108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               205, 96
               

               Conread position:
               1-214
               

               Cow position:
               chr3:51033009-51033219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-214
               

               Cow position:
               chr3:52722341-52722128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               47, 101
               

               Conread position:
               1-214
               

               Cow position:
               chr3:76411393-76411173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 128
               

               Conread position:
               1-215
               

               Cow position:
               chr3:470272-470058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:6262730-6262945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:8331109-8331324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:14144748-14144533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:19797270-19797055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:19881882-19882097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:20862894-20863109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:27674203-27673988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:27687530-27687315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:28668856-28668641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:30753415-30753630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:30989267-30989052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:36126317-36126532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:36802391-36802176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:37662813-37663028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:39232544-39232759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:41569127-41568912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:44352394-44352609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:46261202-46261417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:49930413-49930198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:51520234-51520019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:51666549-51666764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:55417503-55417288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:55837674-55837883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               201, 106
               

               Conread position:
               1-215
               

               Cow position:
               chr3:58026852-58026637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:58337132-58337347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr3:58912870-58913085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-217
               

               Cow position:
               chr3:8240592-8240808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               1-217
               

               Cow position:
               chr3:24823639-24823855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               205, 21
               

               Conread position:
               1-217
               

               Cow position:
               chr3:47987295-47987516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-218
               

               Cow position:
               chr3:34953318-34953535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               212, 199
               

               Conread position:
               1-218
               

               Cow position:
               chr3:48900838-48900625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               138, 112
               

               Conread position:
               1-218
               

               Cow position:
               chr3:62269508-62269291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               201, 141
               

               Conread position:
               1-219
               

               Cow position:
               chr3:7338113-7337892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               1-219
               

               Cow position:
               chr3:16619921-16619702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-219
               

               Cow position:
               chr3:25673460-25673243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               144, 11
               

               Conread position:
               1-219
               

               Cow position:
               chr3:42489652-42489429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               1-219
               

               Cow position:
               chr3:43528573-43528357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               210, 158
               

               Conread position:
               1-219
               

               Cow position:
               chr3:79074921-79074702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               1-220
               

               Cow position:
               chr3:3596078-3595858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr3:29560253-29560033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr3:82618055-82618267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               213, 111
               

               Conread position:
               1-221
               

               Cow position:
               chr3:8901080-8901299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 109
               

               Conread position:
               1-221
               

               Cow position:
               chr3:13118011-13118232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               1-221
               

               Cow position:
               chr3:24639254-24639473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               205, 77
               

               Conread position:
               1-221
               

               Cow position:
               chr3:27553215-27553437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               204, 79
               

               Conread position:
               1-222
               

               Cow position:
               chr3:34603648-34603871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               200, 73
               

               Conread position:
               1-225
               

               Cow position:
               chr3:2707061-2706838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               190, 117
               

               Conread position:
               1-225
               

               Cow position:
               chr3:5456581-5456358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               213, 33
               

               Conread position:
               1-225
               

               Cow position:
               chr3:38870398-38870619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-225
               

               Cow position:
               chr3:46341127-46341347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr3:48605360-48605585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr3:51014172-51013949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               213, 89
               

               Conread position:
               1-225
               

               Cow position:
               chr3:58951285-58951505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr3:65273734-65273512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 27
               

               Conread position:
               1-225
               

               Cow position:
               chr3:66624019-66624241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-225
               

               Cow position:
               chr3:78023615-78023390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:303054-303279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 132
               

               Conread position:
               1-226
               

               Cow position:
               chr3:5117094-5117320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:10448638-10448412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:13248188-13247964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:14923482-14923709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:36122007-36122233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:36595519-36595745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:36728610-36728836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:45986193-45986419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 32
               

               Conread position:
               1-226
               

               Cow position:
               chr3:47106752-47106978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:52225252-52225478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr3:81064257-81064482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               201, 89
               

               Conread position:
               1-227
               

               Cow position:
               chr3:4160940-4160714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-227
               

               Cow position:
               chr3:11186862-11186635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-227
               

               Cow position:
               chr3:39921116-39920889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr3:859399-859625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:1438395-1438621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:2573360-2573586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:2874838-2874610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               185, 219
               

               Conread position:
               1-228
               

               Cow position:
               chr3:5361958-5361732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:7696683-7696909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:7767746-7767972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:13195470-13195696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:15233330-15233105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               201, 117
               

               Conread position:
               1-228
               

               Cow position:
               chr3:16233915-16233689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               1-228
               

               Cow position:
               chr3:21155269-21155495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:26892323-26892549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:27143301-27143527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:28933736-28933962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:30609635-30609409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               210, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:32411734-32411508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:36374328-36374551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               201, 132
               

               Conread position:
               1-228
               

               Cow position:
               chr3:40205370-40205144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:43634019-43633793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:45749087-45749313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               210, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:47233567-47233341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:47720079-47720305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:49948622-49948848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               210, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:50217821-50218047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:52011602-52011828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:66374993-66375205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               200, 32
               

               Conread position:
               1-228
               

               Cow position:
               chr3:67264620-67264846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               197, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:68631690-68631464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:80741703-80741929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-228
               

               Cow position:
               chr3:83479240-83479466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-229
               

               Cow position:
               chr3:54808823-54809048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               213, 147
               

               Conread position:
               1-229
               

               Cow position:
               chr3:68878046-68877819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               1-231
               

               Cow position:
               chr3:6058922-6058693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-231
               

               Cow position:
               chr3:76172998-76172768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               199, 111
               

               Conread position:
               1-233
               

               Cow position:
               chr3:14280508-14280739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               203, 142
               

               Conread position:
               1-233
               

               Cow position:
               chr3:64375887-64375657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               1-233
               

               Cow position:
               chr3:65085766-65085998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               205, 77
               

               Conread position:
               1-233
               

               Cow position:
               chr3:68259553-68259786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 87
               

               Conread position:
               1-234
               

               Cow position:
               chr3:2364427-2364193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-234
               

               Cow position:
               chr3:3301790-3302022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:3618633-3618867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:3651399-3651162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               157, 79
               

               Conread position:
               1-234
               

               Cow position:
               chr3:5988730-5988502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               201, 78
               

               Conread position:
               1-234
               

               Cow position:
               chr3:6863961-6863728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               201, 58
               

               Conread position:
               1-234
               

               Cow position:
               chr3:6884978-6885212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:12872927-12873153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 79
               

               Conread position:
               1-234
               

               Cow position:
               chr3:13326500-13326266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               1-234
               

               Cow position:
               chr3:14863541-14863307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:17710004-17710229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               214, 33
               

               Conread position:
               1-234
               

               Cow position:
               chr3:17865259-17865485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-234
               

               Cow position:
               chr3:18052089-18051855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:18279768-18279536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               213, 155
               

               Conread position:
               1-234
               

               Cow position:
               chr3:18715820-18715586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               1-234
               

               Cow position:
               chr3:18933103-18933337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 228
               

               Conread position:
               1-234
               

               Cow position:
               chr3:20998016-20997786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-234
               

               Cow position:
               chr3:22511256-22511021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:23011184-23011412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-234
               

               Cow position:
               chr3:23992898-23993137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:24939559-24939332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               213, 32
               

               Conread position:
               1-234
               

               Cow position:
               chr3:28434744-28434510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               201, 228
               

               Conread position:
               1-234
               

               Cow position:
               chr3:30816000-30816234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:32326117-32325883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-234
               

               Cow position:
               chr3:32356583-32356816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               205, 123
               

               Conread position:
               1-234
               

               Cow position:
               chr3:32769644-32769879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:34525980-34525746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               200, 77
               

               Conread position:
               1-234
               

               Cow position:
               chr3:35342034-35341800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:36417572-36417806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:40051977-40052210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               1-234
               

               Cow position:
               chr3:40568361-40568129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 88
               

               Conread position:
               1-234
               

               Cow position:
               chr3:41057793-41058026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-234
               

               Cow position:
               chr3:42507379-42507145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:47077780-47077546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:48059758-48059524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               1-234
               

               Cow position:
               chr3:49286994-49287228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:49382616-49382845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:50960046-50960280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:56484422-56484188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:59747989-59747755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:61200622-61200856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:63945312-63945082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               25, 78
               

               Conread position:
               1-234
               

               Cow position:
               chr3:67022227-67022458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               213, 155
               

               Conread position:
               1-234
               

               Cow position:
               chr3:68869922-68869690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               201, 79
               

