Cow genome map

Conread name: Ss1.1-Pig4-TMW8017F08.3

Conread position: 1-171
Cow position: chr16:21370052-21370220 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 30

Conread position: 1-303
Cow position: chr16:7550102-7549806 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 176, 27

Conread position: 1-310
Cow position: chr16:44743997-44744307 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 31

Conread position: 2-309
Cow position: chr16:424677-424979 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 54

Conread position: 4-233
Cow position: chr16:2417456-2417676 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 69

Conread position: 4-260
Cow position: chr16:34753827-34754079 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 220, 26

Conread position: 4-301
Cow position: chr16:5636717-5636429 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 238, 26

Conread position: 4-301
Cow position: chr16:13611320-13611612 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 29

Conread position: 4-303
Cow position: chr16:35758334-35758050 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 4-305
Cow position: chr16:3304158-3303868 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 27, 153

Conread position: 4-305
Cow position: chr16:49169246-49169549 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 16, 28

Conread position: 4-307
Cow position: chr16:35195481-35195770 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 252, 28

Conread position: 4-307
Cow position: chr16:39165371-39165078 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 131, 18

Conread position: 4-308
Cow position: chr16:7665770-7665468 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 65, 26

Conread position: 4-308
Cow position: chr16:24826206-24825907 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 220, 25

Conread position: 4-309
Cow position: chr16:8366694-8366988 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 32

Conread position: 4-309
Cow position: chr16:29608642-29608354 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 220, 25

Conread position: 4-310
Cow position: chr16:13698648-13698343 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 26

Conread position: 4-310
Cow position: chr16:16597687-16597397 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 4-310
Cow position: chr16:24702983-24702683 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 25

Conread position: 4-310
Cow position: chr16:32301873-32302161 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 97, 26

Conread position: 4-310
Cow position: chr16:43308430-43308734 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 26

Conread position: 5-209
Cow position: chr16:17134928-17135125 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 18

Conread position: 5-296
Cow position: chr16:50289282-50288994 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 145, 25

Conread position: 5-299
Cow position: chr16:33226407-33226696 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 219, 18

Conread position: 5-303
Cow position: chr16:33646146-33645852 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 201, 14

Conread position: 5-303
Cow position: chr16:49229639-49229934 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 147, 25

Conread position: 5-307
Cow position: chr16:28833975-28833673 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 24

Conread position: 5-310
Cow position: chr16:13306740-13307031 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 5-310
Cow position: chr16:39474023-39474306 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 218, 23

Conread position: 5-311
Cow position: chr16:45139795-45139502 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 219, 25

Conread position: 6-299
Cow position: chr16:14242502-14242214 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 81

Conread position: 6-310
Cow position: chr16:14106768-14106477 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 218, 24

Conread position: 6-310
Cow position: chr16:26649498-26649799 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 216, 26

Conread position: 6-310
Cow position: chr16:54579297-54579002 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 7-173
Cow position: chr16:33235032-33235195 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 93

Conread position: 7-177
Cow position: chr16:17291891-17292061 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 141

Conread position: 7-209
Cow position: chr16:31561887-31561688 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 25

Conread position: 7-222
Cow position: chr16:3114669-3114461 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 7-226
Cow position: chr16:29527958-29527743 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 176, 37

Conread position: 7-250
Cow position: chr16:45122165-45121930 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 217, 26

Conread position: 7-271
Cow position: chr16:8738200-8737935 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 60

Conread position: 7-293
Cow position: chr16:47964689-47964967 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 23

Conread position: 7-297
Cow position: chr16:7505214-7504932 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 163, 23

Conread position: 7-298
Cow position: chr16:48340563-48340852 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 11, 23

Conread position: 7-301
Cow position: chr16:4059485-4059197 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 23

Conread position: 7-301
Cow position: chr16:23681494-23681210 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 88

Conread position: 7-301
Cow position: chr16:48956929-48956635 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 135, 159

