Cow genome map

Conread name: Ss1.1-Pig4-TMW8016F16.3

Conread position: 1-85
Cow position: chrX:2715336-2715420 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-86
Cow position: chrX:10348120-10348035 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 78
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-86
Cow position: chrX:14008939-14008854 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-86
Cow position: chrX:16222339-16222424 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-86
Cow position: chrX:19399492-19399577 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-86
Cow position: chrX:24975651-24975736 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-86
Cow position: chrX:28314139-28314224 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-87
Cow position: chrX:43730478-43730392 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 75
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-89
Cow position: chrX:17892257-17892345 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 81
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position: chrX:11614435-11614554 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position: chrX:47965271-47965152 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chrX:525390-525514 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chrX:24788002-24787883 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 1-125
Cow position: chrX:27019917-27020040 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 1-125
Cow position: chrX:36311313-36311433 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 1-125
Cow position: chrX:45945347-45945468 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 1-125
Cow position: chrX:48423649-48423773 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-126
Cow position: chrX:36794708-36794833 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 88

Conread position: 1-128
Cow position: chrX:42221854-42221732 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 1-138
Cow position: chrX:17888072-17888209 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position: chrX:20976345-20976211 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 40

Conread position: 1-143
Cow position: chrX:40648380-40648519 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 98, 33

Conread position: 1-144
Cow position: chrX:8103379-8103236 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-144
Cow position: chrX:32214757-32214614 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-144
Cow position: chrX:43114887-43115027 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-146
Cow position: chrX:616689-616547 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 1-146
Cow position: chrX:2485917-2485772 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 98, 88

Conread position: 1-146
Cow position: chrX:24291968-24291823 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 88

Conread position: 1-146
Cow position: chrX:27997364-27997505 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-146
Cow position: chrX:40602678-40602821 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-149
Cow position: chrX:23135289-23135434 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-149
Cow position: chrX:24467411-24467263 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-149
Cow position: chrX:27240450-27240600 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-149
Cow position: chrX:36514167-36514314 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 77

Conread position: 1-149
Cow position: chrX:39699040-39699189 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 1-149
Cow position: chrX:42733579-42733727 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 88

Conread position: 1-152
Cow position: chrX:3570165-3570316 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 98, 88

Conread position: 1-152
Cow position: chrX:3808120-3808273 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 95

Conread position: 1-152
Cow position: chrX:6558564-6558718 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 1-152
Cow position: chrX:16853675-16853524 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 88

Conread position: 1-152
Cow position: chrX:18451365-18451214 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chrX:21844348-21844502 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 67, 78

Conread position: 1-152
Cow position: chrX:26617207-26617056 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chrX:26754915-26754767 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 48

Conread position: 1-152
Cow position: chrX:30052755-30052604 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chrX:37079825-37079674 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chrX:39954824-39954673 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chrX:47379753-47379603 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 142, 0

Conread position: 1-154
Cow position: chrX:2351776-2351929 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-154
Cow position: chrX:22325789-22325943 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 112

Conread position: 1-156
Cow position: chrX:15304611-15304456 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position: chrX:29723165-29723317 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 1-157
Cow position: chrX:4483858-4484019 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 1-157
Cow position: chrX:5640905-5640763 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-157
Cow position: chrX:28588684-28588840 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-157
Cow position: chrX:38577247-38577402 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 0

Conread position: 1-160
Cow position: chrX:33205278-33205119 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 134
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-162
Cow position: chrX:5919184-5919345 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 68

Conread position: 1-162
Cow position: chrX:21861961-21861795 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 148

Conread position: 1-164
Cow position: chrX:48135166-48135007 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-165
Cow position: chrX:9898628-9898463 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 78

Conread position: 1-165
Cow position: chrX:48456631-48456467 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-167
Cow position: chrX:5408769-5408935 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chrX:7097172-7097338 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-168
Cow position: chrX:10718224-10718390 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 98, 77

Conread position: 1-168
Cow position: chrX:10915752-10915919 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chrX:10992332-10992499 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chrX:14134895-14135062 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 33

Conread position: 1-168
Cow position: chrX:15620818-15620650 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 157, 0

Conread position: 1-168
Cow position: chrX:20032117-20031950 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chrX:21344108-21344275 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chrX:22568305-22568138 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chrX:28559121-28558956 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 1-168
Cow position: chrX:30531318-30531147 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 1-168
Cow position: chrX:30940895-30941062 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chrX:40591400-40591567 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-169
Cow position: chrX:30060817-30060649 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chrX:24102693-24102863 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chrX:26754071-26753901 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chrX:27982431-27982262 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 1-171
Cow position: chrX:28646271-28646104 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-171
Cow position: chrX:32747372-32747544 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 1-171
Cow position: chrX:39386551-39386382 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 45

Conread position: 1-172
Cow position: chrX:7677682-7677854 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-172
Cow position: chrX:41846820-41846649 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-177
Cow position: chrX:9651331-9651156 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 1-177
Cow position: chrX:22115568-22115392 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 73

Conread position: 1-179
Cow position: chrX:2151218-2151041 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 150, 0

Conread position: 1-179
Cow position: chrX:5406772-5406947 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 1-179
Cow position: chrX:6828849-6829028 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 1-179
Cow position: chrX:9593421-9593243 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-179
Cow position: chrX:14458453-14458277 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 1-179
Cow position: chrX:15114385-15114563 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-179
Cow position: chrX:30837087-30837265 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-179
Cow position: chrX:41886081-41885903 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-180
Cow position: chrX:10415812-10415632 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 99, 93

Conread position: 1-183
Cow position: chrX:6454409-6454591 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-183
Cow position: chrX:16722088-16721906 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 168, 173

Conread position: 1-195
Cow position: chrX:39187653-39187458 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 1-200
Cow position: chrX:5507390-5507587 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 1-200
Cow position: chrX:30199278-30199079 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-202
Cow position: chrX:9252460-9252264 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 1-203
Cow position: chrX:4325783-4325577 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 107, 96

Conread position: 1-203
Cow position: chrX:9227270-9227066 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 82

Conread position: 1-203
Cow position: chrX:12852795-12852594 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 1-203
Cow position: chrX:22811600-22811801 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 1-203
Cow position: chrX:29049689-29049876 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 1-203
Cow position: chrX:33803302-33803097 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 1-203
Cow position: chrX:41192404-41192598 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 138, 67

Conread position: 1-204
Cow position: chrX:3361533-3361735 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 187, 84

Conread position: 1-204
Cow position: chrX:3464362-3464161 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 1-204
Cow position: chrX:3658340-3658137 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:5112842-5112639 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:5334105-5333904 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1-204
Cow position: chrX:5646390-5646187 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:6607123-6607336 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 48, 94

Conread position: 1-204
Cow position: chrX:7742743-7742540 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:10444701-10444497 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 1-204
Cow position: chrX:11566628-11566831 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:11715748-11715545 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:12360603-12360806 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:13070888-13070685 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:13091448-13091245 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:13196257-13196054 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:16074290-16074493 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:16279363-16279566 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:16808042-16807838 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 1-204
Cow position: chrX:17980309-17980512 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:18223127-18223329 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 33

Conread position: 1-204
Cow position: chrX:19109327-19109124 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:19495246-19495043 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:20376684-20376878 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 1-204
Cow position: chrX:20653107-20653312 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 174

Conread position: 1-204
Cow position: chrX:21255751-21255953 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 87

Conread position: 1-204
Cow position: chrX:22608878-22608675 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:22888372-22888576 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 1-204
Cow position: chrX:23235544-23235747 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:23452884-23452681 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:23986959-23987161 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 98, 14

Conread position: 1-204
Cow position: chrX:24447515-24447718 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:24735652-24735855 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 87

Conread position: 1-204
Cow position: chrX:27627069-27627272 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:28555721-28555518 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:29226190-29226393 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:29508497-29508694 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-204
Cow position: chrX:29841455-29841252 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 88

Conread position: 1-204
Cow position: chrX:30021384-30021181 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:30538438-30538235 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:30752488-30752691 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:30863485-30863282 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:31814175-31813972 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:32331345-32331544 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 1-204
Cow position: chrX:34009464-34009663 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 94

Conread position: 1-204
Cow position: chrX:36692949-36693148 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 92

Conread position: 1-204
Cow position: chrX:36820518-36820315 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:37061077-37060874 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:37764483-37764280 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:38051718-38051517 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 135, 0