               Conread position:
               1-234
               

               Cow position:
               chr3:68888740-68888506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:69345153-69344924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               201, 40
               

               Conread position:
               1-234
               

               Cow position:
               chr3:79668943-79669177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:83884347-83884583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-235
               

               Cow position:
               chr3:6078671-6078436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               1-235
               

               Cow position:
               chr3:7566752-7566525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               215, 33
               

               Conread position:
               1-235
               

               Cow position:
               chr3:11418379-11418614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-235
               

               Cow position:
               chr3:13517491-13517265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               213, 110
               

               Conread position:
               1-235
               

               Cow position:
               chr3:15955208-15955444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-235
               

               Cow position:
               chr3:16752583-16752360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-235
               

               Cow position:
               chr3:17695339-17695105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               1-235
               

               Cow position:
               chr3:21302767-21302539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               78, 143
               

               Conread position:
               1-235
               

               Cow position:
               chr3:22723957-22723730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               201, 97
               

               Conread position:
               1-235
               

               Cow position:
               chr3:23735438-23735205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               1-235
               

               Cow position:
               chr3:24852923-24852691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               1-235
               

               Cow position:
               chr3:28357935-28357700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-235
               

               Cow position:
               chr3:31771364-31771592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               204, 77
               

               Conread position:
               1-235
               

               Cow position:
               chr3:36657106-36656875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               213, 158
               

               Conread position:
               1-235
               

               Cow position:
               chr3:44535934-44535702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               1-235
               

               Cow position:
               chr3:48362747-48362978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               213, 111
               

               Conread position:
               1-235
               

               Cow position:
               chr3:49119368-49119132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               98, 178
               

               Conread position:
               1-235
               

               Cow position:
               chr3:50762784-50763023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               1-235
               

               Cow position:
               chr3:55246282-55246517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-235
               

               Cow position:
               chr3:58953962-58954199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 80
               

               Conread position:
               1-235
               

               Cow position:
               chr3:68302992-68303229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               200, 222
               

               Conread position:
               1-235
               

               Cow position:
               chr3:73962015-73961786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               200, 147
               

               Conread position:
               1-235
               

               Cow position:
               chr3:77188113-77188332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               214, 33
               

               Conread position:
               1-235
               

               Cow position:
               chr3:79905248-79905024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               205, 77
               

               Conread position:
               1-236
               

               Cow position:
               chr3:20225820-20226052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               212, 158
               

               Conread position:
               1-236
               

               Cow position:
               chr3:29311185-29310952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 164
               

               Conread position:
               1-238
               

               Cow position:
               chr3:12671029-12670799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               77, 150
               

               Conread position:
               1-241
               

               Cow position:
               chr3:17222487-17222244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-242
               

               Cow position:
               chr3:6714940-6715181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               213, 238
               

               Conread position:
               1-245
               

               Cow position:
               chr3:38346867-38347107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               200, 45
               

               Conread position:
               1-245
               

               Cow position:
               chr3:48567001-48566755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               173, 33
               

               Conread position:
               1-246
               

               Cow position:
               chr3:31501019-31501256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               213, 24
               

               Conread position:
               1-246
               

               Cow position:
               chr3:57577364-57577604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               205, 9
               

               Conread position:
               1-246
               

               Cow position:
               chr3:73708723-73708952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               213, 33
               

               Conread position:
               1-247
               

               Cow position:
               chr3:14717478-14717716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               215, 78
               

               Conread position:
               1-247
               

               Cow position:
               chr3:53222984-53222733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               58, 169
               

               Conread position:
               1-248
               

               Cow position:
               chr3:46094493-46094740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 85
               

               Conread position:
               1-249
               

               Cow position:
               chr3:2075613-2075862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:4135154-4134905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:4222983-4223221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               1-249
               

               Cow position:
               chr3:4289207-4289455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               201, 55
               

               Conread position:
               1-249
               

               Cow position:
               chr3:6838864-6839113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:14213215-14213464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:14261265-14261514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:14680914-14681163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:15417299-15417548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:18670855-18671104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-249
               

               Cow position:
               chr3:20471702-20471455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               1-249
               

               Cow position:
               chr3:22676415-22676183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:24166228-24166471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               201, 50
               

               Conread position:
               1-249
               

               Cow position:
               chr3:26801917-26802162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               201, 68
               

               Conread position:
               1-249
               

               Cow position:
               chr3:27609796-27610045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:28748047-28748298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:29328101-29327840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:30352114-30352363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:30358970-30358727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-249
               

               Cow position:
               chr3:31023149-31023398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:32619179-32618930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 192
               

               Conread position:
               1-249
               

               Cow position:
               chr3:35283421-35283186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               215, 39
               

               Conread position:
               1-249
               

               Cow position:
               chr3:36861278-36861029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:42461364-42461609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               221, 150
               

               Conread position:
               1-249
               

               Cow position:
               chr3:43085270-43085515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               210, 68
               

               Conread position:
               1-249
               

               Cow position:
               chr3:44927646-44927895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:45946693-45946444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               1-249
               

               Cow position:
               chr3:48574076-48573828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               201, 71
               

               Conread position:
               1-249
               

               Cow position:
               chr3:49610383-49610134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:49975697-49975448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:51242470-51242222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               201, 167
               

               Conread position:
               1-249
               

               Cow position:
               chr3:51857683-51857932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-249
               

               Cow position:
               chr3:52149452-52149203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:60514277-60514028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:62999334-62999089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               200, 32
               

               Conread position:
               1-249
               

               Cow position:
               chr3:65179206-65179446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               201, 87
               

               Conread position:
               1-249
               

               Cow position:
               chr3:68509361-68509120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               201, 33
               

               Conread position:
               1-249
               

               Cow position:
               chr3:68716879-68716629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               1-249
               

               Cow position:
               chr3:69962045-69961806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:70731132-70731381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:73001569-73001818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr3:73305774-73306022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               180, 158
               

               Conread position:
               1-249
               

               Cow position:
               chr3:84419118-84418874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               192, 77
               

               Conread position:
               1-250
               

               Cow position:
               chr3:4461824-4461582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               213, 19
               

               Conread position:
               1-250
               

               Cow position:
               chr3:8557117-8556876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               215, 136
               

               Conread position:
               1-250
               

               Cow position:
               chr3:20663874-20663624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               1-250
               

               Cow position:
               chr3:24350794-24351033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               240, 56
               

               Conread position:
               1-250
               

               Cow position:
               chr3:26894335-26894570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               214, 33
               

               Conread position:
               1-250
               

               Cow position:
               chr3:29887760-29887513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               213, 138
               

               Conread position:
               1-250
               

               Cow position:
               chr3:29891753-29891503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               171, 120
               

               Conread position:
               1-250
               

               Cow position:
               chr3:49541098-49540852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-250
               

               Cow position:
               chr3:53149990-53150237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 148
               

               Conread position:
               1-250
               

               Cow position:
               chr3:58383626-58383875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               46, 164
               

               Conread position:
               1-250
               

               Cow position:
               chr3:64875471-64875223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               1-250
               

               Cow position:
               chr3:65019996-65020245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               58, 167
               

               Conread position:
               1-250
               

               Cow position:
               chr3:65236683-65236934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               54, 138
               

               Conread position:
               1-250
               

               Cow position:
               chr3:70566074-70565829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               1-250
               

               Cow position:
               chr3:77276740-77276498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-250
               

               Cow position:
               chr3:77496482-77496730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               213, 28
               

               Conread position:
               1-250
               

               Cow position:
               chr3:81371320-81371554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               1-251
               

               Cow position:
               chr3:12797228-12796976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               1-251
               

               Cow position:
               chr3:48852297-48852051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               204, 32
               

               Conread position:
               1-252
               

               Cow position:
               chr3:27289601-27289848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 157
               

               Conread position:
               1-253
               

               Cow position:
               chr3:35919392-35919645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               201, 239
               

               Conread position:
               1-255
               

               Cow position:
               chr3:2035962-2036213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               214, 155
               

               Conread position:
               1-255
               

               Cow position:
               chr3:2674693-2674942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 158
               

               Conread position:
               1-255
               

               Cow position:
               chr3:14453491-14453743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               212, 77
               

               Conread position:
               1-255
               

               Cow position:
               chr3:68342591-68342339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 88
               

               Conread position:
               1-255
               

               Cow position:
               chr3:80071781-80072040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               145, 77
               