Conread position: 7-301
Cow position: chr16:52275002-52275290 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 216, 29

Conread position: 7-303
Cow position: chr16:820384-820089 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 23

Conread position: 7-303
Cow position: chr16:11615110-11615394 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 143

Conread position: 7-303
Cow position: chr16:31117485-31117782 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 217, 22

Conread position: 7-303
Cow position: chr16:33704936-33704645 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 173, 106

Conread position: 7-308
Cow position: chr16:15960160-15960458 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 181, 22

Conread position: 7-310
Cow position: chr16:238395-238097 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 13

Conread position: 7-310
Cow position: chr16:5364031-5363727 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 23

Conread position: 7-310
Cow position: chr16:13689796-13689499 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 223, 23

Conread position: 7-310
Cow position: chr16:14568358-14568650 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 62, 50

Conread position: 7-310
Cow position: chr16:20025570-20025278 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 223, 16

Conread position: 7-310
Cow position: chr16:20633745-20634047 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 127

Conread position: 7-310
Cow position: chr16:25170526-25170225 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 59

Conread position: 7-310
Cow position: chr16:25839750-25839450 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 22

Conread position: 7-310
Cow position: chr16:42078717-42079007 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 217, 92

Conread position: 7-310
Cow position: chr16:43105385-43105682 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 24

Conread position: 7-310
Cow position: chr16:45813569-45813870 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 200, 23

Conread position: 7-310
Cow position: chr16:48006363-48006656 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 221, 22

Conread position: 7-310
Cow position: chr16:48095636-48095930 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 225, 16

Conread position: 7-311
Cow position: chr16:11791142-11790847 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 93

Conread position: 8-222
Cow position: chr16:34220315-34220107 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 22

Conread position: 8-301
Cow position: chr16:17945652-17945362 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 139

Conread position: 8-309
Cow position: chr16:45610114-45609823 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 34, 21

Conread position: 8-310
Cow position: chr16:17627058-17626761 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 22

Conread position: 8-310
Cow position: chr16:37452485-37452787 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 216, 22

Conread position: 8-310
Cow position: chr16:39394700-39394411 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 10, 33

Conread position: 8-310
Cow position: chr16:40562360-40562062 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 216, 22

Conread position: 8-310
Cow position: chr16:42444286-42443987 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 45

Conread position: 8-310
Cow position: chr16:48369823-48370116 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 15, 29

Conread position: 9-279
Cow position: chr16:41578357-41578088 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 139

Conread position: 9-298
Cow position: chr16:33198311-33198591 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 167, 21

Conread position: 9-303
Cow position: chr16:25387103-25386819 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 24, 88

Conread position: 9-307
Cow position: chr16:38708707-38708997 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 117

Conread position: 9-307
Cow position: chr16:45678107-45677819 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 282, 146

Conread position: 9-309
Cow position: chr16:54679792-54679503 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 214, 23

Conread position: 9-310
Cow position: chr16:4910397-4910700 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 60, 23

Conread position: 9-310
Cow position: chr16:11105680-11105384 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 7

Conread position: 9-310
Cow position: chr16:11806800-11806507 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 40, 21

Conread position: 9-310
Cow position: chr16:11957447-11957753 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 154

Conread position: 9-310
Cow position: chr16:20205589-20205287 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 20

Conread position: 9-310
Cow position: chr16:52170183-52169897 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 165, 21

Conread position: 9-311
Cow position: chr16:23729789-23730105 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 20

Conread position: 11-209
Cow position: chr16:11134858-11135046 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 168, 21

Conread position: 11-222
Cow position: chr16:30305688-30305891 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 19

Conread position: 11-248
Cow position: chr16:17903519-17903756 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 213, 21

Conread position: 11-296
Cow position: chr16:32969955-32970233 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 19

Conread position: 11-298
Cow position: chr16:12320350-12320065 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 30, 137

Conread position: 11-303
Cow position: chr16:17745962-17745673 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 12

