Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8017F08.3 |
| Conread position: | 2-310 |
| Cow position: | chr26:23315923-23315618 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 26 |
| Conread position: | 4-249 |
| Cow position: | chr26:677831-678070 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 207, 25 |
| Conread position: | 4-265 |
| Cow position: | chr26:24240830-24240569 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 4-301 |
| Cow position: | chr26:19446281-19445984 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 26 |
| Conread position: | 4-308 |
| Cow position: | chr26:10764360-10764073 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 4-310 |
| Cow position: | chr26:8811276-8810980 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 4-310 |
| Cow position: | chr26:13020996-13021297 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 25 |
| Conread position: | 4-310 |
| Cow position: | chr26:16550137-16549832 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 4-310 |
| Cow position: | chr26:23582795-23583098 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 231, 151 |
| Conread position: | 5-248 |
| Cow position: | chr26:7687096-7687330 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 219, 141 |
| Conread position: | 5-304 |
| Cow position: | chr26:20769999-20769709 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 25 |
| Conread position: | 7-153 |
| Cow position: | chr26:33242035-33241890 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 7-286 |
| Cow position: | chr26:18825137-18825409 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 131, 23 |
| Conread position: | 7-300 |
| Cow position: | chr26:9535662-9535376 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 218, 23 |
| Conread position: | 7-301 |
| Cow position: | chr26:12964551-12964839 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 22 |
| Conread position: | 7-301 |
| Cow position: | chr26:33736407-33736693 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 7-308 |
| Cow position: | chr26:25526395-25526100 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 7-308 |
| Cow position: | chr26:31605552-31605256 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 7-309 |
| Cow position: | chr26:829951-829661 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 7-309 |
| Cow position: | chr26:19774154-19774451 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 146, 21 |
| Conread position: | 7-310 |
| Cow position: | chr26:8699898-8700198 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 141 |
| Conread position: | 7-310 |
| Cow position: | chr26:9492067-9491774 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 217, 14 |
| Conread position: | 7-310 |
| Cow position: | chr26:13802257-13801963 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 7-310 |
| Cow position: | chr26:14175427-14175128 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 208, 31 |
| Conread position: | 7-310 |
| Cow position: | chr26:20291546-20291834 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-310 |
| Cow position: | chr26:22892299-22892596 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 7-310 |
| Cow position: | chr26:26887991-26888282 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 22 |
| Conread position: | 7-310 |
| Cow position: | chr26:27491355-27491653 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 7-310 |
| Cow position: | chr26:32897731-32898023 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 217, 23 |
| Conread position: | 7-310 |
| Cow position: | chr26:33112237-33112534 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 7-310 |
| Cow position: | chr26:35704530-35704238 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 210, 23 |
| Conread position: | 8-305 |
| Cow position: | chr26:26950311-26950591 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 8-305 |
| Cow position: | chr26:28251302-28251000 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 8-310 |
| Cow position: | chr26:8353114-8352810 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 209, 24 |
| Conread position: | 8-310 |
| Cow position: | chr26:16783974-16783672 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 9-242 |
| Cow position: | chr26:23924996-23924764 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 9-265 |
| Cow position: | chr26:34724730-34724982 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 164, 89 |
| Conread position: | 9-310 |
| Cow position: | chr26:8307382-8307663 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 24, 147 |
| Conread position: | 10-310 |
| Cow position: | chr26:6252999-6252699 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 11-193 |
| Cow position: | chr26:7314765-7314586 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 11-290 |
| Cow position: | chr26:19110326-19110053 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 206, 24 |
| Conread position: | 11-310 |
| Cow position: | chr26:17148842-17148552 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 195, 19 |
| Conread position: | 11-310 |
| Cow position: | chr26:22354556-22354261 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 11-321 |
| Cow position: | chr26:14951001-14951306 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 12-203 |
| Cow position: | chr26:19636435-19636249 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 12-286 |
| Cow position: | chr26:22152368-22152097 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 210, 18 |
| Conread position: | 12-303 |
| Cow position: | chr26:35449204-35448916 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 12-310 |
| Cow position: | chr26:33201929-33202207 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 12-327 |
| Cow position: | chr26:9604703-9604392 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 14-301 |
| Cow position: | chr26:12144979-12145262 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 208, 16 |
| Conread position: | 20-310 |
| Cow position: | chr26:33566911-33567195 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 204, 10 |
| Conread position: | 25-310 |
| Cow position: | chr26:34847873-34847590 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 152, 129 |
| Conread position: | 45-310 |
| Cow position: | chr26:32955521-32955776 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 104 |
| Conread position: | 56-274 |
| Cow position: | chr26:18651538-18651750 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 62-308 |
| Cow position: | chr26:25394131-25393881 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 61, 109 |
| Conread position: | 67-310 |
| Cow position: | chr26:21636950-21637184 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 67-310 |
| Cow position: | chr26:32652647-32652878 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 185, 86 |
| Conread position: | 69-310 |
| Cow position: | chr26:22249392-22249630 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 155, 81 |
| Conread position: | 92-303 |
| Cow position: | chr26:32013694-32013482 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 132, 5 |
| Conread position: | 92-310 |
| Cow position: | chr26:5307205-5306984 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 100-310 |
| Cow position: | chr26:32035388-32035587 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 108-310 |
| Cow position: | chr26:13705951-13706156 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 118-300 |
| Cow position: | chr26:31572282-31572110 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 120-310 |
| Cow position: | chr26:6447563-6447755 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 104, 30 |
| Conread position: | 128-310 |
| Cow position: | chr26:24280850-24280677 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 132-310 |
| Cow position: | chr26:7525451-7525620 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.