Cow genome map

Conread name: Ss1.1-Pig4-TMW8017F08.3

Conread position: 4-223
Cow position: chr14:41486350-41486140 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 4-290
Cow position: chr14:48838507-48838786 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 24

Conread position: 4-301
Cow position: chr14:36437576-36437285 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 61

Conread position: 4-303
Cow position: chr14:26628613-26628318 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 25

Conread position: 4-309
Cow position: chr14:19394271-19394570 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 55

Conread position: 4-310
Cow position: chr14:10609590-10609901 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 202
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 26

Conread position: 4-310
Cow position: chr14:27848095-27848408 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 114, 26

Conread position: 4-310
Cow position: chr14:28115278-28114975 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 49

Conread position: 4-310
Cow position: chr14:28304874-28304578 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 26

Conread position: 4-310
Cow position: chr14:37131572-37131866 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 172, 26

Conread position: 4-310
Cow position: chr14:39618466-39618164 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 26

Conread position: 4-327
Cow position: chr14:8749985-8750303 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 81

Conread position: 5-297
Cow position: chr14:33714764-33714485 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 29, 54

Conread position: 5-301
Cow position: chr14:20826401-20826677 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 5-309
Cow position: chr14:1803208-1802905 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 26

Conread position: 5-309
Cow position: chr14:15055080-15054779 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 230, 24

Conread position: 5-310
Cow position: chr14:33830213-33830508 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 227, 27

Conread position: 5-310
Cow position: chr14:40165335-40165630 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 26

Conread position: 6-310
Cow position: chr14:28987617-28987903 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 24

Conread position: 6-310
Cow position: chr14:35420854-35420550 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 58

Conread position: 7-176
Cow position: chr14:45577179-45577012 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 7-294
Cow position: chr14:15492498-15492791 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 8, 151

Conread position: 7-301
Cow position: chr14:33751449-33751724 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 12, 85

Conread position: 7-303
Cow position: chr14:41749846-41749554 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 206, 23

Conread position: 7-309
Cow position: chr14:3194779-3195058 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 25

Conread position: 7-309
Cow position: chr14:26433327-26433034 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 7-310
Cow position: chr14:18345814-18345522 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 291, 25

Conread position: 7-310
Cow position: chr14:20712774-20712476 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 217, 26

Conread position: 7-310
Cow position: chr14:23682177-23682472 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 62, 29

Conread position: 7-310
Cow position: chr14:24416794-24417095 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 23

Conread position: 7-310
Cow position: chr14:26442427-26442131 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 23

Conread position: 7-310
Cow position: chr14:32452160-32452464 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 13, 140

Conread position: 7-310
Cow position: chr14:41479749-41479449 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 25

Conread position: 7-310
Cow position: chr14:48426982-48427284 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 96

Conread position: 8-290
Cow position: chr14:16550089-16549813 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 24

Conread position: 8-303
Cow position: chr14:19618836-19618548 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 215, 22

Conread position: 8-309
Cow position: chr14:4990916-4991205 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 216, 24

Conread position: 8-309
Cow position: chr14:28003881-28004187 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 55

Conread position: 8-310
Cow position: chr14:25986429-25986728 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 21

Conread position: 8-310
Cow position: chr14:40432843-40433130 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 216, 34

Conread position: 8-310
Cow position: chr14:47672968-47672674 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 217, 113

Conread position: 8-310
Cow position: chr14:50362708-50363009 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 22

Conread position: 8-311
Cow position: chr14:40230721-40230428 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 21

Conread position: 9-174
Cow position: chr14:29734450-29734285 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 47

Conread position: 9-303
Cow position: chr14:13845901-13846191 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 150, 20

Conread position: 9-305
Cow position: chr14:45677143-45677429 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 123

Conread position: 9-309
Cow position: chr14:20640715-20640417 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 104

Conread position: 9-310
Cow position: chr14:13042672-13042969 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 213, 90

Conread position: 9-310
Cow position: chr14:20110807-20110512 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 9-310
Cow position: chr14:33791107-33791397 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 19

Conread position: 9-311
Cow position: chr14:16760313-16760608 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 68, 138