Conread position: 11-303
Cow position: chr16:42733885-42734175 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 21

Conread position: 11-310
Cow position: chr16:5257122-5256831 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 19

Conread position: 11-310
Cow position: chr16:9985267-9985555 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 11-310
Cow position: chr16:31348640-31348936 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 21

Conread position: 11-310
Cow position: chr16:46433198-46433492 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 145

Conread position: 11-310
Cow position: chr16:49126059-49126353 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 115

Conread position: 11-341
Cow position: chr16:7418503-7418187 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 213, 19

Conread position: 12-309
Cow position: chr16:42241993-42242283 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 212, 18

Conread position: 12-310
Cow position: chr16:31078966-31079265 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 184, 17

Conread position: 12-310
Cow position: chr16:32781491-32781197 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 89

Conread position: 12-310
Cow position: chr16:40333201-40333490 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 218, 17

Conread position: 12-316
Cow position: chr16:3634241-3633937 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 20

Conread position: 13-243
Cow position: chr16:21040154-21039926 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 159

Conread position: 13-279
Cow position: chr16:9905215-9904955 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 23

Conread position: 13-310
Cow position: chr16:52133394-52133684 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 210, 15

Conread position: 13-327
Cow position: chr16:18353832-18354138 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 102

Conread position: 14-301
Cow position: chr16:51501052-51500774 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 210, 15

Conread position: 14-310
Cow position: chr16:30036869-30037160 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 210, 9

Conread position: 14-310
Cow position: chr16:45554566-45554269 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 104, 16

Conread position: 14-310
Cow position: chr16:48385279-48385567 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 56

Conread position: 15-296
Cow position: chr16:48493303-48493024 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 208, 131

Conread position: 15-303
Cow position: chr16:17289072-17288779 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 142

Conread position: 15-305
Cow position: chr16:689826-689548 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 111, 0

Conread position: 15-309
Cow position: chr16:48494432-48494720 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 209, 17

Conread position: 15-310
Cow position: chr16:20069954-20069659 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 209, 14

Conread position: 16-287
Cow position: chr16:13195217-13195487 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 183
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 64

Conread position: 16-309
Cow position: chr16:30715628-30715328 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 186

Conread position: 16-314
Cow position: chr16:27723345-27723042 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 133, 14

Conread position: 18-299
Cow position: chr16:3246086-3246364 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 45, 12

Conread position: 19-259
Cow position: chr16:22207195-22206958 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 11

Conread position: 19-301
Cow position: chr16:15824326-15824604 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 11

Conread position: 19-301
Cow position: chr16:42340314-42340035 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 11

Conread position: 19-303
Cow position: chr16:53086223-53086491 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 19-310
Cow position: chr16:9973381-9973667 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 11

Conread position: 20-310
Cow position: chr16:4626273-4626560 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 156, 130

Conread position: 22-310
Cow position: chr16:6344326-6344604 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 217, 72

Conread position: 23-303
Cow position: chr16:43505696-43505960 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 23-307
Cow position: chr16:42345500-42345769 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 23-310
Cow position: chr16:36203504-36203779 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 92, 32

Conread position: 24-301
Cow position: chr16:37669623-37669896 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 200, 129

Conread position: 24-307
Cow position: chr16:23738294-23738013 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 200, 11

Conread position: 29-303
Cow position: chr16:53627319-53627589 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 201, 121

Conread position: 29-310
Cow position: chr16:50873061-50873333 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 31, 16

Conread position: 30-301
Cow position: chr16:48398146-48398412 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 250, 124

Conread position: 32-302
Cow position: chr16:14125242-14124993 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 24

Conread position: 32-310
Cow position: chr16:27659640-27659902 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 119

Conread position: 32-310
Cow position: chr16:41696986-41697256 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 192, 123

Conread position: 39-300
Cow position: chr16:52834789-52835041 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 113

Conread position: 39-309
Cow position: chr16:570821-571081 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 185, 71