Conread position: 1-204
Cow position: chrX:42165789-42165992 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:42779412-42779209 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:43511134-43511336 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-204
Cow position: chrX:43767823-43767620 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:44168595-44168392 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position: chrX:44851804-44852011 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 1-204
Cow position: chrX:44980323-44980121 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 153, 0

Conread position: 1-204
Cow position: chrX:45263354-45263152 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 132, 0

Conread position: 1-204
Cow position: chrX:47362172-47361969 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 88

Conread position: 1-204
Cow position: chrX:48248537-48248738 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 75, 160

Conread position: 1-205
Cow position: chrX:160318-160119 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 1-205
Cow position: chrX:5127635-5127831 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 1-205
Cow position: chrX:17271575-17271371 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-205
Cow position: chrX:25205424-25205636 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-205
Cow position: chrX:25419446-25419244 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 1-205
Cow position: chrX:25924823-25924619 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 157, 162

Conread position: 1-205
Cow position: chrX:37377553-37377348 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 160, 17

Conread position: 1-205
Cow position: chrX:43648030-43647829 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 127

Conread position: 1-205
Cow position: chrX:44930348-44930553 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-206
Cow position: chrX:3161302-3161099 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 78, 160

Conread position: 1-206
Cow position: chrX:4629977-4629770 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 1-206
Cow position: chrX:5047183-5046989 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 128, 93

Conread position: 1-206
Cow position: chrX:5376083-5376288 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 88

Conread position: 1-206
Cow position: chrX:5856798-5856600 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 1-206
Cow position: chrX:14908730-14908933 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 1-206
Cow position: chrX:23280720-23280922 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 153, 0

Conread position: 1-206
Cow position: chrX:26492716-26492921 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-206
Cow position: chrX:27318929-27319135 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 42, 89

Conread position: 1-206
Cow position: chrX:30180212-30180009 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 165, 0

Conread position: 1-206
Cow position: chrX:37299310-37299515 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 78

Conread position: 1-206
Cow position: chrX:46771258-46771053 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 80, 152

Conread position: 1-208
Cow position: chrX:3372143-3371937 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 1-208
Cow position: chrX:31839223-31839429 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 95, 107

Conread position: 1-209
Cow position: chrX:4404249-4404457 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-209
Cow position: chrX:9168900-9168692 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-209
Cow position: chrX:14152501-14152295 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 184, 0

Conread position: 1-209
Cow position: chrX:32144449-32144247 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 155, 0

Conread position: 1-209
Cow position: chrX:38014808-38015016 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-209
Cow position: chrX:48205199-48204990 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 88

Conread position: 1-211
Cow position: chrX:2104119-2104325 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 150, 0

Conread position: 1-211
Cow position: chrX:6038208-6037998 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 88

Conread position: 1-211
Cow position: chrX:11725553-11725339 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 92

Conread position: 1-211
Cow position: chrX:29083839-29084044 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 1-211
Cow position: chrX:40581706-40581911 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 14, 24

Conread position: 1-212
Cow position: chrX:24280649-24280866 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 163, 0

Conread position: 1-212
Cow position: chrX:27761054-27761267 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 185, 0

Conread position: 1-213
Cow position: chrX:5892942-5893154 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-213
Cow position: chrX:29877467-29877255 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-214
Cow position: chrX:10916468-10916671 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 0

Conread position: 1-214
Cow position: chrX:32309815-32310031 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 82

Conread position: 1-214
Cow position: chrX:48675790-48675999 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 159

Conread position: 1-215
Cow position: chrX:126505-126715 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 158

Conread position: 1-215
Cow position: chrX:1975883-1975668 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:2417770-2417555 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:2524016-2523802 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 184, 200

Conread position: 1-215
Cow position: chrX:2664723-2664938 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:7311707-7311922 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:10922857-10922642 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:13396538-13396323 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:15008718-15008503 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:15091053-15090838 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:15781295-15781510 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:20099036-20099251 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:24509581-24509796 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:24966983-24967198 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:28058081-28057866 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:30197011-30197226 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:30965815-30966030 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:34095275-34095490 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:35497800-35498015 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:36479646-36479861 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:36730098-36730315 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 180, 0

Conread position: 1-215
Cow position: chrX:37497733-37497518 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 0

Conread position: 1-215
Cow position: chrX:37772720-37772504 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 1-215
Cow position: chrX:48328673-48328458 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 0

Conread position: 1-216
Cow position: chrX:39549044-39549260 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 201, 0

Conread position: 1-216
Cow position: chrX:45467506-45467290 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 1-217
Cow position: chrX:20321053-20320837 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 33

Conread position: 1-217
Cow position: chrX:21011608-21011390 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 33

Conread position: 1-217
Cow position: chrX:25283426-25283224 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 1-217
Cow position: chrX:42507930-42507720 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 97, 33

Conread position: 1-217
Cow position: chrX:47608128-47608345 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-218
Cow position: chrX:12826461-12826678 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 206, 213

Conread position: 1-218
Cow position: chrX:13058278-13058510 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 175

Conread position: 1-218
Cow position: chrX:15329367-15329576 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 1-218
Cow position: chrX:28111209-28111433 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 169

Conread position: 1-218
Cow position: chrX:35288374-35288583 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 26

Conread position: 1-218
Cow position: chrX:39546259-39546044 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 209, 77

Conread position: 1-219
Cow position: chrX:5423352-5423134 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-219
Cow position: chrX:11674772-11674993 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 48, 165

Conread position: 1-219
Cow position: chrX:15590158-15589942 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 88

Conread position: 1-219
Cow position: chrX:18293650-18293858 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 200, 21

Conread position: 1-219
Cow position: chrX:34990755-34990963 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 209, 94

Conread position: 1-220
Cow position: chrX:3387820-3388040 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-220
Cow position: chrX:7509851-7510070 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 153

Conread position: 1-220
Cow position: chrX:11981835-11982062 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 89

Conread position: 1-220
Cow position: chrX:19774766-19774547 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 217

Conread position: 1-220
Cow position: chrX:29760413-29760633 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 201, 0

Conread position: 1-220
Cow position: chrX:45043272-45043494 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 73

Conread position: 1-221
Cow position: chrX:2300645-2300857 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 152

Conread position: 1-221
Cow position: chrX:21064000-21064216 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 204, 125

Conread position: 1-221
Cow position: chrX:25237892-25238107 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 61

Conread position: 1-221
Cow position: chrX:32978543-32978323 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 42, 129

Conread position: 1-222
Cow position: chrX:43218106-43218337 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 177

Conread position: 1-224
Cow position: chrX:21833599-21833823 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 213, 0

Conread position: 1-224
Cow position: chrX:48224472-48224250 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 201, 155

Conread position: 1-225
Cow position: chrX:4905275-4905052 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 88

Conread position: 1-225
Cow position: chrX:7277642-7277850 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 35

Conread position: 1-225
Cow position: chrX:16783208-16783426 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 213, 85

Conread position: 1-225
Cow position: chrX:18950031-18949806 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 213, 0

Conread position: 1-225
Cow position: chrX:25452263-25452481 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 1-225
Cow position: chrX:25946120-25945898 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 33

Conread position: 1-226
Cow position: chrX:5306313-5306539 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 0

Conread position: 1-226
Cow position: chrX:5866860-5867085 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 134

Conread position: 1-226
Cow position: chrX:8782458-8782684 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 88

Conread position: 1-226
Cow position: chrX:16046862-16047089 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 1-226
Cow position: chrX:16706513-16706742 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1-226
Cow position: chrX:16713911-16714136 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 184, 150

Conread position: 1-226
Cow position: chrX:19196804-19196578 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 32

Conread position: 1-226
Cow position: chrX:20021277-20021503 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-226
Cow position: chrX:22567246-22567472 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 201, 0

Conread position: 1-226
Cow position: chrX:25288965-25288739 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 0

Conread position: 1-226
Cow position: chrX:26759855-26759629 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 0

Conread position: 1-226
Cow position: chrX:27759421-27759647 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-226
Cow position: chrX:28632764-28632548 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 1-226
Cow position: chrX:30171996-30171770 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-226
Cow position: chrX:39731227-39731453 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-226
Cow position: chrX:43101241-43101467 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 201, 0

Conread position: 1-226
Cow position: chrX:43979332-43979560 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 185, 0