               Conread position:
               1-256
               

               Cow position:
               chr3:30179748-30179996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 56
               

               Conread position:
               1-256
               

               Cow position:
               chr3:45523929-45524181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               204, 39
               

               Conread position:
               1-257
               

               Cow position:
               chr3:4332022-4332284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-257
               

               Cow position:
               chr3:15655480-15655231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               205, 48
               

               Conread position:
               1-257
               

               Cow position:
               chr3:22481443-22481188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               1-257
               

               Cow position:
               chr3:59451259-59451505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               165, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr3:2393308-2393046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 166
               

               Conread position:
               1-258
               

               Cow position:
               chr3:2922462-2922720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:3032065-3032322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               135, 32
               

               Conread position:
               1-258
               

               Cow position:
               chr3:3954159-3954413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr3:5064757-5065013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               201, 155
               

               Conread position:
               1-258
               

               Cow position:
               chr3:5101096-5100850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               203, 97
               

               Conread position:
               1-258
               

               Cow position:
               chr3:5950763-5950508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               213, 44
               

               Conread position:
               1-258
               

               Cow position:
               chr3:6265171-6265429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:6689658-6689918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 39
               

               Conread position:
               1-258
               

               Cow position:
               chr3:7280490-7280748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr3:7475756-7475504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               213, 50
               

               Conread position:
               1-258
               

               Cow position:
               chr3:8147998-8147751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               213, 31
               

               Conread position:
               1-258
               

               Cow position:
               chr3:8159619-8159871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr3:8716911-8717169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               170, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr3:10347011-10347272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 166
               

               Conread position:
               1-258
               

               Cow position:
               chr3:11026590-11026838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               214, 137
               

               Conread position:
               1-258
               

               Cow position:
               chr3:11385337-11385595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               213, 235
               

               Conread position:
               1-258
               

               Cow position:
               chr3:11410437-11410181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               213, 23
               

               Conread position:
               1-258
               

               Cow position:
               chr3:12323732-12323991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               152, 67
               

               Conread position:
               1-258
               

               Cow position:
               chr3:13274714-13274456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr3:14552543-14552793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               1-258
               

               Cow position:
               chr3:15052278-15052035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 97
               

               Conread position:
               1-258
               

               Cow position:
               chr3:15081075-15080829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               213, 155
               

               Conread position:
               1-258
               

               Cow position:
               chr3:15387869-15388131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               54, 249
               

               Conread position:
               1-258
               

               Cow position:
               chr3:18393720-18393471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               56, 74
               

               Conread position:
               1-258
               

               Cow position:
               chr3:19708433-19708187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               213, 33
               

               Conread position:
               1-258
               

               Cow position:
               chr3:20129611-20129862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               1-258
               

               Cow position:
               chr3:20796125-20796383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:21100635-21100890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 44
               

               Conread position:
               1-258
               

               Cow position:
               chr3:21341299-21341045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 69
               

               Conread position:
               1-258
               

               Cow position:
               chr3:23286145-23285890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               98, 40
               

               Conread position:
               1-258
               

               Cow position:
               chr3:24442274-24442018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               1-258
               

               Cow position:
               chr3:26219397-26219135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               143, 87
               

               Conread position:
               1-258
               

               Cow position:
               chr3:28635065-28634807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:28675653-28675906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               214, 158
               

               Conread position:
               1-258
               

               Cow position:
               chr3:28908539-28908287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 158
               

               Conread position:
               1-258
               

               Cow position:
               chr3:29807127-29807382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               209, 46
               

               Conread position:
               1-258
               

               Cow position:
               chr3:31047278-31047034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               214, 94
               

               Conread position:
               1-258
               

               Cow position:
               chr3:31056338-31056082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 223
               

               Conread position:
               1-258
               

               Cow position:
               chr3:34026734-34026480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr3:34270598-34270832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:35884289-35884036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               214, 128
               

               Conread position:
               1-258
               

               Cow position:
               chr3:36670758-36670504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               1-258
               

               Cow position:
               chr3:36874229-36873958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 192
               

               Conread position:
               1-258
               

               Cow position:
               chr3:37008925-37008662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               100, 112
               

               Conread position:
               1-258
               

               Cow position:
               chr3:39857807-39858063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               213, 66
               

               Conread position:
               1-258
               

               Cow position:
               chr3:40827518-40827776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               98, 87
               

               Conread position:
               1-258
               

               Cow position:
               chr3:45026114-45025857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               98, 48
               

               Conread position:
               1-258
               

               Cow position:
               chr3:45881573-45881820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               213, 158
               

               Conread position:
               1-258
               

               Cow position:
               chr3:46506604-46506863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               185, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr3:49327610-49327858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               209, 59
               

               Conread position:
               1-258
               

               Cow position:
               chr3:49461273-49461013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:51255438-51255705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 168
               

               Conread position:
               1-258
               

               Cow position:
               chr3:51604943-51604687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               203, 239
               

               Conread position:
               1-258
               

               Cow position:
               chr3:53519611-53519862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               1-258
               

               Cow position:
               chr3:53588728-53588469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               54, 140
               

               Conread position:
               1-258
               

               Cow position:
               chr3:54434637-54434891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               1-258
               

               Cow position:
               chr3:55039758-55039501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               168, 147
               

               Conread position:
               1-258
               

               Cow position:
               chr3:55085526-55085260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               56, 164
               

               Conread position:
               1-258
               

               Cow position:
               chr3:55117305-55117048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               203, 39
               

               Conread position:
               1-258
               

               Cow position:
               chr3:55190083-55189840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               130, 34
               

               Conread position:
               1-258
               

               Cow position:
               chr3:55272376-55272130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               213, 66
               

               Conread position:
               1-258
               

               Cow position:
               chr3:57479665-57479408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               201, 45
               

               Conread position:
               1-258
               

               Cow position:
               chr3:58283346-58283089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr3:59648927-59649172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               214, 40
               

               Conread position:
               1-258
               

               Cow position:
               chr3:59691568-59691814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:59865312-59865569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr3:60092914-60092660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               98, 27
               

               Conread position:
               1-258
               

               Cow position:
               chr3:61191253-61191009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               214, 140
               

               Conread position:
               1-258
               

               Cow position:
               chr3:61361081-61361323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               204, 32
               

               Conread position:
               1-258
               

               Cow position:
               chr3:61678355-61678611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               172, 160
               

               Conread position:
               1-258
               

               Cow position:
               chr3:62826949-62826702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               215, 23
               

               Conread position:
               1-258
               

               Cow position:
               chr3:64716687-64716941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               98, 56
               

               Conread position:
               1-258
               

               Cow position:
               chr3:65989737-65989996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               9, 89
               

               Conread position:
               1-258
               

               Cow position:
               chr3:66610174-66609926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               208, 134
               

               Conread position:
               1-258
               

               Cow position:
               chr3:69751037-69750785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               78, 144
               

               Conread position:
               1-258
               

               Cow position:
               chr3:69849838-69849590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:70450011-70450269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               99, 88
               

               Conread position:
               1-258
               

               Cow position:
               chr3:71497482-71497227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 152
               

               Conread position:
               1-258
               

               Cow position:
               chr3:72169056-72168800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               214, 36
               

               Conread position:
               1-258
               

               Cow position:
               chr3:72776904-72777165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 185
               

               Conread position:
               1-258
               

               Cow position:
               chr3:73211648-73211906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:77271614-77271357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               50, 168
               

               Conread position:
               1-258
               

               Cow position:
               chr3:78110777-78111032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               213, 59
               

               Conread position:
               1-258
               

               Cow position:
               chr3:79220513-79220771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 164
               

               Conread position:
               1-258
               

               Cow position:
               chr3:79902167-79902423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 163
               

               Conread position:
               1-258
               

               Cow position:
               chr3:80053870-80053622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               200, 142
               

               Conread position:
               1-258
               

               Cow position:
               chr3:80082153-80081906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr3:81102164-81102421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-258
               

               Cow position:
               chr3:83816137-83815873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               52, 202
               

               Conread position:
               1-259
               

               Cow position:
               chr3:20137189-20136926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               200, 256
               

               Conread position:
               1-259
               

               Cow position:
               chr3:36174412-36174151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 215
               

               Conread position:
               1-259
               

               Cow position:
               chr3:54782347-54782099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               1-259
               

               Cow position:
               chr3:66846495-66846254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-260
               

               Cow position:
               chr3:1034920-1035179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:5475366-5475626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               201, 252
               

