Cow genome map

Conread name: Ss1.1-Pig4-TMW8017F08.3

Conread position: 2-310
Cow position: chr27:19387842-19388139 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 222, 21

Conread position: 4-152
Cow position: chr27:19576499-19576352 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 4-295
Cow position: chr27:27694944-27694662 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 220, 25

Conread position: 4-303
Cow position: chr27:27136696-27136401 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 185, 38

Conread position: 4-303
Cow position: chr27:27389200-27388906 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 113, 144

Conread position: 4-303
Cow position: chr27:28271326-28271028 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 220, 26

Conread position: 4-310
Cow position: chr27:8168606-8168304 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 55, 25

Conread position: 4-310
Cow position: chr27:10979687-10979985 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 198
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 220, 64

Conread position: 4-310
Cow position: chr27:14670559-14670259 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 207, 150

Conread position: 4-310
Cow position: chr27:16786656-16786948 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 256, 5

Conread position: 4-310
Cow position: chr27:26999597-26999294 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 12, 40

Conread position: 5-165
Cow position: chr27:7343603-7343444 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 25

Conread position: 5-291
Cow position: chr27:23594147-23594422 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 25

Conread position: 5-301
Cow position: chr27:1768796-1768511 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 219, 9

Conread position: 5-303
Cow position: chr27:16103637-16103922 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 219, 25

Conread position: 5-303
Cow position: chr27:21669287-21669006 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 5-303
Cow position: chr27:23483049-23483342 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 96

Conread position: 5-308
Cow position: chr27:22220376-22220673 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 143

Conread position: 6-309
Cow position: chr27:13875562-13875855 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 218, 24

Conread position: 7-204
Cow position: chr27:19508840-19509030 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 168, 23

Conread position: 7-211
Cow position: chr27:24305265-24305460 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 7-222
Cow position: chr27:23560205-23559997 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 147, 0

Conread position: 7-233
Cow position: chr27:23452289-23452502 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 182, 22

Conread position: 7-279
Cow position: chr27:23510809-23511084 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 52, 83

Conread position: 7-297
Cow position: chr27:26226464-26226178 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 27

Conread position: 7-298
Cow position: chr27:23890759-23891052 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 28, 157

Conread position: 7-301
Cow position: chr27:19685888-19685596 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 164

Conread position: 7-302
Cow position: chr27:20795620-20795904 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 7-309
Cow position: chr27:426794-427093 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 18, 53

Conread position: 7-309
Cow position: chr27:7649756-7649464 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 56

Conread position: 7-310
Cow position: chr27:7212884-7212591 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 217, 28

Conread position: 7-310
Cow position: chr27:15668950-15668645 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 145

Conread position: 7-310
Cow position: chr27:19717742-19718045 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 139, 25

Conread position: 7-310
Cow position: chr27:20828883-20828581 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 226, 38

Conread position: 7-310
Cow position: chr27:22418940-22418643 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 175, 113

Conread position: 7-310
Cow position: chr27:27245528-27245229 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 26

Conread position: 7-310
Cow position: chr27:28206628-28206919 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 174, 106

Conread position: 7-310
Cow position: chr27:28931978-28931666 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 54

Conread position: 7-311
Cow position: chr27:27632771-27632487 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 8-215
Cow position: chr27:23108075-23107875 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 109

Conread position: 8-303
Cow position: chr27:30872228-30871941 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 22

Conread position: 8-309
Cow position: chr27:27460745-27460451 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 71

Conread position: 8-310
Cow position: chr27:17397626-17397325 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 22

Conread position: 8-327
Cow position: chr27:16705079-16705389 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 205
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 243, 22

Conread position: 9-165
Cow position: chr27:15003151-15002994 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 9-310
Cow position: chr27:26238852-26239150 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 45

Conread position: 9-310
Cow position: chr27:26959786-26959493 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 64, 20

Conread position: 10-308
Cow position: chr27:4672842-4673140 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 19

Conread position: 10-310
Cow position: chr27:11480806-11480504 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 19

Conread position: 11-310
Cow position: chr27:27641179-27640870 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 19