Conread position: 1-227
Cow position: chrX:6652358-6652131 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-227
Cow position: chrX:34761780-34762007 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-227
Cow position: chrX:36240109-36240336 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-228
Cow position: chrX:361739-361513 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:1781619-1781846 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 187, 218

Conread position: 1-228
Cow position: chrX:2362213-2362439 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:3078873-3078648 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 210, 123

Conread position: 1-228
Cow position: chrX:3157332-3157558 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 210, 217

Conread position: 1-228
Cow position: chrX:9018589-9018363 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:10495947-10496173 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:11358351-11358125 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:11860528-11860302 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 210, 217

Conread position: 1-228
Cow position: chrX:12001433-12001207 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:12032685-12032911 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:13447984-13448210 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:15346255-15346029 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:22557215-22557441 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:23047494-23047718 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 158

Conread position: 1-228
Cow position: chrX:23109476-23109699 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 19

Conread position: 1-228
Cow position: chrX:23140027-23140249 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 1-228
Cow position: chrX:24577851-24577625 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:24903798-24904024 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:29844762-29844536 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:30899674-30899447 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 218

Conread position: 1-228
Cow position: chrX:31605398-31605624 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:33764058-33764284 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:37958211-37958437 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 217

Conread position: 1-228
Cow position: chrX:39667479-39667253 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 217

Conread position: 1-229
Cow position: chrX:1331646-1331878 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 1-229
Cow position: chrX:23451457-23451226 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 184, 0

Conread position: 1-230
Cow position: chrX:22821128-22821358 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 77

Conread position: 1-230
Cow position: chrX:29169620-29169389 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 201, 0

Conread position: 1-231
Cow position: chrX:25618204-25617964 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 1-231
Cow position: chrX:32039129-32038900 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 201, 217

Conread position: 1-232
Cow position: chrX:28866275-28866058 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 208, 33

Conread position: 1-234
Cow position: chrX:1550664-1550898 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 213, 0

Conread position: 1-234
Cow position: chrX:2160479-2160713 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:2478913-2478680 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 98, 60

Conread position: 1-234
Cow position: chrX:2945154-2944920 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 213, 0

Conread position: 1-234
Cow position: chrX:5599264-5599030 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:6196040-6195806 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:7755615-7755849 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:10528060-10527827 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 201, 136

Conread position: 1-234
Cow position: chrX:11949779-11949549 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 98, 88

Conread position: 1-234
Cow position: chrX:12179682-12179909 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 74

Conread position: 1-234
Cow position: chrX:14463027-14463261 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:15505005-15505239 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:15561101-15560866 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 1-234
Cow position: chrX:16478616-16478850 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:16735238-16735472 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:17055283-17055517 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:17995173-17995407 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:18024753-18024987 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:22538240-22538008 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 214, 152

Conread position: 1-234
Cow position: chrX:25458923-25458689 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 213, 0

Conread position: 1-234
Cow position: chrX:27404231-27403998 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 6

Conread position: 1-234
Cow position: chrX:27469940-27469706 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:27498482-27498716 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 213, 0

Conread position: 1-234
Cow position: chrX:28518010-28517777 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 201, 73

Conread position: 1-234
Cow position: chrX:29777756-29777989 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 40

Conread position: 1-234
Cow position: chrX:29848917-29848685 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 98, 88

Conread position: 1-234
Cow position: chrX:29913053-29913287 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 168, 186

Conread position: 1-234
Cow position: chrX:30159297-30159063 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:30228397-30228163 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 213, 0

Conread position: 1-234
Cow position: chrX:30686882-30686645 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 1-234
Cow position: chrX:32188645-32188415 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 138

Conread position: 1-234
Cow position: chrX:36195806-36196040 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:38151402-38151637 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 77

Conread position: 1-234
Cow position: chrX:41488451-41488217 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:46606796-46606565 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 206, 82

Conread position: 1-234
Cow position: chrX:47318120-47318354 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-234
Cow position: chrX:48165237-48165471 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 94, 87

Conread position: 1-235
Cow position: chrX:151615-151849 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 200, 128

Conread position: 1-235
Cow position: chrX:4044144-4043910 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 92

Conread position: 1-235
Cow position: chrX:7695477-7695693 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 213, 38

Conread position: 1-235
Cow position: chrX:14781631-14781396 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 232

Conread position: 1-235
Cow position: chrX:20582744-20582972 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 213, 155

Conread position: 1-235
Cow position: chrX:21227186-21227419 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 164

Conread position: 1-235
Cow position: chrX:21768518-21768753 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 228

Conread position: 1-235
Cow position: chrX:23583272-23583506 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 180, 187

Conread position: 1-235
Cow position: chrX:24125357-24125124 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 213, 77

Conread position: 1-235
Cow position: chrX:26625971-26625726 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 224

Conread position: 1-235
Cow position: chrX:35268604-35268826 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 208, 100

Conread position: 1-235
Cow position: chrX:35633039-35632807 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 113, 45

Conread position: 1-235
Cow position: chrX:36250148-36249917 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 214, 149

Conread position: 1-235
Cow position: chrX:38072053-38071820 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 139, 27

Conread position: 1-235
Cow position: chrX:41122786-41123012 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 212, 77

Conread position: 1-235
Cow position: chrX:42855125-42855359 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 38

Conread position: 1-235
Cow position: chrX:44087018-44087254 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 1-235
Cow position: chrX:45373578-45373343 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 213, 107

Conread position: 1-235
Cow position: chrX:45501862-45502095 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 204, 213

Conread position: 1-235
Cow position: chrX:47211136-47210899 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 1-236
Cow position: chrX:19674362-19674597 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 201, 227

Conread position: 1-237
Cow position: chrX:48370810-48371046 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 92, 172

Conread position: 1-239
Cow position: chrX:29915511-29915272 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 24

Conread position: 1-245
Cow position: chrX:11820072-11820311 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 88

Conread position: 1-245
Cow position: chrX:19290486-19290719 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 88

Conread position: 1-245
Cow position: chrX:26619648-26619407 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 1-247
Cow position: chrX:17964801-17964562 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 221, 44

Conread position: 1-247
Cow position: chrX:37843434-37843679 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 204, 158

Conread position: 1-247
Cow position: chrX:41238649-41238414 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 226, 77

Conread position: 1-247
Cow position: chrX:42470223-42469986 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 146, 0

Conread position: 1-249
Cow position: chrX:754672-754921 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 214, 0

Conread position: 1-249
Cow position: chrX:1576549-1576300 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:2274631-2274880 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:5288973-5288724 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:6566788-6567037 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:7444798-7445046 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 201, 155

Conread position: 1-249
Cow position: chrX:7486578-7486827 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 33

Conread position: 1-249
Cow position: chrX:7806092-7806338 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 22

Conread position: 1-249
Cow position: chrX:8591254-8591508 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 1-249
Cow position: chrX:8641502-8641750 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 155

Conread position: 1-249
Cow position: chrX:9085619-9085370 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:10351575-10351824 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:11145624-11145375 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 88

Conread position: 1-249
Cow position: chrX:11663892-11664141 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 201, 217

Conread position: 1-249
Cow position: chrX:11672495-11672744 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:12145809-12146057 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 201, 48

Conread position: 1-249
Cow position: chrX:12458412-12458661 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 197, 0

Conread position: 1-249
Cow position: chrX:12776272-12776024 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 201, 179

Conread position: 1-249
Cow position: chrX:12850846-12851095 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:13385121-13385370 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 200, 0

Conread position: 1-249
Cow position: chrX:14221797-14222042 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 213, 68

Conread position: 1-249
Cow position: chrX:14598559-14598808 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:15172813-15172570 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 1-249
Cow position: chrX:15259905-15259656 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:15531441-15531192 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:16285923-16286172 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 210, 228

Conread position: 1-249
Cow position: chrX:18462261-18462013 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-249
Cow position: chrX:18656091-18655842 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:19022595-19022346 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:22613100-22613349 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:24413744-24413993 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:24757983-24757734 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:24769146-24768901 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 79

Conread position: 1-249
Cow position: chrX:24969102-24968853 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:25276785-25276536 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:26229794-26229551 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 64

Conread position: 1-249
Cow position: chrX:27422567-27422319 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 79

Conread position: 1-249
Cow position: chrX:27594466-27594219 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 48

Conread position: 1-249
Cow position: chrX:29356301-29356550 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:30162711-30162955 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 230, 77