               Conread position:
               1-260
               

               Cow position:
               chr3:13361279-13361538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:14830426-14830172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               187, 135
               

               Conread position:
               1-260
               

               Cow position:
               chr3:14889132-14889391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:15687857-15687602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               1-260
               

               Cow position:
               chr3:16157349-16157604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               150, 33
               

               Conread position:
               1-260
               

               Cow position:
               chr3:16226705-16226958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               201, 68
               

               Conread position:
               1-260
               

               Cow position:
               chr3:17100321-17100072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               201, 33
               

               Conread position:
               1-260
               

               Cow position:
               chr3:18111320-18111061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:18863270-18863529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               210, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:19884286-19884544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               187, 177
               

               Conread position:
               1-260
               

               Cow position:
               chr3:19959427-19959690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 255
               

               Conread position:
               1-260
               

               Cow position:
               chr3:20378891-20378641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               1-260
               

               Cow position:
               chr3:22632602-22632861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:24266030-24266289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:26742041-26741782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:30328837-30328578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               201, 250
               

               Conread position:
               1-260
               

               Cow position:
               chr3:31147306-31147565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:37894656-37894916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 217
               

               Conread position:
               1-260
               

               Cow position:
               chr3:40194703-40194962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:41206739-41206480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:43463626-43463368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 159
               

               Conread position:
               1-260
               

               Cow position:
               chr3:46128306-46128047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:49604615-49604356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:53879433-53879174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               1-260
               

               Cow position:
               chr3:54495727-54495986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               184, 168
               

               Conread position:
               1-260
               

               Cow position:
               chr3:61857160-61857421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 254
               

               Conread position:
               1-260
               

               Cow position:
               chr3:64198145-64198403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               210, 56
               

               Conread position:
               1-260
               

               Cow position:
               chr3:68696144-68695886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               201, 79
               

               Conread position:
               1-260
               

               Cow position:
               chr3:69486369-69486628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:72174183-72173924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:72801688-72801429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:74061300-74061559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-260
               

               Cow position:
               chr3:75265109-75264850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               201, 228
               

               Conread position:
               1-260
               

               Cow position:
               chr3:75771302-75771048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               201, 131
               

               Conread position:
               1-260
               

               Cow position:
               chr3:78472158-78471900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 58
               

               Conread position:
               1-260
               

               Cow position:
               chr3:81471433-81471177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               197, 33
               

               Conread position:
               1-261
               

               Cow position:
               chr3:11567-11827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 251
               

               Conread position:
               1-261
               

               Cow position:
               chr3:19234606-19234866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               1-263
               

               Cow position:
               chr3:4864853-4864587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-263
               

               Cow position:
               chr3:53384619-53384362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               213, 132
               

               Conread position:
               1-264
               

               Cow position:
               chr3:68647824-68648087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               213, 251
               

               Conread position:
               1-265
               

               Cow position:
               chr3:364545-364285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               205, 38
               

               Conread position:
               1-265
               

               Cow position:
               chr3:11333650-11333386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               169, 53
               

               Conread position:
               1-265
               

               Cow position:
               chr3:13291547-13291816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr3:14864704-14864968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               213, 54
               

               Conread position:
               1-265
               

               Cow position:
               chr3:15954413-15954160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               256, 182
               

               Conread position:
               1-265
               

               Cow position:
               chr3:18184732-18185001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               204, 155
               

               Conread position:
               1-265
               

               Cow position:
               chr3:21178424-21178157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-265
               

               Cow position:
               chr3:22919353-22919619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-265
               

               Cow position:
               chr3:23203840-23203575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               201, 89
               

               Conread position:
               1-265
               

               Cow position:
               chr3:23277878-23277616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               1-265
               

               Cow position:
               chr3:24433209-24433475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               1-265
               

               Cow position:
               chr3:24887415-24887686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-265
               

               Cow position:
               chr3:26903781-26904037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               213, 56
               

               Conread position:
               1-265
               

               Cow position:
               chr3:30567947-30568215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-265
               

               Cow position:
               chr3:45312716-45312976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               1-265
               

               Cow position:
               chr3:49416019-49415753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-265
               

               Cow position:
               chr3:53573086-53572827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 153
               

               Conread position:
               1-265
               

               Cow position:
               chr3:55058123-55058388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               1-265
               

               Cow position:
               chr3:62541978-62542239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               187, 157
               

               Conread position:
               1-265
               

               Cow position:
               chr3:66829118-66828850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr3:68042781-68042520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               235, 89
               

               Conread position:
               1-265
               

               Cow position:
               chr3:69945275-69945007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               1-265
               

               Cow position:
               chr3:73762794-73762540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               1-267
               

               Cow position:
               chr3:11640101-11640358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               1-268
               

               Cow position:
               chr3:61467281-61467533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               215, 42
               

               Conread position:
               1-269
               

               Cow position:
               chr3:75710977-75711238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               1-270
               

               Cow position:
               chr3:22490454-22490726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-270
               

               Cow position:
               chr3:45098072-45098345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-272
               

               Cow position:
               chr3:18066798-18067069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 164
               

               Conread position:
               1-272
               

               Cow position:
               chr3:53221692-53221947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               214, 24
               

               Conread position:
               1-272
               

               Cow position:
               chr3:59366214-59366488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               157, 33
               

               Conread position:
               1-272
               

               Cow position:
               chr3:74088497-74088236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               205, 65
               

               Conread position:
               1-272
               

               Cow position:
               chr3:79208327-79208064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               199, 48
               

               Conread position:
               1-273
               

               Cow position:
               chr3:13899789-13899510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               1-273
               

               Cow position:
               chr3:31419360-31419637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               46, 163
               

               Conread position:
               1-274
               

               Cow position:
               chr3:49230679-49230951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               168, 69
               

               Conread position:
               1-275
               

               Cow position:
               chr3:2007938-2008197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-275
               

               Cow position:
               chr3:27544670-27544396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               1-275
               

               Cow position:
               chr3:31298493-31298216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               178, 44
               

               Conread position:
               1-275
               

               Cow position:
               chr3:35852805-35852538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               56, 80
               

               Conread position:
               1-275
               

               Cow position:
               chr3:47284504-47284772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               200, 48
               

               Conread position:
               1-275
               

               Cow position:
               chr3:50768339-50768620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               1-275
               

               Cow position:
               chr3:53593035-53592757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               157, 36
               

               Conread position:
               1-275
               

               Cow position:
               chr3:72018787-72019050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               205, 69
               

               Conread position:
               1-275
               

               Cow position:
               chr3:72390747-72391022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               1-275
               

               Cow position:
               chr3:79292499-79292766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 48
               

               Conread position:
               1-275
               

               Cow position:
               chr3:82359697-82359979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 169
               

               Conread position:
               1-276
               

               Cow position:
               chr3:23169406-23169129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 213
               

               Conread position:
               1-276
               

               Cow position:
               chr3:48269527-48269799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               256, 200
               

               Conread position:
               1-276
               

               Cow position:
               chr3:49218643-49218376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               181, 77
               

               Conread position:
               1-277
               

               Cow position:
               chr3:7959948-7959671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               1-280
               

               Cow position:
               chr3:72675751-72676034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 201
               

               Conread position:
               1-288
               

               Cow position:
               chr3:2903634-2903347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               70, 166
               

               Conread position:
               1-288
               

               Cow position:
               chr3:42976483-42976194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-288
               

               Cow position:
               chr3:57554181-57553901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               1-288
               

               Cow position:
               chr3:79884822-79884532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 77
               

               Conread position:
               1-290
               

               Cow position:
               chr3:209986-210268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 149
               

               Conread position:
               1-290
               

               Cow position:
               chr3:48241285-48241568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               214, 144
               

               Conread position:
               1-290
               

               Cow position:
               chr3:48296375-48296661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               205, 76
               

               Conread position:
               1-291
               

               Cow position:
               chr3:13353024-13353313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               215, 78
               

               Conread position:
               1-291
               

               Cow position:
               chr3:17952320-17952609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 157
               

               Conread position:
               1-291
               

               Cow position:
               chr3:20802964-20802669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               201, 40
               

               Conread position:
               1-291
               

               Cow position:
               chr3:49650045-49650339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 6
               

               Conread position:
               1-291
               

               Cow position:
               chr3:52017424-52017722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               84, 69
               

               Conread position:
               1-291
               

               Cow position:
               chr3:67161600-67161895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               137, 27
               