Conread position: 9-327
Cow position: chr14:38144192-38143884 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 21

Conread position: 10-304
Cow position: chr14:19863518-19863230 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 20

Conread position: 11-152
Cow position: chr14:4848265-4848404 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 19

Conread position: 11-308
Cow position: chr14:22988951-22989240 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 213, 19

Conread position: 11-310
Cow position: chr14:19188960-19189247 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 19

Conread position: 11-310
Cow position: chr14:25779018-25779302 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 20

Conread position: 11-310
Cow position: chr14:39918829-39918552 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 213, 19

Conread position: 11-310
Cow position: chr14:42155057-42154753 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 85

Conread position: 11-329
Cow position: chr14:10078184-10078497 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 163, 143

Conread position: 12-309
Cow position: chr14:41210771-41211063 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 42, 144

Conread position: 13-296
Cow position: chr14:4877310-4877034 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 17

Conread position: 13-302
Cow position: chr14:12520383-12520105 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 16

Conread position: 13-303
Cow position: chr14:34199924-34199640 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 210, 17

Conread position: 13-307
Cow position: chr14:33247510-33247225 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 211, 17

Conread position: 14-310
Cow position: chr14:32371820-32371535 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 210, 15

Conread position: 15-209
Cow position: chr14:24945571-24945383 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 14

Conread position: 15-233
Cow position: chr14:19359808-19360023 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 55, 161

Conread position: 15-306
Cow position: chr14:39037147-39037444 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 15

Conread position: 15-380
Cow position: chr14:29632959-29632600 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 203, 17

Conread position: 17-310
Cow position: chr14:27592033-27591743 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 13

Conread position: 19-306
Cow position: chr14:19372264-19372548 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 205, 13

Conread position: 19-311
Cow position: chr14:16256684-16256978 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 77, 11

Conread position: 23-309
Cow position: chr14:17841362-17841079 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 201, 7

Conread position: 32-309
Cow position: chr14:38168629-38168891 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 26

Conread position: 32-310
Cow position: chr14:39770290-39770022 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 192, 52

Conread position: 39-310
Cow position: chr14:39778696-39778961 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 120, 0

Conread position: 39-318
Cow position: chr14:15997821-15997548 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 222, 116

Conread position: 52-310
Cow position: chr14:34083208-34082945 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 156

Conread position: 62-308
Cow position: chr14:39775083-39774845 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 162, 22

Conread position: 62-310
Cow position: chr14:18904639-18904400 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 160, 39

Conread position: 67-296
Cow position: chr14:24607939-24608163 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 120, 36

Conread position: 67-297
Cow position: chr14:3162699-3162907 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 67-303
Cow position: chr14:5835884-5836105 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 67-310
Cow position: chr14:24796461-24796216 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 143, 88

Conread position: 67-310
Cow position: chr14:35018781-35018544 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 67-310
Cow position: chr14:41325475-41325229 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 102, 87

Conread position: 68-301
Cow position: chr14:9308203-9308426 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 165, 56

Conread position: 68-310
Cow position: chr14:25002008-25002244 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 161, 78

Conread position: 68-313
Cow position: chr14:11615248-11615009 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 156, 78

Conread position: 71-309
Cow position: chr14:20563258-20563019 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 57

Conread position: 71-310
Cow position: chr14:11043515-11043282 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 183, 82

Conread position: 71-310
Cow position: chr14:26859758-26859513 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 131

Conread position: 84-308
Cow position: chr14:42596372-42596586 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 154, 45

Conread position: 117-310
Cow position: chr14:21284644-21284838 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 33

Conread position: 121-302
Cow position: chr14:11820094-11819920 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 102, 33

Conread position: 123-310
Cow position: chr14:8964576-8964751 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 124-309
Cow position: chr14:35544488-35544308 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 125, 22

Conread position: 155-304
Cow position: chr14:8495206-8495357 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 7

Conread position: 171-310
Cow position: chr14:19633248-19633390 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 53, 25

Conread position: 177-301
Cow position: chr14:8784260-8784384 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 8

Show alignments to all cow chromosomes.