Conread position: 1-249
Cow position: chrX:30816555-30816306 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 201, 217

Conread position: 1-249
Cow position: chrX:30822298-30822547 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:30981451-30981202 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:31978131-31977883 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 201, 12

Conread position: 1-249
Cow position: chrX:34285350-34285100 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 1-249
Cow position: chrX:34333486-34333237 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:34413490-34413739 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:34519440-34519689 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:35612830-35612582 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 52

Conread position: 1-249
Cow position: chrX:35803528-35803777 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 201, 228

Conread position: 1-249
Cow position: chrX:38442676-38442925 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:42121017-42121266 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:42459886-42460143 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-249
Cow position: chrX:42591439-42591688 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 0

Conread position: 1-249
Cow position: chrX:44557793-44558042 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 33

Conread position: 1-249
Cow position: chrX:45414586-45414342 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 214, 155

Conread position: 1-249
Cow position: chrX:46297374-46297623 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 180, 187

Conread position: 1-250
Cow position: chrX:6413760-6414007 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 198, 122

Conread position: 1-250
Cow position: chrX:10428254-10428503 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 98, 27

Conread position: 1-250
Cow position: chrX:14884250-14883999 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 215

Conread position: 1-250
Cow position: chrX:23572086-23571836 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 0

Conread position: 1-250
Cow position: chrX:30543568-30543329 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 1-250
Cow position: chrX:45113350-45113578 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 207, 33

Conread position: 1-250
Cow position: chrX:45412938-45412700 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 200, 33

Conread position: 1-250
Cow position: chrX:46723027-46722775 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 1-251
Cow position: chrX:35937355-35937120 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 1-252
Cow position: chrX:11581649-11581906 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 136, 14

Conread position: 1-252
Cow position: chrX:22482975-22482725 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 165, 0

Conread position: 1-252
Cow position: chrX:27590319-27590074 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 201, 34

Conread position: 1-252
Cow position: chrX:37072120-37072368 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 212, 77

Conread position: 1-253
Cow position: chrX:9012041-9012295 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 169, 193

Conread position: 1-255
Cow position: chrX:4123549-4123802 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 184

Conread position: 1-255
Cow position: chrX:44835102-44834845 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 178, 190

Conread position: 1-257
Cow position: chrX:7118930-7118674 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-257
Cow position: chrX:40452499-40452243 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 213

Conread position: 1-257
Cow position: chrX:44192728-44192483 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 180, 36

Conread position: 1-258
Cow position: chrX:917656-917398 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 84

Conread position: 1-258
Cow position: chrX:1616337-1616077 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 65, 216

Conread position: 1-258
Cow position: chrX:2425408-2425150 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 98, 88

Conread position: 1-258
Cow position: chrX:3653477-3653726 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 213, 150

Conread position: 1-258
Cow position: chrX:4633137-4632884 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 22

Conread position: 1-258
Cow position: chrX:5017692-5017447 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 1-258
Cow position: chrX:5638454-5638201 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 126, 30

Conread position: 1-258
Cow position: chrX:6234721-6234485 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 213, 66

Conread position: 1-258
Cow position: chrX:6543970-6544222 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 213, 158

Conread position: 1-258
Cow position: chrX:7054021-7053763 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 42

Conread position: 1-258
Cow position: chrX:7508840-7509109 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 130

Conread position: 1-258
Cow position: chrX:7718570-7718821 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 78, 33

Conread position: 1-258
Cow position: chrX:10412272-10412019 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 95

Conread position: 1-258
Cow position: chrX:10831798-10831526 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 97, 228

Conread position: 1-258
Cow position: chrX:10866153-10865900 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 140, 77

Conread position: 1-258
Cow position: chrX:11844524-11844281 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 204, 33

Conread position: 1-258
Cow position: chrX:13785664-13785396 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 162

Conread position: 1-258
Cow position: chrX:14162905-14163163 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 98, 89

Conread position: 1-258
Cow position: chrX:14924714-14924968 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 106

Conread position: 1-258
Cow position: chrX:15120175-15119917 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 218

Conread position: 1-258
Cow position: chrX:15485911-15485657 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 33

Conread position: 1-258
Cow position: chrX:16703384-16703642 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 213, 0

Conread position: 1-258
Cow position: chrX:16711668-16711926 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 213, 0

Conread position: 1-258
Cow position: chrX:17497810-17498052 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 1-258
Cow position: chrX:18078196-18077938 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 213, 0

Conread position: 1-258
Cow position: chrX:18194627-18194883 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 213, 147

Conread position: 1-258
Cow position: chrX:18695207-18694957 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 153

Conread position: 1-258
Cow position: chrX:18999612-18999856 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 214, 76

Conread position: 1-258
Cow position: chrX:20340177-20339922 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 99, 93

Conread position: 1-258
Cow position: chrX:20709789-20710042 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 200, 38

Conread position: 1-258
Cow position: chrX:20801492-20801742 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 58

Conread position: 1-258
Cow position: chrX:20945282-20945532 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 88

Conread position: 1-258
Cow position: chrX:21415802-21416065 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 95, 173

Conread position: 1-258
Cow position: chrX:21593000-21593255 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 37

Conread position: 1-258
Cow position: chrX:21785482-21785735 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 98, 14

Conread position: 1-258
Cow position: chrX:22493721-22493979 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 193, 217

Conread position: 1-258
Cow position: chrX:23024418-23024673 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 98, 56

Conread position: 1-258
Cow position: chrX:23299668-23299926 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 213, 0

Conread position: 1-258
Cow position: chrX:23386825-23386575 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 213, 77

Conread position: 1-258
Cow position: chrX:23396320-23396570 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 213, 77

Conread position: 1-258
Cow position: chrX:24441533-24441275 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 98, 88

Conread position: 1-258
Cow position: chrX:25337891-25338152 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 54, 0

Conread position: 1-258
Cow position: chrX:26531672-26531930 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 173, 155

Conread position: 1-258
Cow position: chrX:27442838-27442588 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 201, 33

Conread position: 1-258
Cow position: chrX:28847162-28846914 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 213, 33

Conread position: 1-258
Cow position: chrX:30133610-30133353 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 156, 112

Conread position: 1-258
Cow position: chrX:30143570-30143313 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 201, 27

Conread position: 1-258
Cow position: chrX:30454908-30454650 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 213, 0

Conread position: 1-258
Cow position: chrX:30823230-30823488 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 40

Conread position: 1-258
Cow position: chrX:31202554-31202812 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 213, 0

Conread position: 1-258
Cow position: chrX:31489226-31489487 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 201, 97

Conread position: 1-258
Cow position: chrX:32094736-32094478 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 98, 88

Conread position: 1-258
Cow position: chrX:32171168-32170920 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 204, 135

Conread position: 1-258
Cow position: chrX:34192395-34192638 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 213, 20

Conread position: 1-258
Cow position: chrX:34238435-34238682 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 200, 76

Conread position: 1-258
Cow position: chrX:34565014-34565248 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 1-258
Cow position: chrX:35240578-35240834 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 98, 77

Conread position: 1-258
Cow position: chrX:38007054-38006797 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 200

Conread position: 1-258
Cow position: chrX:38094811-38094554 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 77

Conread position: 1-258
Cow position: chrX:38936413-38936664 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 44, 80

Conread position: 1-258
Cow position: chrX:38967366-38967615 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 23

Conread position: 1-258
Cow position: chrX:40544896-40544636 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 48, 90

Conread position: 1-258
Cow position: chrX:40557962-40557714 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 213, 142

Conread position: 1-258
Cow position: chrX:41103502-41103758 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 98, 88

Conread position: 1-258
Cow position: chrX:41157025-41157283 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 98, 88

Conread position: 1-258
Cow position: chrX:41790726-41790478 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 1-258
Cow position: chrX:41879216-41878965 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 148, 6

Conread position: 1-258
Cow position: chrX:42247462-42247219 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 1-258
Cow position: chrX:42462034-42461777 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 157

Conread position: 1-258
Cow position: chrX:43527217-43527477 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 199, 158

Conread position: 1-258
Cow position: chrX:43983884-43984145 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 227

Conread position: 1-258
Cow position: chrX:44054519-44054774 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 102, 33

Conread position: 1-258
Cow position: chrX:45786844-45787098 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 88, 0

Conread position: 1-259
Cow position: chrX:7178626-7178866 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 213, 33

