Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8017F08.3 |
| Conread position: | 2-310 |
| Cow position: | chr17:22564359-22564053 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 109, 28 |
| Conread position: | 4-209 |
| Cow position: | chr17:32332919-32333115 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 4-283 |
| Cow position: | chr17:14652606-14652881 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 4-297 |
| Cow position: | chr17:24559463-24559178 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 4-300 |
| Cow position: | chr17:30665442-30665152 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 4-301 |
| Cow position: | chr17:4225330-4225612 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 213, 52 |
| Conread position: | 4-301 |
| Cow position: | chr17:17059596-17059314 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 4-301 |
| Cow position: | chr17:29157589-29157298 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 232, 28 |
| Conread position: | 4-301 |
| Cow position: | chr17:35126878-35126589 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 183, 61 |
| Conread position: | 4-303 |
| Cow position: | chr17:23063892-23063591 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 4-303 |
| Cow position: | chr17:24824419-24824131 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 4-308 |
| Cow position: | chr17:25901378-25901072 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 175 |
| Conread position: | 4-308 |
| Cow position: | chr17:40288828-40289124 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 220, 29 |
| Conread position: | 4-310 |
| Cow position: | chr17:7810581-7810862 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 4-310 |
| Cow position: | chr17:9117815-9117519 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 4-310 |
| Cow position: | chr17:9854148-9853862 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 235, 28 |
| Conread position: | 4-310 |
| Cow position: | chr17:11618757-11618456 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 48 |
| Conread position: | 4-310 |
| Cow position: | chr17:24149357-24149053 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 58 |
| Conread position: | 4-310 |
| Cow position: | chr17:24822034-24821738 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 109, 26 |
| Conread position: | 4-310 |
| Cow position: | chr17:32366466-32366160 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 4-310 |
| Cow position: | chr17:38615133-38614828 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 4-311 |
| Cow position: | chr17:26233657-26233955 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 4-313 |
| Cow position: | chr17:27183771-27184071 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 207, 25 |
| Conread position: | 5-209 |
| Cow position: | chr17:40276912-40276706 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 169, 27 |
| Conread position: | 5-221 |
| Cow position: | chr17:25800711-25800917 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 107, 24 |
| Conread position: | 5-286 |
| Cow position: | chr17:18495348-18495624 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 219, 25 |
| Conread position: | 5-299 |
| Cow position: | chr17:28284861-28285147 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 210, 53 |
| Conread position: | 5-301 |
| Cow position: | chr17:3467924-3467648 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-303 |
| Cow position: | chr17:20157779-20157490 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 5-303 |
| Cow position: | chr17:24883399-24883687 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 225, 24 |
| Conread position: | 5-310 |
| Cow position: | chr17:908912-908618 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 219, 25 |
| Conread position: | 5-310 |
| Cow position: | chr17:15102720-15103012 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 5-310 |
| Cow position: | chr17:16371431-16371127 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 5-310 |
| Cow position: | chr17:18108915-18109214 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 219, 40 |
| Conread position: | 5-310 |
| Cow position: | chr17:30728677-30728393 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 5-310 |
| Cow position: | chr17:31037205-31037508 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 219, 25 |
| Conread position: | 6-228 |
| Cow position: | chr17:5372358-5372571 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-245 |
| Cow position: | chr17:34790891-34791129 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 6-309 |
| Cow position: | chr17:25097623-25097336 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 224, 13 |
| Conread position: | 7-209 |
| Cow position: | chr17:26575051-26575254 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 154 |
| Conread position: | 7-229 |
| Cow position: | chr17:21039727-21039520 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 7-233 |
| Cow position: | chr17:22016919-22017133 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 7-250 |
| Cow position: | chr17:9824838-9824601 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 216, 25 |
| Conread position: | 7-284 |
| Cow position: | chr17:21325502-21325231 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 7-286 |
| Cow position: | chr17:15340582-15340856 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 7-295 |
| Cow position: | chr17:11215061-11215342 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 217, 97 |
| Conread position: | 7-301 |
| Cow position: | chr17:1634320-1634606 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 7-301 |
| Cow position: | chr17:32989648-32989366 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 7-302 |
| Cow position: | chr17:33933576-33933863 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 7-303 |
| Cow position: | chr17:20884693-20884402 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 7-303 |
| Cow position: | chr17:30529377-30529662 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 7-304 |
| Cow position: | chr17:11215724-11216013 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 24 |
| Conread position: | 7-309 |
| Cow position: | chr17:20032741-20033039 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 29 |
| Conread position: | 7-309 |
| Cow position: | chr17:32993452-32993742 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 7-310 |