               Conread position:
               1-293
               

               Cow position:
               chr3:25690457-25690745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               200, 27
               

               Conread position:
               1-293
               

               Cow position:
               chr3:68586705-68586976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               257, 33
               

               Conread position:
               1-299
               

               Cow position:
               chr3:61539461-61539764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 33
               

               Conread position:
               1-309
               

               Cow position:
               chr3:5365349-5365649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               47, 142
               

               Conread position:
               1-309
               

               Cow position:
               chr3:75727925-75727611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               1-310
               

               Cow position:
               chr3:33698389-33698699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 36
               

               Conread position:
               1-310
               

               Cow position:
               chr3:61278577-61278885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               1-310
               

               Cow position:
               chr3:71231070-71231370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               197, 144
               

               Conread position:
               1-312
               

               Cow position:
               chr3:27285893-27286206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               204, 23
               

               Conread position:
               1-314
               

               Cow position:
               chr3:9663523-9663194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               152, 249
               

               Conread position:
               1-326
               

               Cow position:
               chr3:19691662-19691335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 132
               

               Conread position:
               1-333
               

               Cow position:
               chr3:67398166-67397832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-363
               

               Cow position:
               chr3:45293902-45294268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 322
               

               Conread position:
               1-367
               

               Cow position:
               chr3:46856548-46856179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               201, 77
               

               Conread position:
               2-140
               

               Cow position:
               chr3:59596870-59597003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               2-146
               

               Cow position:
               chr3:78559702-78559558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-149
               

               Cow position:
               chr3:597954-598101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 76
               

               Conread position:
               2-149
               

               Cow position:
               chr3:79094401-79094258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-152
               

               Cow position:
               chr3:45700499-45700648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               2-185
               

               Cow position:
               chr3:57464658-57464840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               98, 111
               

               Conread position:
               2-203
               

               Cow position:
               chr3:42277420-42277220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               2-204
               

               Cow position:
               chr3:5394305-5394103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-204
               

               Cow position:
               chr3:65474261-65474463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-214
               

               Cow position:
               chr3:66738438-66738650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               137, 76
               

               Conread position:
               2-218
               

               Cow position:
               chr3:68357707-68357497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               2-220
               

               Cow position:
               chr3:7763332-7763545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               77, 8
               

               Conread position:
               2-221
               

               Cow position:
               chr3:9116575-9116783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               213, 32
               

               Conread position:
               2-226
               

               Cow position:
               chr3:3836770-3836544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               2-226
               

               Cow position:
               chr3:15786228-15786452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               156, 177
               

               Conread position:
               2-226
               

               Cow position:
               chr3:55733608-55733827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               213, 76
               

               Conread position:
               2-229
               

               Cow position:
               chr3:18245751-18245531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               212, 67
               

               Conread position:
               2-232
               

               Cow position:
               chr3:22908166-22907940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               146, 32
               

               Conread position:
               2-234
               

               Cow position:
               chr3:7408148-7408381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               2-235
               

               Cow position:
               chr3:80973018-80973251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 222
               

               Conread position:
               2-236
               

               Cow position:
               chr3:17937186-17936940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               57, 104
               

               Conread position:
               2-247
               

               Cow position:
               chr3:54340751-54340506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               86, 221
               

               Conread position:
               2-249
               

               Cow position:
               chr3:12982054-12981807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               200, 78
               

               Conread position:
               2-249
               

               Cow position:
               chr3:12986520-12986273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               200, 78
               

               Conread position:
               2-249
               

               Cow position:
               chr3:70130155-70129903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 124
               

               Conread position:
               2-255
               

               Cow position:
               chr3:80564626-80564877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               2-258
               

               Cow position:
               chr3:15662033-15661783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               2-258
               

               Cow position:
               chr3:16380912-16380656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               200, 211
               

               Conread position:
               2-258
               

               Cow position:
               chr3:26920560-26920824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               2-258
               

               Cow position:
               chr3:49454897-49455155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 167
               

               Conread position:
               2-258
               

               Cow position:
               chr3:56697604-56697861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 87
               

               Conread position:
               2-258
               

               Cow position:
               chr3:59001080-59000835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               2-258
               

               Cow position:
               chr3:61839956-61840193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               214, 46
               

               Conread position:
               2-258
               

               Cow position:
               chr3:67544209-67543951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               37, 70
               

               Conread position:
               2-258
               

               Cow position:
               chr3:69930005-69929748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               2-259
               

               Cow position:
               chr3:1133427-1133173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               181, 39
               

               Conread position:
               2-259
               

               Cow position:
               chr3:2483121-2483363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 32
               

               Conread position:
               2-273
               

               Cow position:
               chr3:7858017-7858303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               2-273
               

               Cow position:
               chr3:14466039-14465778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               255, 110
               

               Conread position:
               2-275
               

               Cow position:
               chr3:2506814-2506539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               212, 70
               

               Conread position:
               2-275
               

               Cow position:
               chr3:22872387-22872110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 157
               

               Conread position:
               2-276
               

               Cow position:
               chr3:16547341-16547614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 152
               

               Conread position:
               2-276
               

               Cow position:
               chr3:54653326-54653049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               97, 87
               

               Conread position:
               2-276
               

               Cow position:
               chr3:67929601-67929323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 107
               

               Conread position:
               2-282
               

               Cow position:
               chr3:59588184-59588463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               196, 157
               

               Conread position:
               2-291
               

               Cow position:
               chr3:31903443-31903161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               194, 77
               

               Conread position:
               2-292
               

               Cow position:
               chr3:65058367-65058656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               212, 76
               

               Conread position:
               2-304
               

               Cow position:
               chr3:1830900-1830610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 112
               

               Conread position:
               2-322
               

               Cow position:
               chr3:14626485-14626170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               211, 82
               

               Conread position:
               3-175
               

               Cow position:
               chr3:40630087-40629916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               47, 146
               

               Conread position:
               3-176
               

               Cow position:
               chr3:66805436-66805608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               96, 49
               

               Conread position:
               3-200
               

               Cow position:
               chr3:31225116-31225312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               3-204
               

               Cow position:
               chr3:23942744-23942945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-205
               

               Cow position:
               chr3:38252661-38252856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-206
               

               Cow position:
               chr3:10017780-10017983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-212
               

               Cow position:
               chr3:17885351-17885559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               3-216
               

               Cow position:
               chr3:21626433-21626647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               3-219
               

               Cow position:
               chr3:78546433-78546216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 72
               

               Conread position:
               3-234
               

               Cow position:
               chr3:67782959-67782732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               3-249
               

               Cow position:
               chr3:29412500-29412747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               3-249
               

               Cow position:
               chr3:59630834-59630594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               77, 157
               

               Conread position:
               3-250
               

               Cow position:
               chr3:40689288-40689044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               211, 75
               

               Conread position:
               3-250
               

               Cow position:
               chr3:75479683-75479911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               207, 31
               

               Conread position:
               3-258
               

               Cow position:
               chr3:6853837-6853588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 79
               

               Conread position:
               3-258
               

               Cow position:
               chr3:12712257-12712001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               3-258
               

               Cow position:
               chr3:22089616-22089361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               182, 123
               

               Conread position:
               3-258
               

               Cow position:
               chr3:33124426-33124171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               96, 67
               

               Conread position:
               3-258
               

               Cow position:
               chr3:42452176-42452431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 154
               

               Conread position:
               3-258
               

               Cow position:
               chr3:47978369-47978626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               183, 148
               

               Conread position:
               3-258
               

               Cow position:
               chr3:53903855-53904096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               3-258
               

               Cow position:
               chr3:66978509-66978753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               3-259
               

               Cow position:
               chr3:42423665-42423415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               211, 148
               

               Conread position:
               3-260
               

               Cow position:
               chr3:31780944-31781197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               199, 144
               

               Conread position:
               3-265
               

               Cow position:
               chr3:11986997-11987255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               212, 43
               

               Conread position:
               3-272
               

               Cow position:
               chr3:78076858-78077123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               155, 31
               

               Conread position:
               3-275
               

               Cow position:
               chr3:9843244-9843523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               3-275
               

               Cow position:
               chr3:50614311-50614574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               204, 64
               

               Conread position:
               3-289
               

               Cow position:
               chr3:41367317-41367035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 76
               

               Conread position:
               4-145
               

               Cow position:
               chr3:522392-522533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               131, 84
               

               Conread position:
               4-149
               

               Cow position:
               chr3:13480531-13480674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               4-179
               