Conread position: 1-259
Cow position: chrX:12309674-12309417 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 33

Conread position: 1-259
Cow position: chrX:30950242-30950500 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-259
Cow position: chrX:36778119-36778380 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 1-259
Cow position: chrX:37232126-37232381 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 208, 33

Conread position: 1-259
Cow position: chrX:47386217-47385960 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 40

Conread position: 1-259
Cow position: chrX:47967314-47967569 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 204, 50

Conread position: 1-260
Cow position: chrX:828606-828860 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 27

Conread position: 1-260
Cow position: chrX:2499626-2499370 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 169
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 88

Conread position: 1-260
Cow position: chrX:3417425-3417167 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 201, 155

Conread position: 1-260
Cow position: chrX:3895262-3895003 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:4343463-4343722 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:4869257-4869516 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 98, 88

Conread position: 1-260
Cow position: chrX:5123647-5123388 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 197, 251

Conread position: 1-260
Cow position: chrX:5320004-5319743 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 253

Conread position: 1-260
Cow position: chrX:5739499-5739240 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 205, 251

Conread position: 1-260
Cow position: chrX:6372895-6373153 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 155

Conread position: 1-260
Cow position: chrX:6869849-6869589 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 153, 252

Conread position: 1-260
Cow position: chrX:8434493-8434234 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 168
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:8530254-8530513 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:10932386-10932645 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 38, 33

Conread position: 1-260
Cow position: chrX:13971513-13971254 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:14122038-14121779 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:14134189-14134448 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:14801104-14800845 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 156

Conread position: 1-260
Cow position: chrX:14846360-14846101 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 98, 88

Conread position: 1-260
Cow position: chrX:15438935-15438680 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 33

Conread position: 1-260
Cow position: chrX:15577927-15577668 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:16359295-16359042 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 201, 50

Conread position: 1-260
Cow position: chrX:16466014-16466274 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 252

Conread position: 1-260
Cow position: chrX:17783213-17783472 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 33

Conread position: 1-260
Cow position: chrX:19473447-19473187 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 90, 252

Conread position: 1-260
Cow position: chrX:20038504-20038247 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 88

Conread position: 1-260
Cow position: chrX:20617083-20616824 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:20742700-20742959 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 98, 88

Conread position: 1-260
Cow position: chrX:20887930-20887677 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 202, 77

Conread position: 1-260
Cow position: chrX:21686334-21686587 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 201, 50

Conread position: 1-260
Cow position: chrX:22078041-22078300 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:22772369-22772628 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 88

Conread position: 1-260
Cow position: chrX:23215821-23216080 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:26275853-26276112 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:27305640-27305899 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:28157199-28157466 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 126, 174

Conread position: 1-260
Cow position: chrX:29903456-29903716 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 146, 252

Conread position: 1-260
Cow position: chrX:31250105-31250356 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 87

Conread position: 1-260
Cow position: chrX:32010745-32011004 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:33466331-33466578 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 1-260
Cow position: chrX:35533565-35533824 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:37816302-37816561 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:38230553-38230294 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 251

Conread position: 1-260
Cow position: chrX:39714263-39714522 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 98, 88

Conread position: 1-260
Cow position: chrX:45903892-45904151 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 251

Conread position: 1-261
Cow position: chrX:21749745-21749495 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 136

Conread position: 1-262
Cow position: chrX:39174499-39174242 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 77

Conread position: 1-263
Cow position: chrX:20878049-20877783 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 98, 77

Conread position: 1-264
Cow position: chrX:21062930-21063195 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 189, 155

Conread position: 1-265
Cow position: chrX:1810447-1810186 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 199, 77

Conread position: 1-265
Cow position: chrX:3649094-3648837 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 33

Conread position: 1-265
Cow position: chrX:5353589-5353320 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 98, 88

Conread position: 1-265
Cow position: chrX:6655553-6655285 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 201, 0

Conread position: 1-265
Cow position: chrX:7551081-7550814 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 201, 77

Conread position: 1-265
Cow position: chrX:9096381-9096647 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 173, 77

Conread position: 1-265
Cow position: chrX:12466209-12466475 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 188, 132

Conread position: 1-265
Cow position: chrX:23264723-23264455 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 98, 88

Conread position: 1-265
Cow position: chrX:25741400-25741132 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 213, 0

Conread position: 1-265
Cow position: chrX:27095833-27096092 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 89

Conread position: 1-265
Cow position: chrX:27977115-27976849 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 88

Conread position: 1-265
Cow position: chrX:37133820-37133552 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 201, 0

Conread position: 1-265
Cow position: chrX:37489432-37489700 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 165

Conread position: 1-265
Cow position: chrX:38218432-38218685 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 257, 33

Conread position: 1-266
Cow position: chrX:35041936-35042199 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 177, 33

Conread position: 1-267
Cow position: chrX:671295-671029 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 250

Conread position: 1-267
Cow position: chrX:21665877-21665615 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 207, 23

Conread position: 1-267
Cow position: chrX:27705307-27705566 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 213, 89

Conread position: 1-267
Cow position: chrX:36535021-36534755 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-267
Cow position: chrX:39559938-39559672 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 98, 77

Conread position: 1-267
Cow position: chrX:46033004-46032745 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 207, 77

Conread position: 1-272
Cow position: chrX:10306387-10306658 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 184, 33

Conread position: 1-272
Cow position: chrX:12249515-12249784 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 136

Conread position: 1-272
Cow position: chrX:13648070-13647802 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 212, 142

Conread position: 1-272
Cow position: chrX:19015156-19015417 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 213, 140

Conread position: 1-272
Cow position: chrX:29289290-29289563 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 214, 221

Conread position: 1-272
Cow position: chrX:31436194-31436460 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 78, 152

Conread position: 1-272
Cow position: chrX:40269190-40269472 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 221

Conread position: 1-272
Cow position: chrX:42171582-42171312 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 214, 33

Conread position: 1-273
Cow position: chrX:14819426-14819703 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 135, 275

Conread position: 1-273
Cow position: chrX:22812776-22813052 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 83

Conread position: 1-273
Cow position: chrX:31729172-31729427 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 256, 97

Conread position: 1-273
Cow position: chrX:34454383-34454650 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 204, 123

Conread position: 1-273
Cow position: chrX:41403675-41403964 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-273
Cow position: chrX:41410223-41410512 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-275
Cow position: chrX:12115755-12116033 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 84, 54

Conread position: 1-275
Cow position: chrX:15007437-15007162 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 213, 132

Conread position: 1-275
Cow position: chrX:19188650-19188925 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 165

Conread position: 1-275
Cow position: chrX:26441066-26440790 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 165

Conread position: 1-275
Cow position: chrX:31294826-31294576 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 257, 45

Conread position: 1-275
Cow position: chrX:34502637-34502909 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 212, 33

Conread position: 1-275
Cow position: chrX:41743627-41743899 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 213, 78

Conread position: 1-275
Cow position: chrX:42994328-42994600 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 125

Conread position: 1-276
Cow position: chrX:15147470-15147199 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 208, 17

Conread position: 1-276
Cow position: chrX:27446405-27446684 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 201, 33

Conread position: 1-276
Cow position: chrX:35224016-35224284 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 180, 74

Conread position: 1-276
Cow position: chrX:38439187-38439466 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 214

Conread position: 1-277
Cow position: chrX:23564083-23563801 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 1-280
Cow position: chrX:33020200-33020476 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 204, 77

Conread position: 1-282
Cow position: chrX:32743252-32743529 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 206, 158

Conread position: 1-287
Cow position: chrX:7571620-7571904 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 256, 150

Conread position: 1-288
Cow position: chrX:11718066-11717788 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 257, 77

Conread position: 1-289
Cow position: chrX:13868411-13868704 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 198, 33

Conread position: 1-289
Cow position: chrX:38227376-38227092 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 207, 146

Conread position: 1-290
Cow position: chrX:2786832-2786555 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 70

Conread position: 1-290
Cow position: chrX:34441733-34441449 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 33

Conread position: 1-291
Cow position: chrX:8796964-8797258 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 39

Conread position: 1-291
Cow position: chrX:27516247-27516532 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 45

Conread position: 1-291
Cow position: chrX:35609700-35609992 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 157

Conread position: 1-291
Cow position: chrX:46532806-46532495 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 41, 89

Conread position: 1-292
Cow position: chrX:5872030-5872324 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 199, 37

