Cow genome map

Conread name: Ss1.1-Pig4-TMW8017F08.3

Conread position: 1-310
Cow position: chr20:3141751-3141457 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 37

Conread position: 2-310
Cow position: chr20:5814743-5814448 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 260, 30

Conread position: 2-310
Cow position: chr20:41089618-41089916 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 30

Conread position: 4-254
Cow position: chr20:38090088-38089842 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 220, 28

Conread position: 4-297
Cow position: chr20:29845227-29844936 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 28

Conread position: 4-303
Cow position: chr20:10200521-10200228 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 28

Conread position: 4-303
Cow position: chr20:14433248-14433547 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 26

Conread position: 4-308
Cow position: chr20:6890885-6890592 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 40

Conread position: 4-310
Cow position: chr20:5636657-5636358 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 27

Conread position: 4-310
Cow position: chr20:5827115-5826815 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 220, 26

Conread position: 4-310
Cow position: chr20:17251893-17251585 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 27

Conread position: 4-310
Cow position: chr20:22978502-22978196 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 172, 26

Conread position: 4-310
Cow position: chr20:23064660-23064955 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 213, 26

Conread position: 4-310
Cow position: chr20:23870644-23870938 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 4-310
Cow position: chr20:26996706-26996408 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 55

Conread position: 4-310
Cow position: chr20:30710462-30710772 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 206, 25

Conread position: 4-310
Cow position: chr20:39398656-39398365 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 220, 26

Conread position: 5-233
Cow position: chr20:38514952-38514738 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 25

Conread position: 5-310
Cow position: chr20:9412663-9412366 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 26

Conread position: 5-310
Cow position: chr20:12420444-12420743 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 219, 77

Conread position: 6-310
Cow position: chr20:15548713-15549024 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 35

Conread position: 7-181
Cow position: chr20:15530032-15529859 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 161, 23

Conread position: 7-206
Cow position: chr20:5702896-5702704 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 23

Conread position: 7-281
Cow position: chr20:7738059-7738323 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 216, 23

Conread position: 7-299
Cow position: chr20:28982873-28982584 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 217, 87

Conread position: 7-301
Cow position: chr20:5998490-5998783 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 160

Conread position: 7-301
Cow position: chr20:8547239-8546949 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 15, 24

Conread position: 7-301
Cow position: chr20:11550541-11550248 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 94

Conread position: 7-305
Cow position: chr20:7363135-7362848 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 23

Conread position: 7-306
Cow position: chr20:6054337-6054640 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 23

Conread position: 7-308
Cow position: chr20:8578426-8578124 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 55

Conread position: 7-309
Cow position: chr20:14879961-14879665 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 23

Conread position: 7-310
Cow position: chr20:3255209-3254927 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 23

Conread position: 7-310
Cow position: chr20:12239511-12239802 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 134, 23

Conread position: 7-310
Cow position: chr20:12581781-12582074 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 10, 23

Conread position: 7-310
Cow position: chr20:14980332-14980637 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 25

Conread position: 7-310
Cow position: chr20:21929077-21928778 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 217, 22

Conread position: 7-310
Cow position: chr20:23846490-23846794 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 9, 25

Conread position: 7-310
Cow position: chr20:28605381-28605083 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 199, 22

Conread position: 7-310
Cow position: chr20:32847517-32847231 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 7-311
Cow position: chr20:34097781-34098085 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 23

Conread position: 8-303
Cow position: chr20:20203388-20203097 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 29

Conread position: 8-303
Cow position: chr20:22485032-22484741 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 114

Conread position: 8-310
Cow position: chr20:13269788-13269501 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 77

Conread position: 8-310
Cow position: chr20:38578593-38578883 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 152, 22

Conread position: 9-284
Cow position: chr20:18379548-18379282 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 149, 20

Conread position: 9-303
Cow position: chr20:32463354-32463640 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 215, 21

Conread position: 9-310
Cow position: chr20:6240349-6240647 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 23

Conread position: 9-310
Cow position: chr20:22065232-22064948 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 212, 14

Conread position: 9-310
Cow position: chr20:27407723-27408000 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 212, 20