               Cow position:
               chr3:6384336-6384510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               4-204
               

               Cow position:
               chr3:51362502-51362302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               4-234
               

               Cow position:
               chr3:68650486-68650717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               4-249
               

               Cow position:
               chr3:48370798-48371043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               202, 210
               

               Conread position:
               4-258
               

               Cow position:
               chr3:48252564-48252801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               209, 92
               

               Conread position:
               4-273
               

               Cow position:
               chr3:61171835-61171571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               169, 69
               

               Conread position:
               5-147
               

               Cow position:
               chr3:4120527-4120666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               5-165
               

               Cow position:
               chr3:50099160-50099322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               5-195
               

               Cow position:
               chr3:2334952-2335140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               5-204
               

               Cow position:
               chr3:26218048-26217850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               5-207
               

               Cow position:
               chr3:36672337-36672133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               5-233
               

               Cow position:
               chr3:57457476-57457700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               5-235
               

               Cow position:
               chr3:39066001-39066232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               195, 157
               

               Conread position:
               5-249
               

               Cow position:
               chr3:14724965-14725210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               5-253
               

               Cow position:
               chr3:53935131-53935380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               94, 84
               

               Conread position:
               5-258
               

               Cow position:
               chr3:26973799-26973543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               5-258
               

               Cow position:
               chr3:31206540-31206792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 146
               

               Conread position:
               5-258
               

               Cow position:
               chr3:60597221-60597458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               208, 53
               

               Conread position:
               5-273
               

               Cow position:
               chr3:14263063-14263329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               196, 29
               

               Conread position:
               5-273
               

               Cow position:
               chr3:83474417-83474677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               209, 72
               

               Conread position:
               5-275
               

               Cow position:
               chr3:79592220-79591945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 34
               

               Conread position:
               6-205
               

               Cow position:
               chr3:50329406-50329211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               6-215
               

               Cow position:
               chr3:18724060-18723850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               6-228
               

               Cow position:
               chr3:37280750-37280971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               196, 212
               

               Conread position:
               6-234
               

               Cow position:
               chr3:34571067-34571295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               208, 35
               

               Conread position:
               6-257
               

               Cow position:
               chr3:18459851-18459605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 153
               

               Conread position:
               6-258
               

               Cow position:
               chr3:42177829-42178075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               195, 78
               

               Conread position:
               6-258
               

               Cow position:
               chr3:45214967-45214723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               208, 153
               

               Conread position:
               6-258
               

               Cow position:
               chr3:59271228-59271457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               6-282
               

               Cow position:
               chr3:3164824-3164551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               203, 28
               

               Conread position:
               7-148
               

               Cow position:
               chr3:2630471-2630613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               7-152
               

               Cow position:
               chr3:59101505-59101649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               91, 71
               

               Conread position:
               7-155
               

               Cow position:
               chr3:61323024-61323169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               7-167
               

               Cow position:
               chr3:57022248-57022404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               7-204
               

               Cow position:
               chr3:35029429-35029232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               80, 114
               

               Conread position:
               7-204
               

               Cow position:
               chr3:62304899-62305094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               7-206
               

               Cow position:
               chr3:56582516-56582708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               7-258
               

               Cow position:
               chr3:53538187-53538438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               7-258
               

               Cow position:
               chr3:54903244-54903492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               198, 5
               

               Conread position:
               7-273
               

               Cow position:
               chr3:4457406-4457138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               172, 178
               

               Conread position:
               7-275
               

               Cow position:
               chr3:58969223-58968963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               7-275
               

               Cow position:
               chr3:80581345-80581601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               207, 26
               

               Conread position:
               8-219
               

               Cow position:
               chr3:8753135-8753347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               119, 70
               

               Conread position:
               8-258
               

               Cow position:
               chr3:31309691-31309437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 158
               

               Conread position:
               8-258
               

               Cow position:
               chr3:55970178-55970423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               206, 67
               

               Conread position:
               8-272
               

               Cow position:
               chr3:82657414-82657151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               207, 151
               

               Conread position:
               8-291
               

               Cow position:
               chr3:67704207-67704497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               9-176
               

               Cow position:
               chr3:78088775-78088608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-206
               

               Cow position:
               chr3:62321463-62321269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               9-215
               

               Cow position:
               chr3:12932836-12933043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               9-226
               

               Cow position:
               chr3:28472199-28472417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               9-250
               

               Cow position:
               chr3:70895718-70895959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 205
               

               Conread position:
               9-250
               

               Cow position:
               chr3:81939926-81940165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               205, 37
               

               Conread position:
               9-310
               

               Cow position:
               chr3:2397111-2396805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               201, 205
               

               Conread position:
               10-194
               

               Cow position:
               chr3:31812424-31812613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 92
               

               Conread position:
               10-205
               

               Cow position:
               chr3:22021300-22021107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               10-205
               

               Cow position:
               chr3:58206778-58206584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               10-214
               

               Cow position:
               chr3:68291239-68291443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               196, 123
               

               Conread position:
               10-235
               

               Cow position:
               chr3:49678795-49679020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               184, 144
               

               Conread position:
               10-235
               

               Cow position:
               chr3:62611587-62611799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               90, 47
               

               Conread position:
               10-258
               

               Cow position:
               chr3:7678349-7678585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               197, 31
               

               Conread position:
               10-258
               

               Cow position:
               chr3:50922239-50922487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               204, 168
               

               Conread position:
               10-273
               

               Cow position:
               chr3:73776946-73777219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 102
               

               Conread position:
               10-275
               

               Cow position:
               chr3:83490749-83491023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               10-277
               

               Cow position:
               chr3:83920874-83921136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               204, 24
               

               Conread position:
               10-282
               

               Cow position:
               chr3:5420193-5419919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               11-196
               

               Cow position:
               chr3:13350591-13350771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               11-214
               

               Cow position:
               chr3:39554641-39554448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               12-249
               

               Cow position:
               chr3:18874842-18874604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               12-275
               

               Cow position:
               chr3:46900869-46901134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               13, 67
               

               Conread position:
               13-204
               

               Cow position:
               chr3:40100996-40100808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               13-235
               

               Cow position:
               chr3:70675897-70676118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               13-259
               

               Cow position:
               chr3:59514790-59515021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               13-282
               

               Cow position:
               chr3:77226998-77227266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               194, 14
               

               Conread position:
               14-234
               

               Cow position:
               chr3:59267763-59267983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               168, 14
               

               Conread position:
               14-259
               

               Cow position:
               chr3:2024861-2025104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               185, 145
               

               Conread position:
               14-260
               

               Cow position:
               chr3:81034100-81033853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               15-204
               

               Cow position:
               chr3:77696658-77696468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               15-217
               

               Cow position:
               chr3:42358992-42359191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 74
               

               Conread position:
               15-274
               

               Cow position:
               chr3:28898550-28898286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               34, 70
               

               Conread position:
               15-276
               

               Cow position:
               chr3:77224792-77225053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               32, 85
               

               Conread position:
               16-229
               

               Cow position:
               chr3:40211310-40211524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               16-249
               

               Cow position:
               chr3:14028116-14027882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               17-258
               

               Cow position:
               chr3:57754800-57754560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               188, 53
               

               Conread position:
               18-249
               

               Cow position:
               chr3:8348378-8348146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               18-265
               

               Cow position:
               chr3:78200948-78201196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 183
               

               Conread position:
               19-250
               

               Cow position:
               chr3:51012851-51012623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               195, 145
               

               Conread position:
               19-265
               

               Cow position:
               chr3:30531636-30531886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               80, 70
               

               Conread position:
               20-156
               

               Cow position:
               chr3:24549149-24549013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-231
               

               Cow position:
               chr3:70871205-70871415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               182, 198
               

               Conread position:
               20-258
               

               Cow position:
               chr3:53112851-53113090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 195
               

               Conread position:
               21-206
               

               Cow position:
               chr3:2628002-2628183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               21-234
               

               Cow position:
               chr3:4327963-4328179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               21-234
               

               Cow position:
               chr3:5495813-5495602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               22-156
               

               Cow position:
               chr3:83728185-83728056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               25-204
               

               Cow position:
               chr3:54296756-54296577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-206
               

               Cow position:
               chr3:6024685-6024866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-215
               

               Cow position:
               chr3:32307017-32307208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               25-258
               

               Cow position:
               chr3:53790856-53790620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 54
               

               Conread position:
               25-275
               

               Cow position:
               chr3:46161157-46160908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               195, 139
               