Conread position: 1-295
Cow position: chrX:48195327-48195030 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 204, 160

Conread position: 1-301
Cow position: chrX:13686431-13686736 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 143, 59

Conread position: 1-315
Cow position: chrX:14409673-14409355 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 201, 228

Conread position: 1-316
Cow position: chrX:47873627-47873305 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 205, 110

Conread position: 1-400
Cow position: chrX:9154074-9154474 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 201, 0

Conread position: 2-92
Cow position: chrX:3405640-3405552 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 2-143
Cow position: chrX:12437521-12437384 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 2-146
Cow position: chrX:45420960-45420814 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 2-149
Cow position: chrX:626329-626183 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 2-149
Cow position: chrX:12096532-12096386 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 76, 0

Conread position: 2-150
Cow position: chrX:17691975-17692123 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-160
Cow position: chrX:11973560-11973718 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-160
Cow position: chrX:39556101-39555943 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 133
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 145, 32

Conread position: 2-168
Cow position: chrX:24173453-24173287 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 145, 32

Conread position: 2-176
Cow position: chrX:24320557-24320387 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 22

Conread position: 2-179
Cow position: chrX:38331097-38331272 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 157, 0

Conread position: 2-204
Cow position: chrX:5280138-5279937 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 156, 136

Conread position: 2-204
Cow position: chrX:18118757-18118555 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 87

Conread position: 2-204
Cow position: chrX:24809255-24809054 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 2-204
Cow position: chrX:42841338-42841134 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 130

Conread position: 2-204
Cow position: chrX:48227900-48227700 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 159

Conread position: 2-205
Cow position: chrX:18990085-18989882 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 78

Conread position: 2-205
Cow position: chrX:27486126-27486324 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 2-206
Cow position: chrX:6659088-6659294 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 106, 92

Conread position: 2-206
Cow position: chrX:14407735-14407533 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 2-206
Cow position: chrX:27458970-27459175 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 83, 155

Conread position: 2-208
Cow position: chrX:12347593-12347799 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-212
Cow position: chrX:31373293-31373486 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 2-214
Cow position: chrX:39347071-39346859 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 116, 76

Conread position: 2-215
Cow position: chrX:24193824-24194032 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 166

Conread position: 2-216
Cow position: chrX:37403308-37403093 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 2-218
Cow position: chrX:6012392-6012177 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 180

Conread position: 2-221
Cow position: chrX:35409383-35409591 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 202, 78

Conread position: 2-221
Cow position: chrX:45430303-45430086 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 155

Conread position: 2-225
Cow position: chrX:27105973-27106197 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 213, 0

Conread position: 2-229
Cow position: chrX:24587739-24587511 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 87

Conread position: 2-233
Cow position: chrX:4996326-4996542 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 2-234
Cow position: chrX:2559245-2559016 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 2-234
Cow position: chrX:18897936-18897708 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 200, 88

Conread position: 2-235
Cow position: chrX:11082898-11082670 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 207, 76

Conread position: 2-249
Cow position: chrX:4622239-4621991 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 200, 0

Conread position: 2-249
Cow position: chrX:45967877-45968116 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 148

Conread position: 2-250
Cow position: chrX:11806302-11806054 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 212, 199

Conread position: 2-250
Cow position: chrX:40121300-40121055 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 97, 87

Conread position: 2-258
Cow position: chrX:1947006-1946744 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 87

Conread position: 2-258
Cow position: chrX:16289847-16289590 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 204, 0

Conread position: 2-258
Cow position: chrX:18244704-18244957 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 67

Conread position: 2-258
Cow position: chrX:20029962-20030224 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 169

Conread position: 2-258
Cow position: chrX:25035671-25035412 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 198, 30

Conread position: 2-258
Cow position: chrX:33639680-33639940 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 163

Conread position: 2-258
Cow position: chrX:34401713-34401965 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 9

Conread position: 2-258
Cow position: chrX:38963827-38964072 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 213, 39

Conread position: 2-258
Cow position: chrX:42086577-42086824 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 2-260
Cow position: chrX:26974625-26974883 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 200, 250

Conread position: 2-260
Cow position: chrX:29780460-29780714 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 138, 129

Conread position: 2-263
Cow position: chrX:42590043-42589784 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 167
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 256, 199

Conread position: 2-265
Cow position: chrX:6493447-6493709 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 52

Conread position: 2-265
Cow position: chrX:23122100-23122368 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 13

Conread position: 2-265
Cow position: chrX:34754477-34754212 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 2-265
Cow position: chrX:40827032-40826774 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 203, 125

Conread position: 2-273
Cow position: chrX:1055673-1055409 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 200, 87

Conread position: 2-273
Cow position: chrX:20697888-20697622 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 136, 32

Conread position: 2-273
Cow position: chrX:24105341-24105608 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 157

Conread position: 2-275
Cow position: chrX:7351017-7351288 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 32

Conread position: 2-275
Cow position: chrX:28134064-28134333 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 143, 39

Conread position: 2-275
Cow position: chrX:28845559-28845819 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 78

Conread position: 2-276
Cow position: chrX:7645973-7646241 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 83, 151

Conread position: 2-291
Cow position: chrX:878653-878378 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 212, 32

Conread position: 2-291
Cow position: chrX:45089152-45089452 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 113

Conread position: 2-291
Cow position: chrX:47344009-47344297 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 203, 179

Conread position: 2-292
Cow position: chrX:4269352-4269058 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 97, 27

Conread position: 3-156
Cow position: chrX:3207846-3207693 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-168
Cow position: chrX:28513788-28513952 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 3-194
Cow position: chrX:23081009-23081196 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 3-204
Cow position: chrX:2812696-2812495 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-204
Cow position: chrX:42585352-42585158 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 3-205
Cow position: chrX:38794442-38794643 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 159

Conread position: 3-206
Cow position: chrX:7382039-7382238 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 156, 0

Conread position: 3-206
Cow position: chrX:25302032-25301836 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 3-206
Cow position: chrX:41049829-41050034 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 3-214
Cow position: chrX:21795212-21795418 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 3-225
Cow position: chrX:24317782-24317999 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 185, 66

Conread position: 3-249
Cow position: chrX:24200914-24201145 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 204, 44

Conread position: 3-249
Cow position: chrX:46579139-46578892 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 199, 0

Conread position: 3-250
Cow position: chrX:35273060-35273314 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 75, 235

Conread position: 3-250
Cow position: chrX:35388191-35387943 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 212

Conread position: 3-258
Cow position: chrX:31260915-31260660 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 199

Conread position: 3-260
Cow position: chrX:29066157-29066410 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 199, 148

Conread position: 3-260
Cow position: chrX:45237182-45237439 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 199, 249

Conread position: 3-265
Cow position: chrX:32584097-32583831 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 199, 215

Conread position: 3-272
Cow position: chrX:23061170-23061418 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 204, 75

Conread position: 3-276
Cow position: chrX:9161304-9161573 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 251, 75

Conread position: 3-277
Cow position: chrX:3654324-3654598 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 256, 28

Conread position: 3-280
Cow position: chrX:15545613-15545884 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 80

Conread position: 3-288
Cow position: chrX:8899740-8900027 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 190, 281

Conread position: 3-291
Cow position: chrX:31949215-31948934 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 155

Conread position: 3-315
Cow position: chrX:38102728-38102413 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 96, 74

Conread position: 3-316
Cow position: chrX:40481157-40480838 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 78

Conread position: 4-165
Cow position: chrX:13923144-13923296 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 4-204
Cow position: chrX:17605844-17605644 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 4-234
Cow position: chrX:10293445-10293214 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 198, 0

Conread position: 4-258
Cow position: chrX:11655796-11656059 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 35, 204

Conread position: 4-290
Cow position: chrX:47481515-47481804 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 150

Conread position: 4-316
Cow position: chrX:2467597-2467909 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 48

Conread position: 5-149
Cow position: chrX:45410325-45410180 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 5-177
Cow position: chrX:12290454-12290626 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 146, 57

Conread position: 5-198
Cow position: chrX:32871068-32870876 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 5-204
Cow position: chrX:1978214-1978428 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 5-204
Cow position: chrX:9128774-9128973 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 5-204
Cow position: chrX:13069020-13068824 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 5-204
Cow position: chrX:22329853-22329657 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 168

Conread position: 5-205
Cow position: chrX:25848633-25848834 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 81