Conread position: 12-310
Cow position: chr27:15454043-15454333 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 12-310
Cow position: chr27:20553563-20553842 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 19

Conread position: 12-310
Cow position: chr27:22035548-22035252 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 145

Conread position: 13-301
Cow position: chr27:20068142-20067862 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 211, 91

Conread position: 13-301
Cow position: chr27:25411675-25411401 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 211, 16

Conread position: 13-310
Cow position: chr27:299547-299262 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 183, 27

Conread position: 14-307
Cow position: chr27:15409202-15408921 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 166, 15

Conread position: 14-308
Cow position: chr27:16284310-16284592 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 161, 16

Conread position: 14-310
Cow position: chr27:16478504-16478216 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 87

Conread position: 14-310
Cow position: chr27:17331337-17331624 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 210, 16

Conread position: 15-310
Cow position: chr27:22171135-22171425 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 209, 15

Conread position: 19-297
Cow position: chr27:26413415-26413141 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 203, 13

Conread position: 20-289
Cow position: chr27:29504807-29504543 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 10

Conread position: 20-301
Cow position: chr27:20641494-20641225 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 27

Conread position: 20-310
Cow position: chr27:20549872-20549583 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 73, 128

Conread position: 23-310
Cow position: chr27:24477260-24477538 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 188, 7

Conread position: 23-311
Cow position: chr27:24321032-24321312 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 207, 52

Conread position: 28-310
Cow position: chr27:1122879-1123156 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 197, 82

Conread position: 30-299
Cow position: chr27:21213637-21213885 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 31-303
Cow position: chr27:26150868-26151138 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 134

Conread position: 32-310
Cow position: chr27:8353330-8353598 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 193, 65

Conread position: 39-303
Cow position: chr27:24014881-24014622 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 178, 107

Conread position: 52-299
Cow position: chr27:16625771-16626010 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 172, 46

Conread position: 52-309
Cow position: chr27:4806030-4805788 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 53-280
Cow position: chr27:20092962-20092743 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 53-310
Cow position: chr27:30550862-30551121 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 107

Conread position: 64-309
Cow position: chr27:18593156-18593391 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 160, 46

Conread position: 67-291
Cow position: chr27:4858753-4858540 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 67-307
Cow position: chr27:22454889-22454655 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 163, 79

Conread position: 67-309
Cow position: chr27:4835720-4835487 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 167, 93

Conread position: 67-310
Cow position: chr27:1498202-1498442 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 157, 59

Conread position: 67-310
Cow position: chr27:4812997-4812755 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 163, 97

Conread position: 67-321
Cow position: chr27:23472145-23472388 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 68-302
Cow position: chr27:26920024-26919785 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 93

Conread position: 68-303
Cow position: chr27:4829924-4829685 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 10

Conread position: 68-310
Cow position: chr27:3784-4009 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 68-310
Cow position: chr27:29312787-29312548 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 154, 78

Conread position: 69-310
Cow position: chr27:815250-815491 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 92

Conread position: 71-303
Cow position: chr27:26428242-26428014 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 153, 110

Conread position: 71-306
Cow position: chr27:30890181-30890408 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 153, 79

Conread position: 71-309
Cow position: chr27:20918781-20919013 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 185, 49

Conread position: 71-311
Cow position: chr27:435124-435358 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 106, 75

Conread position: 76-302
Cow position: chr27:20789484-20789260 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 99, 77

Conread position: 79-310
Cow position: chr27:26865219-26864995 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 139, 17

Conread position: 109-310
Cow position: chr27:154291-154490 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 115, 51

Conread position: 117-310
Cow position: chr27:28061825-28061639 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 35

Conread position: 118-315
Cow position: chr27:9697713-9697908 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 42

Conread position: 122-301
Cow position: chr27:16871975-16871797 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 36

Conread position: 159-310
Cow position: chr27:15859116-15858965 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 37

Conread position: 164-303
Cow position: chr27:30856407-30856272 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 165-303
Cow position: chr27:28164425-28164288 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 21

Show alignments to all cow chromosomes.