               Conread position:
               27-258
               

               Cow position:
               chr3:65800285-65800508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               78, 48
               

               Conread position:
               28-157
               

               Cow position:
               chr3:18700507-18700378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-219
               

               Cow position:
               chr3:27242828-27242640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               186, 65
               

               Conread position:
               28-258
               

               Cow position:
               chr3:46350343-46350587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               28-275
               

               Cow position:
               chr3:65968846-65969098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               173, 51
               

               Conread position:
               29-220
               

               Cow position:
               chr3:64877372-64877564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               29-258
               

               Cow position:
               chr3:53270517-53270746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               8, 138
               

               Conread position:
               29-258
               

               Cow position:
               chr3:59611024-59610804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               137, 61
               

               Conread position:
               29-260
               

               Cow position:
               chr3:35975413-35975189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               180, 129
               

               Conread position:
               30-215
               

               Cow position:
               chr3:51060246-51060060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               30-276
               

               Cow position:
               chr3:82460876-82461116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 102
               

               Conread position:
               31-205
               

               Cow position:
               chr3:12286930-12287099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               31-258
               

               Cow position:
               chr3:66292480-66292260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               135, 18
               

               Conread position:
               33-259
               

               Cow position:
               chr3:13330077-13329861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               33-275
               

               Cow position:
               chr3:53909810-53910047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               73, 36
               

               Conread position:
               34-160
               

               Cow position:
               chr3:37041126-37041250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               34-246
               

               Cow position:
               chr3:18763591-18763803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               167, 113
               

               Conread position:
               34-260
               

               Cow position:
               chr3:21022380-21022606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               168, 218
               

               Conread position:
               34-260
               

               Cow position:
               chr3:83934211-83934428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 64
               

               Conread position:
               34-265
               

               Cow position:
               chr3:19198378-19198597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               34-272
               

               Cow position:
               chr3:70401600-70401835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               225, 45
               

               Conread position:
               34-313
               

               Cow position:
               chr3:2518840-2518562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               181, 227
               

               Conread position:
               35-235
               

               Cow position:
               chr3:58158766-58158569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               175, 37
               

               Conread position:
               35-273
               

               Cow position:
               chr3:2216058-2216300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               165, 44
               

               Conread position:
               36-258
               

               Cow position:
               chr3:72473606-72473829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               37-214
               

               Cow position:
               chr3:41947421-41947245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               37-234
               

               Cow position:
               chr3:34949696-34949894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               37-249
               

               Cow position:
               chr3:66975549-66975336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               37-276
               

               Cow position:
               chr3:30463466-30463233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               222, 122
               

               Conread position:
               37-291
               

               Cow position:
               chr3:54959891-54960141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               165, 41
               

               Conread position:
               39-248
               

               Cow position:
               chr3:11019820-11020028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               176, 90
               

               Conread position:
               40-275
               

               Cow position:
               chr3:8393049-8393286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               118, 123
               

               Conread position:
               41-211
               

               Cow position:
               chr3:17284541-17284711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               41-214
               

               Cow position:
               chr3:74533051-74533224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               5, 161
               

               Conread position:
               41-218
               

               Cow position:
               chr3:27532959-27532781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               5, 174
               

               Conread position:
               41-228
               

               Cow position:
               chr3:60574762-60574948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               170, 177
               

               Conread position:
               41-258
               

               Cow position:
               chr3:52863477-52863267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               173, 12
               

               Conread position:
               41-258
               

               Cow position:
               chr3:70333769-70333559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               160, 38
               

               Conread position:
               41-275
               

               Cow position:
               chr3:25691452-25691691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               5, 139
               

               Conread position:
               43-258
               

               Cow position:
               chr3:79148570-79148352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               43-259
               

               Cow position:
               chr3:72121-72331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               164, 100
               

               Conread position:
               43-259
               

               Cow position:
               chr3:53739487-53739268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               44-250
               

               Cow position:
               chr3:27274247-27274438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               170, 51
               

               Conread position:
               45-206
               

               Cow position:
               chr3:70468095-70467943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               45-224
               

               Cow position:
               chr3:59392399-59392220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               160, 41
               

               Conread position:
               46-160
               

               Cow position:
               chr3:15057889-15057775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               46-205
               

               Cow position:
               chr3:202725-202567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               46-218
               

               Cow position:
               chr3:66885329-66885157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               117, 102
               

               Conread position:
               46-219
               

               Cow position:
               chr3:42594947-42594776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               46-224
               

               Cow position:
               chr3:15549201-15549377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               46-249
               

               Cow position:
               chr3:45534590-45534389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               168, 39
               

               Conread position:
               46-257
               

               Cow position:
               chr3:14602004-14601796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               170, 33
               

               Conread position:
               46-257
               

               Cow position:
               chr3:65413566-65413364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               161, 33
               

               Conread position:
               46-258
               

               Cow position:
               chr3:3985039-3985244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               168, 113
               

               Conread position:
               46-258
               

               Cow position:
               chr3:18854802-18855012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               159, 97
               

               Conread position:
               46-258
               

               Cow position:
               chr3:33253169-33252960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               46-258
               

               Cow position:
               chr3:51609525-51609737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               168, 206
               

               Conread position:
               46-258
               

               Cow position:
               chr3:56059516-56059724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               187, 97
               

               Conread position:
               46-260
               

               Cow position:
               chr3:27546124-27545925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               46-273
               

               Cow position:
               chr3:64172154-64172376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               220, 80
               

               Conread position:
               46-275
               

               Cow position:
               chr3:19006376-19006596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               164, 110
               

               Conread position:
               46-275
               

               Cow position:
               chr3:71430502-71430270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               153, 13
               

               Conread position:
               47-197
               

               Cow position:
               chr3:54740161-54740015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               47-211
               

               Cow position:
               chr3:23944807-23944969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               47-233
               

               Cow position:
               chr3:45647387-45647572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               47-239
               

               Cow position:
               chr3:23471758-23471565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               47-247
               

               Cow position:
               chr3:17895564-17895752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               162, 86
               

               Conread position:
               47-248
               

               Cow position:
               chr3:44861598-44861396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               47-249
               

               Cow position:
               chr3:16483976-16484179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               47-249
               

               Cow position:
               chr3:68708291-68708096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               158, 39
               

               Conread position:
               47-250
               

               Cow position:
               chr3:15158751-15158951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               167, 112
               

               Conread position:
               47-256
               

               Cow position:
               chr3:54050309-54050105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               158, 89
               

               Conread position:
               47-258
               

               Cow position:
               chr3:56659-56460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               47-258
               

               Cow position:
               chr3:29812954-29813161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               162, 32
               

               Conread position:
               47-258
               

               Cow position:
               chr3:78946129-78945918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               47-260
               

               Cow position:
               chr3:48275537-48275751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               126, 37
               

               Conread position:
               47-273
               

               Cow position:
               chr3:74699685-74699460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               178, 67
               

               Conread position:
               47-275
               

               Cow position:
               chr3:5096913-5097143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               47-275
               

               Cow position:
               chr3:20437937-20437715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               47-275
               

               Cow position:
               chr3:58540820-58540590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               167, 32
               

               Conread position:
               47-291
               

               Cow position:
               chr3:17957177-17957416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               158, 48
               

               Conread position:
               48-276
               

               Cow position:
               chr3:29596106-29596324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               49-214
               

               Cow position:
               chr3:42914165-42914329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               49-226
               

               Cow position:
               chr3:80202319-80202494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               166, 107
               

               Conread position:
               49-249
               

               Cow position:
               chr3:39970160-39969960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               167, 160
               

               Conread position:
               49-250
               

               Cow position:
               chr3:34316252-34316049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               49-257
               

               Cow position:
               chr3:23876710-23876911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               158, 102
               

               Conread position:
               49-258
               

               Cow position:
               chr3:56704825-56704627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               160, 87
               

               Conread position:
               49-275
               

               Cow position:
               chr3:38691692-38691470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               137, 8
               

               Conread position:
               49-275
               

               Cow position:
               chr3:64281224-64280995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               49-276
               

               Cow position:
               chr3:60933126-60933353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               50-249
               

               Cow position:
               chr3:73443374-73443179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               164, 106
               

               Conread position:
               50-258
               

               Cow position:
               chr3:30417842-30418046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               124, 133
               

               Conread position:
               50-258
               

               Cow position:
               chr3:73467332-73467540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               153, 74
               