Conread position: 5-205
Cow position: chrX:46448110-46447914 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 23

Conread position: 5-219
Cow position: chrX:31556780-31556565 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 209, 0

Conread position: 5-235
Cow position: chrX:17794713-17794927 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 200, 29

Conread position: 5-258
Cow position: chrX:16762490-16762736 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 81, 41

Conread position: 6-152
Cow position: chrX:25587155-25587300 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 6-199
Cow position: chrX:33822820-33823011 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 72

Conread position: 6-217
Cow position: chrX:29907510-29907299 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 196, 28

Conread position: 6-228
Cow position: chrX:1749790-1749569 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 196, 212

Conread position: 6-248
Cow position: chrX:31443102-31442864 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 74

Conread position: 6-258
Cow position: chrX:15139823-15139578 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 28

Conread position: 6-258
Cow position: chrX:33855522-33855266 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 158

Conread position: 6-258
Cow position: chrX:34376676-34376913 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 208, 72

Conread position: 6-258
Cow position: chrX:37836308-37836556 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 28

Conread position: 6-275
Cow position: chrX:42874697-42874971 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 73

Conread position: 7-214
Cow position: chrX:20353347-20353138 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 92, 82

Conread position: 7-234
Cow position: chrX:39704424-39704642 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 207, 62

Conread position: 7-235
Cow position: chrX:13912799-13913019 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 153

Conread position: 7-235
Cow position: chrX:28097845-28098062 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 7-249
Cow position: chrX:22915185-22915429 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 7-249
Cow position: chrX:45399778-45399533 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 166, 155

Conread position: 7-255
Cow position: chrX:8730799-8731051 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 7-258
Cow position: chrX:161148-161380 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 207, 88

Conread position: 7-258
Cow position: chrX:9997611-9997368 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 198, 25

Conread position: 7-275
Cow position: chrX:34554450-34554713 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 62

Conread position: 7-282
Cow position: chrX:40647698-40647980 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 154, 71

Conread position: 8-258
Cow position: chrX:24424671-24424421 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 7

Conread position: 8-267
Cow position: chrX:14599253-14599512 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 61

Conread position: 8-272
Cow position: chrX:34532252-34532503 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 71, 61

Conread position: 9-206
Cow position: chrX:29010455-29010650 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 160, 102

Conread position: 9-215
Cow position: chrX:23703043-23702836 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 25

Conread position: 9-215
Cow position: chrX:33983884-33983677 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 193, 0

Conread position: 9-226
Cow position: chrX:34175476-34175258 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 193, 0

Conread position: 9-260
Cow position: chrX:26709326-26709577 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 193, 243

Conread position: 9-275
Cow position: chrX:8925428-8925688 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 89, 25

Conread position: 10-125
Cow position: chrX:39415518-39415633 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-131
Cow position: chrX:45375254-45375375 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-156
Cow position: chrX:48247112-48246968 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 81

Conread position: 10-160
Cow position: chrX:6675202-6675050 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 66

Conread position: 10-205
Cow position: chrX:48211258-48211062 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 33

Conread position: 10-257
Cow position: chrX:35413353-35413587 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 143

Conread position: 10-258
Cow position: chrX:27751512-27751266 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 79

Conread position: 10-258
Cow position: chrX:28105645-28105887 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 10-258
Cow position: chrX:42587706-42587461 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 123, 0

Conread position: 10-273
Cow position: chrX:12017998-12018277 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 128, 135

Conread position: 10-295
Cow position: chrX:30921908-30922192 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 136, 85

Conread position: 11-152
Cow position: chrX:12314078-12314219 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-205
Cow position: chrX:48800261-48800454 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 174, 54

Conread position: 11-206
Cow position: chrX:16531723-16531912 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 11-258
Cow position: chrX:44737267-44737018 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 138, 62

Conread position: 12-249
Cow position: chrX:158044-157816 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 203, 62

Conread position: 12-249
Cow position: chrX:22549029-22549267 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 190, 0

Conread position: 12-250
Cow position: chrX:2963775-2964013 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 87, 66

Conread position: 12-275
Cow position: chrX:47191670-47191424 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 246, 37

Conread position: 12-291
Cow position: chrX:34270141-34270404 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 204, 22

Conread position: 13-204
Cow position: chrX:45693832-45694020 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 0

Conread position: 14-191
Cow position: chrX:5856596-5856423 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 14-215
Cow position: chrX:15094093-15094295 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 188, 0

Conread position: 14-217
Cow position: chrX:16835204-16835408 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 188, 0

Conread position: 14-234
Cow position: chrX:37416348-37416129 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 200, 137

Conread position: 14-258
Cow position: chrX:40183623-40183376 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 189, 0

Conread position: 15-205
Cow position: chrX:488218-488405 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 15-206
Cow position: chrX:12865740-12865929 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 15-228
Cow position: chrX:41414056-41413844 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 187, 203

Conread position: 16-231
Cow position: chrX:19333440-19333226 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 186, 202

Conread position: 16-249
Cow position: chrX:22815670-22815904 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 186, 0

Conread position: 16-258
Cow position: chrX:10095755-10095997 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 220, 157

Conread position: 16-258
Cow position: chrX:27509292-27509056 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 14, 144

Conread position: 17-152
Cow position: chrX:11459830-11459695 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-227
Cow position: chrX:5300622-5300833 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 185, 0

Conread position: 17-235
Cow position: chrX:17541694-17541908 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 184, 61

Conread position: 17-272
Cow position: chrX:45404104-45403843 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 141, 147

Conread position: 18-206
Cow position: chrX:45787386-45787566 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 19-146
Cow position: chrX:45955913-45956039 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 20-196
Cow position: chrX:3096037-3095861 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 68

Conread position: 20-249
Cow position: chrX:17725711-17725932 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 185, 72

Conread position: 20-260
Cow position: chrX:2580132-2580372 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 182, 232

Conread position: 20-260
Cow position: chrX:20580019-20579778 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 166, 98

Conread position: 21-203
Cow position: chrX:26883401-26883220 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 138

Conread position: 22-179
Cow position: chrX:46680190-46680033 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 68

Conread position: 25-204
Cow position: chrX:27704515-27704336 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 25-214
Cow position: chrX:31473260-31473449 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 177

Conread position: 25-217
Cow position: chrX:36931056-36931246 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 177, 58

Conread position: 25-234
Cow position: chrX:22521361-22521151 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 177, 0

Conread position: 28-206
Cow position: chrX:19689959-19690136 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 28-234
Cow position: chrX:30245314-30245107 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 174, 0

Conread position: 28-235
Cow position: chrX:15596779-15596988 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 177, 51

Conread position: 28-258
Cow position: chrX:20151591-20151817 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 173, 123

Conread position: 29-160
Cow position: chrX:47247167-47247036 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 29-276
Cow position: chrX:32020380-32020131 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 176, 135

Conread position: 30-218
Cow position: chrX:46382033-46381849 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 183, 126

Conread position: 30-273
Cow position: chrX:48652988-48652736 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 52

Conread position: 31-258
Cow position: chrX:7496989-7497207 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 31-260
Cow position: chrX:46425009-46424781 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 60

Conread position: 34-228
Cow position: chrX:48536919-48536725 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 65

Conread position: 34-258
Cow position: chrX:28878415-28878202 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 42, 112

Conread position: 34-258
Cow position: chrX:41673850-41674077 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 6

Conread position: 34-265
Cow position: chrX:24366082-24365848 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 154, 34

Conread position: 34-272
Cow position: chrX:11073444-11073209 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 46, 128

Conread position: 34-272
Cow position: chrX:25816149-25815924 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 224, 117

Conread position: 35-249
Cow position: chrX:678820-678608 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 179, 152

Conread position: 35-291
Cow position: chrX:23497915-23497665 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 223, 44

Conread position: 36-215
Cow position: chrX:39520706-39520526 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 166, 0

Conread position: 37-215
Cow position: chrX:27325035-27324856 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 165, 0

Conread position: 37-234
Cow position: chrX:13177717-13177522 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 13

Conread position: 37-249
Cow position: chrX:5288407-5288194 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 165, 0

Conread position: 37-249
Cow position: chrX:22856782-22856995 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 165, 0

Conread position: 40-235
Cow position: chrX:27432166-27431970 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 107, 162

Conread position: 40-260
Cow position: chrX:9572276-9572496 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 162, 212