Conread position: 52-302
Cow position: chr16:12060502-12060256 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 121, 103

Conread position: 52-310
Cow position: chr16:10352968-10352702 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 126, 149

Conread position: 52-310
Cow position: chr16:39513990-39514244 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 39

Conread position: 62-310
Cow position: chr16:29557555-29557796 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 160, 40

Conread position: 62-310
Cow position: chr16:32327734-32327483 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 117, 136

Conread position: 64-310
Cow position: chr16:8322908-8323151 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 160, 86

Conread position: 65-299
Cow position: chr16:8239789-8240023 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 99

Conread position: 67-301
Cow position: chr16:47643485-47643257 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 156, 78

Conread position: 67-310
Cow position: chr16:11008416-11008176 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 83

Conread position: 67-310
Cow position: chr16:31122179-31122414 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 67-311
Cow position: chr16:50417626-50417853 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 68-301
Cow position: chr16:39646615-39646390 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 178, 78

Conread position: 68-305
Cow position: chr16:52889341-52889572 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 162, 17

Conread position: 68-309
Cow position: chr16:4192364-4192587 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 186, 42

Conread position: 68-309
Cow position: chr16:13752062-13752292 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 162, 78

Conread position: 68-310
Cow position: chr16:8279722-8279954 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 68-310
Cow position: chr16:33508142-33507898 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 88, 50

Conread position: 68-310
Cow position: chr16:41752507-41752742 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 218, 31

Conread position: 68-310
Cow position: chr16:50521547-50521309 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 78

Conread position: 69-307
Cow position: chr16:52790123-52789891 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 234, 9

Conread position: 69-310
Cow position: chr16:56231896-56231658 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 106, 77

Conread position: 71-299
Cow position: chr16:54084103-54083877 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 152, 98

Conread position: 71-303
Cow position: chr16:37380337-37380105 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 149, 75

Conread position: 71-308
Cow position: chr16:31269207-31268974 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 153, 89

Conread position: 71-309
Cow position: chr16:11102754-11102992 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 151, 91

Conread position: 71-310
Cow position: chr16:4902655-4902420 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 154, 92

Conread position: 71-310
Cow position: chr16:16552628-16552393 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 70, 87

Conread position: 71-310
Cow position: chr16:24672291-24672526 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 132, 25

Conread position: 71-310
Cow position: chr16:51710070-51710297 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 140, 44

Conread position: 72-310
Cow position: chr16:10592497-10592266 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 152, 28

Conread position: 73-302
Cow position: chr16:10148347-10148116 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 73

Conread position: 74-308
Cow position: chr16:10650824-10651057 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 84

Conread position: 74-310
Cow position: chr16:22123906-22124122 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 77-307
Cow position: chr16:41590838-41590609 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 147, 117

Conread position: 79-310
Cow position: chr16:39238005-39237778 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 145, 71

Conread position: 84-310
Cow position: chr16:21905216-21904997 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 45

Conread position: 84-310
Cow position: chr16:42778018-42777798 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 150, 66

Conread position: 96-310
Cow position: chr16:49404117-49404320 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 0

Conread position: 97-310
Cow position: chr16:35168771-35168560 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 121, 58

Conread position: 106-310
Cow position: chr16:24148193-24147989 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 49

Conread position: 120-301
Cow position: chr16:23033869-23033698 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 171, 40

Conread position: 125-310
Cow position: chr16:11568105-11568283 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 30

Conread position: 126-388
Cow position: chr16:16177830-16177572 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 38

Conread position: 159-300
Cow position: chr16:54598236-54598099 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 5

Conread position: 159-310
Cow position: chr16:28192054-28191902 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 6

Conread position: 167-310
Cow position: chr16:16544048-16543906 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 31

Conread position: 167-310
Cow position: chr16:45676874-45677021 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 30

Conread position: 175-303
Cow position: chr16:53037655-53037785 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 10

Show alignments to all cow chromosomes.