Conread position: 10-299
Cow position: chr20:38818165-38817891 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 214, 21

Conread position: 10-310
Cow position: chr20:34251503-34251809 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 203
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 19

Conread position: 11-272
Cow position: chr20:32866028-32866275 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 213, 19

Conread position: 11-301
Cow position: chr20:24069974-24069687 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 213, 31

Conread position: 11-301
Cow position: chr20:34777350-34777067 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 135

Conread position: 11-310
Cow position: chr20:7426029-7426311 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 11-310
Cow position: chr20:8556101-8556396 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 19

Conread position: 11-310
Cow position: chr20:25009464-25009765 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 158, 17

Conread position: 12-299
Cow position: chr20:13025443-13025725 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 83, 18

Conread position: 12-303
Cow position: chr20:6603207-6602921 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 212, 11

Conread position: 12-310
Cow position: chr20:3599231-3599516 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 18

Conread position: 12-310
Cow position: chr20:7438681-7438978 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 7, 137

Conread position: 12-321
Cow position: chr20:11542114-11542416 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 129

Conread position: 13-301
Cow position: chr20:14807050-14806767 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 23

Conread position: 13-310
Cow position: chr20:398141-398428 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 230, 17

Conread position: 14-297
Cow position: chr20:38768298-38768570 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 210, 9

Conread position: 14-301
Cow position: chr20:31740054-31740337 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 36

Conread position: 14-310
Cow position: chr20:10208973-10208680 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 103, 16

Conread position: 14-310
Cow position: chr20:19363198-19363490 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 159, 9

Conread position: 15-303
Cow position: chr20:1576263-1575980 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 118

Conread position: 19-303
Cow position: chr20:19459505-19459775 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 19-310
Cow position: chr20:28067264-28067552 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 190, 11

Conread position: 19-310
Cow position: chr20:36207974-36207680 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 138, 11

Conread position: 20-309
Cow position: chr20:18320634-18320916 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 160, 79

Conread position: 29-310
Cow position: chr20:22235463-22235189 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 40, 29

Conread position: 32-310
Cow position: chr20:23792752-23792485 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 192, 118

Conread position: 33-310
Cow position: chr20:39743457-39743193 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 127, 0

Conread position: 39-280
Cow position: chr20:22265111-22265341 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 184, 93

Conread position: 39-296
Cow position: chr20:39266817-39267071 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 141, 74

Conread position: 39-310
Cow position: chr20:25161984-25162254 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 117

Conread position: 39-310
Cow position: chr20:28441468-28441204 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 185, 116

Conread position: 58-310
Cow position: chr20:9433709-9433462 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 166, 88

Conread position: 62-309
Cow position: chr20:3606843-3607079 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 67-281
Cow position: chr20:35710287-35710075 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 156, 87

Conread position: 67-303
Cow position: chr20:33363631-33363399 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 162, 100

Conread position: 67-309
Cow position: chr20:8308130-8307892 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 159, 32

Conread position: 67-310
Cow position: chr20:4206085-4205841 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 157, 79

Conread position: 67-310
Cow position: chr20:6257945-6258186 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 91

Conread position: 67-310
Cow position: chr20:32083969-32084207 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 157, 36

Conread position: 69-310
Cow position: chr20:8702806-8703034 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 69-310
Cow position: chr20:22313049-22313284 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 124, 115

Conread position: 69-310
Cow position: chr20:39518118-39517881 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 148, 86

Conread position: 71-310
Cow position: chr20:7211148-7210914 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 159, 7

Conread position: 77-310
Cow position: chr20:23505931-23505706 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 147, 83

Conread position: 100-301
Cow position: chr20:13967176-13967377 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 130, 60

Conread position: 100-310
Cow position: chr20:22704375-22704166 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 60

Conread position: 109-310
Cow position: chr20:18837079-18837283 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 115, 55

Conread position: 118-299
Cow position: chr20:18618698-18618521 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 27

Conread position: 123-303
Cow position: chr20:15593355-15593177 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 32

Conread position: 155-310
Cow position: chr20:22445604-22445761 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 42

Show alignments to all cow chromosomes.