Conread position: 40-260
Cow position: chrX:9976189-9976409 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 162, 212

Conread position: 40-282
Cow position: chrX:6278753-6278506 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 160, 0

Conread position: 40-289
Cow position: chrX:17888652-17888418 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 218, 7

Conread position: 45-250
Cow position: chrX:40035693-40035484 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 129

Conread position: 45-272
Cow position: chrX:35284375-35284604 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 112

Conread position: 46-201
Cow position: chrX:20167963-20168117 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 133

Conread position: 46-204
Cow position: chrX:7541718-7541876 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 46-205
Cow position: chrX:27176561-27176398 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 46-205
Cow position: chrX:30729647-30729486 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 119

Conread position: 46-221
Cow position: chrX:21663068-21663245 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 163, 49

Conread position: 46-249
Cow position: chrX:23827348-23827552 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 156, 0

Conread position: 46-252
Cow position: chrX:34663080-34662886 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 159, 24

Conread position: 46-258
Cow position: chrX:9416934-9416726 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 167, 113

Conread position: 46-258
Cow position: chrX:9635422-9635218 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 46-258
Cow position: chrX:17631043-17630839 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 46-258
Cow position: chrX:19930416-19930618 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 46-258
Cow position: chrX:30833079-30832882 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 163, 33

Conread position: 46-258
Cow position: chrX:39558591-39558383 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 13, 116

Conread position: 46-260
Cow position: chrX:39938758-39938555 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 46-265
Cow position: chrX:47757170-47756951 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 155, 111

Conread position: 46-273
Cow position: chrX:40788962-40789194 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 162

Conread position: 47-168
Cow position: chrX:33519377-33519498 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 47-205
Cow position: chrX:8517636-8517791 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 47-205
Cow position: chrX:42011040-42011197 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 47-206
Cow position: chrX:2029150-2029308 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 47-214
Cow position: chrX:31745287-31745123 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 100, 124

Conread position: 47-221
Cow position: chrX:38935041-38935218 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 158, 0

Conread position: 47-221
Cow position: chrX:42499269-42499096 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 135, 111

Conread position: 47-234
Cow position: chrX:23970149-23970327 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 158, 32

Conread position: 47-249
Cow position: chrX:619248-619046 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 47-249
Cow position: chrX:9855060-9855263 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 167, 0

Conread position: 47-249
Cow position: chrX:9953901-9954104 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 167, 0

Conread position: 47-249
Cow position: chrX:34543547-34543746 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 159, 74

Conread position: 47-250
Cow position: chrX:47249028-47248825 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 126

Conread position: 47-252
Cow position: chrX:38642020-38642223 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 168, 32

Conread position: 47-258
Cow position: chrX:7425224-7425436 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 188

Conread position: 47-258
Cow position: chrX:21672311-21672523 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 168, 0

Conread position: 47-258
Cow position: chrX:23514258-23514048 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 80, 47

Conread position: 47-258
Cow position: chrX:25411600-25411808 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 87, 31

Conread position: 47-258
Cow position: chrX:26876121-26875916 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 158, 37

Conread position: 47-258
Cow position: chrX:33493535-33493744 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 47-258
Cow position: chrX:43049102-43049316 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 47-258
Cow position: chrX:44961507-44961716 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 52, 42

Conread position: 47-262
Cow position: chrX:2206784-2206579 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 166, 112

Conread position: 47-272
Cow position: chrX:41884658-41884430 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 167, 154

Conread position: 47-275
Cow position: chrX:16416268-16416495 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 154, 49

Conread position: 47-275
Cow position: chrX:27394254-27394035 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 211, 112

Conread position: 47-290
Cow position: chrX:21004444-21004683 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 162, 32

Conread position: 47-418
Cow position: chrX:44053018-44053384 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 235
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 160, 112

Conread position: 48-204
Cow position: chrX:8492997-8492841 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 48-249
Cow position: chrX:11939163-11938969 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 153, 50

Conread position: 48-290
Cow position: chrX:45598843-45598600 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 166, 145

Conread position: 49-235
Cow position: chrX:42492748-42492569 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 155, 21

Conread position: 49-258
Cow position: chrX:19019348-19019139 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 17

Conread position: 49-258
Cow position: chrX:41167202-41166997 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 165, 35

Conread position: 49-267
Cow position: chrX:32128218-32128011 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 160, 30

Conread position: 49-275
Cow position: chrX:27680165-27680382 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 160, 30

Conread position: 50-205
Cow position: chrX:9837901-9838056 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 50-258
Cow position: chrX:40116188-40116388 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 157, 35

Conread position: 50-274
Cow position: chrX:17662834-17662607 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 159, 164

Conread position: 51-258
Cow position: chrX:11589828-11589620 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 28

Conread position: 51-258
Cow position: chrX:20752027-20752222 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 149, 23

Conread position: 52-245
Cow position: chrX:22074565-22074754 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 52-276
Cow position: chrX:27514633-27514857 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 140, 182

Conread position: 53-214
Cow position: chrX:32623349-32623508 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 53-234
Cow position: chrX:6639890-6640073 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 107

Conread position: 53-238
Cow position: chrX:4942985-4942807 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 87

Conread position: 53-250
Cow position: chrX:7513282-7513473 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 162, 40

Conread position: 53-260
Cow position: chrX:2383255-2383457 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 154, 26

Conread position: 53-275
Cow position: chrX:38549214-38549434 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 205, 155

Conread position: 54-258
Cow position: chrX:9201314-9201517 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 155, 31

Conread position: 54-258
Cow position: chrX:17231501-17231700 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 148, 104

Conread position: 54-273
Cow position: chrX:36975716-36975935 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 146, 108

Conread position: 55-258
Cow position: chrX:41198872-41199072 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 103, 131

Conread position: 55-273
Cow position: chrX:48010362-48010586 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 146, 0

Conread position: 55-275
Cow position: chrX:13382092-13382317 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 55-275
Cow position: chrX:30963104-30962886 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 159, 96

Conread position: 55-275
Cow position: chrX:42339168-42338959 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 56-232
Cow position: chrX:5900226-5900397 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 172, 102

Conread position: 56-235
Cow position: chrX:14900952-14900779 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 56-276
Cow position: chrX:22821816-22822037 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 173, 157

Conread position: 57-256
Cow position: chrX:35542661-35542860 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 57-258
Cow position: chrX:7721754-7721956 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 116, 158

Conread position: 57-258
Cow position: chrX:37048811-37048610 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 157

Conread position: 57-276
Cow position: chrX:42381330-42381113 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 147, 99

Conread position: 58-234
Cow position: chrX:18812029-18812196 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 60-213
Cow position: chrX:34034970-34035121 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 108

Conread position: 60-259
Cow position: chrX:48684450-48684257 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 141, 91

Conread position: 60-275
Cow position: chrX:11856202-11856415 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 154, 37

Conread position: 62-258
Cow position: chrX:21642703-21642511 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 62-258
Cow position: chrX:29509669-29509474 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 144, 97

Conread position: 63-249
Cow position: chrX:16324187-16324006 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 138, 13

Conread position: 63-258
Cow position: chrX:17042466-17042660 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 144, 95

Conread position: 63-355
Cow position: chrX:10437889-10437601 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 150, 103

Conread position: 64-258
Cow position: chrX:16541899-16541704 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 141, 21

Conread position: 66-203
Cow position: chrX:23091660-23091793 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 66-258
Cow position: chrX:11633457-11633647 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 133, 93

Conread position: 67-276
Cow position: chrX:36283125-36283340 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 140, 0

Conread position: 67-291
Cow position: chrX:29602053-29601826 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 18, 32

Conread position: 75-269
Cow position: chrX:27174782-27174979 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 85

Conread position: 76-258
Cow position: chrX:29542430-29542252 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 140, 83

Conread position: 79-289
Cow position: chrX:9425950-9425742 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 130, 87

Conread position: 79-291
Cow position: chrX:38852988-38853200 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 135, 79

Conread position: 81-275
Cow position: chrX:46587611-46587807 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 77

Conread position: 98-258
Cow position: chrX:23785464-23785630 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 98-273
Cow position: chrX:33000714-33000888 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 108, 81

Conread position: 98-275
Cow position: chrX:43730404-43730235 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 111, 75

Conread position: 105-272
Cow position: chrX:32820847-32821014 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 95, 11

Show alignments to all cow chromosomes.