| Cow position: | chr17:4105826-4106114 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 7-310 |
| Cow position: | chr17:4121561-4121850 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 7-310 |
| Cow position: | chr17:6318697-6318985 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 7-310 |
| Cow position: | chr17:6329285-6328984 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 215, 45 |
| Conread position: | 7-310 |
| Cow position: | chr17:9911927-9911637 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 221, 23 |
| Conread position: | 7-310 |
| Cow position: | chr17:11664412-11664716 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 7-310 |
| Cow position: | chr17:14033472-14033768 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 7-310 |
| Cow position: | chr17:16446265-16446560 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 7-310 |
| Cow position: | chr17:17406303-17406014 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 7-310 |
| Cow position: | chr17:20022341-20022645 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 34, 141 |
| Conread position: | 7-310 |
| Cow position: | chr17:20992873-20993168 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 164, 21 |
| Conread position: | 7-310 |
| Cow position: | chr17:24587794-24587494 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 7-310 |
| Cow position: | chr17:24786852-24787145 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 7-310 |
| Cow position: | chr17:40331934-40331637 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 207, 23 |
| Conread position: | 7-314 |
| Cow position: | chr17:32138255-32138546 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 227, 21 |
| Conread position: | 7-327 |
| Cow position: | chr17:32273515-32273829 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 18, 147 |
| Conread position: | 7-338 |
| Cow position: | chr17:17410463-17410137 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 8-209 |
| Cow position: | chr17:12959275-12959082 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 8-280 |
| Cow position: | chr17:25513952-25514221 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 139 |
| Conread position: | 8-281 |
| Cow position: | chr17:11912333-11912596 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 8-291 |
| Cow position: | chr17:11831944-11832228 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 8-297 |
| Cow position: | chr17:25612259-25611972 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 169, 22 |
| Conread position: | 8-301 |
| Cow position: | chr17:32349237-32348955 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 8-303 |
| Cow position: | chr17:28468289-28468015 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 8-310 |
| Cow position: | chr17:1060876-1061187 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 57, 125 |
| Conread position: | 8-310 |
| Cow position: | chr17:1410068-1410367 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 8-310 |
| Cow position: | chr17:5768073-5767786 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 273, 21 |
| Conread position: | 8-310 |
| Cow position: | chr17:29715036-29715314 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 9-153 |
| Cow position: | chr17:18109380-18109524 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-186 |
| Cow position: | chr17:43315119-43315295 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 9-194 |
| Cow position: | chr17:37340862-37341050 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 167 |
| Conread position: | 9-209 |
| Cow position: | chr17:29995266-29995461 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 162 |
| Conread position: | 9-297 |
| Cow position: | chr17:24004541-24004268 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 9-310 |
| Cow position: | chr17:21114786-21115078 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 167, 21 |
| Conread position: | 11-277 |
| Cow position: | chr17:23516777-23517037 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 11-302 |
| Cow position: | chr17:265836-265557 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 45 |
| Conread position: | 11-303 |
| Cow position: | chr17:33793329-33793057 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 166, 19 |
| Conread position: | 11-309 |
| Cow position: | chr17:13922655-13922352 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 11-309 |
| Cow position: | chr17:14003991-14003694 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 11-309 |
| Cow position: | chr17:27429731-27429455 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 11-310 |
| Cow position: | chr17:6423927-6423633 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 206, 21 |
| Conread position: | 11-310 |
| Cow position: | chr17:18592609-18592316 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 11-310 |
| Cow position: | chr17:24554161-24553880 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 213, 29 |
| Conread position: | 12-281 |
| Cow position: | chr17:5900534-5900268 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 161, 18 |
| Conread position: | 12-305 |
| Cow position: | chr17:36330794-36331088 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 212, 18 |
| Conread position: | 12-307 |
| Cow position: | chr17:5422904-5423194 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 18 |
| Conread position: | 12-310 |
| Cow position: | chr17:9697515-9697826 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 12-310 |
| Cow position: | chr17:21003665-21003955 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 168, 20 |
| Conread position: | 12-310 |
| Cow position: | chr17:27048320-27048031 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 229, 18 |
| Conread position: | 12-310 |
| Cow position: | chr17:32418951-32419242 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 13-310 |
| Cow position: | chr17:3577701-3577414 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 13-310 |
| Cow position: | chr17:20932495-20932201 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 211, 17 |
| Conread position: | 13-310 |
| Cow position: | chr17:32471617-32471918 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 209, 16 |
| Conread position: | 14-290 |
| Cow position: | chr17:40852135-40851875 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 14-303 |