               Conread position:
               51-251
               

               Cow position:
               chr3:83369036-83369227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               164, 99
               

               Conread position:
               51-258
               

               Cow position:
               chr3:35074399-35074600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               158, 34
               

               Conread position:
               51-258
               

               Cow position:
               chr3:71161508-71161712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               151, 105
               

               Conread position:
               51-275
               

               Cow position:
               chr3:4031682-4031907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               158, 107
               

               Conread position:
               52-258
               

               Cow position:
               chr3:19789404-19789198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               117, 104
               

               Conread position:
               53-258
               

               Cow position:
               chr3:67744912-67744710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               67, 162
               

               Conread position:
               54-160
               

               Cow position:
               chr3:30701039-30701147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               54-293
               

               Cow position:
               chr3:20675162-20674917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               107, 60
               

               Conread position:
               55-188
               

               Cow position:
               chr3:59040161-59040293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               55-205
               

               Cow position:
               chr3:60892351-60892496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               55-214
               

               Cow position:
               chr3:1498588-1498747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               55-250
               

               Cow position:
               chr3:59208532-59208723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               160, 97
               

               Conread position:
               55-258
               

               Cow position:
               chr3:8457375-8457571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               55-258
               

               Cow position:
               chr3:39171766-39171566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               159, 118
               

               Conread position:
               55-273
               

               Cow position:
               chr3:66901024-66900802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               150, 104
               

               Conread position:
               56-218
               

               Cow position:
               chr3:55460782-55460619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 159
               

               Conread position:
               56-258
               

               Cow position:
               chr3:68583283-68583085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               158, 23
               

               Conread position:
               56-258
               

               Cow position:
               chr3:77365575-77365381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               56-258
               

               Cow position:
               chr3:81277985-81277782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 146
               

               Conread position:
               56-273
               

               Cow position:
               chr3:17456550-17456332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               159, 188
               

               Conread position:
               57-245
               

               Cow position:
               chr3:53046937-53046753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               141, 94
               

               Conread position:
               57-249
               

               Cow position:
               chr3:5416511-5416311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               57-250
               

               Cow position:
               chr3:38863833-38864024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               57-253
               

               Cow position:
               chr3:18607088-18607285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               28, 165
               

               Conread position:
               57-257
               

               Cow position:
               chr3:34392376-34392181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               57-258
               

               Cow position:
               chr3:57763943-57764144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               152, 157
               

               Conread position:
               57-266
               

               Cow position:
               chr3:26065721-26065927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               157, 99
               

               Conread position:
               57-275
               

               Cow position:
               chr3:55124558-55124347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               57-275
               

               Cow position:
               chr3:75158085-75158296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               152, 94
               

               Conread position:
               57-288
               

               Cow position:
               chr3:63861181-63860939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               143, 163
               

               Conread position:
               58-245
               

               Cow position:
               chr3:61262524-61262707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               151, 90
               

               Conread position:
               58-258
               

               Cow position:
               chr3:42483621-42483818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               149, 101
               

               Conread position:
               58-258
               

               Cow position:
               chr3:42588070-42588274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               143, 108
               

               Conread position:
               58-275
               

               Cow position:
               chr3:49731916-49731704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               151, 21
               

               Conread position:
               59-257
               

               Cow position:
               chr3:5374057-5374248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               150, 20
               

               Conread position:
               61-258
               

               Cow position:
               chr3:6873521-6873327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               61-258
               

               Cow position:
               chr3:74499948-74500155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               61-260
               

               Cow position:
               chr3:73764469-73764277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               153, 37
               

               Conread position:
               63-236
               

               Cow position:
               chr3:75164184-75164015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               161, 70
               

               Conread position:
               63-250
               

               Cow position:
               chr3:54945851-54946037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               151, 29
               

               Conread position:
               64-249
               

               Cow position:
               chr3:525081-525258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               152, 87
               

               Conread position:
               66-276
               

               Cow position:
               chr3:84000341-84000551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               148, 92
               

               Conread position:
               67-258
               

               Cow position:
               chr3:44932246-44932429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 23
               

               Conread position:
               67-292
               

               Cow position:
               chr3:51578591-51578367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               191, 91
               

               Conread position:
               67-316
               

               Cow position:
               chr3:13302126-13301870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               60, 103
               

               Conread position:
               68-235
               

               Cow position:
               chr3:17451203-17451038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               72-258
               

               Cow position:
               chr3:55970960-55971143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               137, 94
               

               Conread position:
               73-275
               

               Cow position:
               chr3:73590262-73590062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               136, 33
               

               Conread position:
               75-258
               

               Cow position:
               chr3:74621259-74621074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               130, 118
               

               Conread position:
               75-312
               

               Cow position:
               chr3:75080504-75080740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               139, 126
               

               Conread position:
               76-274
               

               Cow position:
               chr3:51234357-51234160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               138, 82
               

               Conread position:
               78-289
               

               Cow position:
               chr3:28692689-28692480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               126, 69
               

               Conread position:
               79-235
               

               Cow position:
               chr3:52607925-52608081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               135, 122
               

               Conread position:
               79-290
               

               Cow position:
               chr3:4087424-4087211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               122, 80
               

               Conread position:
               79-292
               

               Cow position:
               chr3:71237899-71238110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               84-259
               

               Cow position:
               chr3:5045063-5044885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               89-316
               

               Cow position:
               chr3:43233255-43233486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               91-265
               

               Cow position:
               chr3:83201774-83201599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 118
               

               Conread position:
               99-265
               

               Cow position:
               chr3:4861451-4861610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               115, 60
               

               Conread position:
               120-277
               

               Cow position:
               chr3:25944860-25945022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 155
               
Show alignments to all cow chromosomes.
Conread position:	1-83
Cow position:	chr3:34973358-34973276 (view UCSC Genome Browser custom track)
Alignm length:	83
Alignm identity:	74
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-86
Cow position:	chr3:10244981-10245066 (view UCSC Genome Browser custom track)
Alignm length:	86
Alignm identity:	77
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	1-87
Cow position:	chr3:6068438-6068524 (view UCSC Genome Browser custom track)
Alignm length:	87
Alignm identity:	77
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-90
Cow position:	chr3:65079257-65079168 (view UCSC Genome Browser custom track)
Alignm length:	90
Alignm identity:	78
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-93
Cow position:	chr3:35074018-35074110 (view UCSC Genome Browser custom track)
Alignm length:	94
Alignm identity:	82
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	57, 78
Conread position:	1-103
Cow position:	chr3:11123109-11123211 (view UCSC Genome Browser custom track)
Alignm length:	103
Alignm identity:	86
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	1-112
Cow position:	chr3:8591676-8591570 (view UCSC Genome Browser custom track)
Alignm length:	112
Alignm identity:	93
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	33, 0
Conread position:	1-116
Cow position:	chr3:24935019-24935131 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	98
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	36, 78
Conread position:	1-120
Cow position:	chr3:15377760-15377641 (view UCSC Genome Browser custom track)
Alignm length:	120
Alignm identity:	100
Alignm E-value:	8e-29
Alignm gaps (pig, cow):	0, 0
Conread position:	1-122
Cow position:	chr3:30355889-30356009 (view UCSC Genome Browser custom track)
Alignm length:	122
Alignm identity:	100
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	77, 0
Conread position:	1-123
Cow position:	chr3:34819556-34819434 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	95
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-125
Cow position:	chr3:12932599-12932723 (view UCSC Genome Browser custom track)
Alignm length:	125
Alignm identity:	97
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	1-127
Cow position:	chr3:22196620-22196494 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	98
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	1-130
Cow position:	chr3:4319333-4319205 (view UCSC Genome Browser custom track)
Alignm length:	130
Alignm identity:	103
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	77, 0
Conread position:	1-134
Cow position:	chr3:26931225-26931092 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	109
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	0, 0
Conread position:	1-141
Cow position:	chr3:53429224-53429086 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	113
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	80, 33
Conread position:	1-142
Cow position:	chr3:50069443-50069584 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	109
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	46, 62
Conread position:	1-143
Cow position:	chr3:26981020-26981157 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	115
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	27, 0
Conread position:	1-144
Cow position:	chr3:76188358-76188501 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	109
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	78, 62
Conread position:	1-146
Cow position:	chr3:13513070-13512928 (view UCSC Genome Browser custom track)
Alignm length:	146
Alignm identity:	115
Alignm E-value:	8e-29
Alignm gaps (pig, cow):	44, 0