| Cow position: | chr17:12536300-12536589 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 8, 152 |
| Conread position: | 14-310 |
| Cow position: | chr17:33288494-33288782 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 158, 15 |
| Conread position: | 15-306 |
| Cow position: | chr17:33657907-33658190 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 207, 15 |
| Conread position: | 15-310 |
| Cow position: | chr17:41891899-41892192 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 209, 37 |
| Conread position: | 16-303 |
| Cow position: | chr17:20990029-20990315 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 16-307 |
| Cow position: | chr17:39736337-39736056 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 6, 105 |
| Conread position: | 16-310 |
| Cow position: | chr17:26765184-26764889 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 16-310 |
| Cow position: | chr17:30713503-30713221 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 202, 22 |
| Conread position: | 18-310 |
| Cow position: | chr17:24580136-24580424 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 206, 12 |
| Conread position: | 20-309 |
| Cow position: | chr17:12591332-12591040 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 148 |
| Conread position: | 25-296 |
| Cow position: | chr17:10458779-10459051 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 99, 129 |
| Conread position: | 29-299 |
| Cow position: | chr17:1040893-1040629 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 195, 23 |
| Conread position: | 29-301 |
| Cow position: | chr17:5000439-5000697 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 201, 97 |
| Conread position: | 38-303 |
| Cow position: | chr17:3503721-3503461 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 186, 84 |
| Conread position: | 39-252 |
| Cow position: | chr17:11368711-11368920 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 185, 39 |
| Conread position: | 39-309 |
| Cow position: | chr17:21243651-21243910 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 139, 56 |
| Conread position: | 49-309 |
| Cow position: | chr17:4299802-4300045 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 59-303 |
| Cow position: | chr17:28540147-28539908 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 165, 36 |
| Conread position: | 62-310 |
| Cow position: | chr17:11172499-11172744 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 138, 100 |
| Conread position: | 62-310 |
| Cow position: | chr17:31231007-31231239 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 173, 30 |
| Conread position: | 64-310 |
| Cow position: | chr17:1275637-1275396 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 160, 32 |
| Conread position: | 64-310 |
| Cow position: | chr17:14762008-14762247 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 67-303 |
| Cow position: | chr17:3782154-3781924 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 29 |
| Conread position: | 67-310 |
| Cow position: | chr17:5006379-5006615 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 163, 43 |
| Conread position: | 67-310 |
| Cow position: | chr17:8836837-8837077 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 155, 36 |
| Conread position: | 67-310 |
| Cow position: | chr17:21738763-21739008 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 156, 92 |
| Conread position: | 67-310 |
| Cow position: | chr17:25541706-25541941 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 67-311 |
| Cow position: | chr17:26818347-26818578 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 68-297 |
| Cow position: | chr17:38647171-38646945 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 149, 111 |
| Conread position: | 68-310 |
| Cow position: | chr17:923989-923750 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 164, 80 |
| Conread position: | 68-310 |
| Cow position: | chr17:7132329-7132579 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 132 |
| Conread position: | 68-310 |
| Cow position: | chr17:34596050-34595815 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 162, 78 |
| Conread position: | 69-310 |
| Cow position: | chr17:4968221-4967986 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 155, 86 |
| Conread position: | 69-310 |
| Cow position: | chr17:12447283-12447528 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 70-310 |
| Cow position: | chr17:18860613-18860847 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 154, 76 |
| Conread position: | 71-310 |
| Cow position: | chr17:1256393-1256628 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 82 |
| Conread position: | 71-310 |
| Cow position: | chr17:21335585-21335822 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 154, 82 |
| Conread position: | 71-310 |
| Cow position: | chr17:24490648-24490397 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 129 |
| Conread position: | 71-310 |
| Cow position: | chr17:25815711-25815476 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 84-308 |
| Cow position: | chr17:4601451-4601670 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 90-311 |
| Cow position: | chr17:15333622-15333836 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 134, 70 |
| Conread position: | 91-310 |
| Cow position: | chr17:12059006-12059219 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 139, 30 |
| Conread position: | 100-285 |
| Cow position: | chr17:32009362-32009540 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 100-303 |
| Cow position: | chr17:41289944-41290141 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 118, 60 |
| Conread position: | 107-310 |
| Cow position: | chr17:10510586-10510786 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 39 |
| Conread position: | 117-310 |
| Cow position: | chr17:34207754-34207944 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 43 |
| Conread position: | 162-310 |
| Cow position: | chr17:21207109-21207259 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 164-310 |
| Cow position: | chr17:4436211-4436359 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 166-310 |
| Cow position: | chr17:12216051-12216201 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 174-310 |
| Cow position: | chr17:3306878-3306739 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 310-421 |
| Cow position: | chr17:5998838-5998944 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.