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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8017F08.3
        

               
Conread position:
               
1-310
               

               
Cow position:
               
chrX:34543946-34543644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
251, 61
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chrX:23092033-23091739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chrX:2936115-2935952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chrX:40531884-40532080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chrX:27771809-27772092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chrX:36068178-36067884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chrX:41878775-41879067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
217, 48
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chrX:9416525-9416832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chrX:5118340-5118643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chrX:20339735-20340029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
219, 26
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chrX:6407702-6407410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chrX:10831329-10831635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chrX:25035223-25035526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chrX:31252566-31252276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
220, 26
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chrX:33493936-33493636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chrX:40035281-40035582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chrX:41884253-41884556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chrX:45175011-45174707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chrX:45502305-45502010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chrX:46532332-46532649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chrX:35985975-35985770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
168, 25
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chrX:43115308-43115021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
169, 24
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chrX:38006612-38006905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chrX:9252004-9252317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chrX:11656239-11655950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
219, 25
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chrX:13647627-13647927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
217, 25
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chrX:38549607-38549310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chrX:38642406-38642119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
234, 33
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chrX:42235367-42235675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
219, 23
               

               
Conread position:
               
6-305
               

               
Cow position:
               
chrX:878221-878513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chrX:12979677-12979968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chrX:21986135-21986433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
171, 26
               

               
Conread position:
               
7-151
               

               
Cow position:
               
chrX:35387770-35387910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chrX:6599626-6599821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
170, 23
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chrX:11325939-11326137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chrX:16984796-16984590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
163, 23
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chrX:22115162-22115353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chrX:22392829-22393035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
171, 22
               

               
Conread position:
               
7-250
               

               
Cow position:
               
chrX:41192860-41192626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
7-267
               

               
Cow position:
               
chrX:18272903-18273156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
175, 16
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chrX:169390-169646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
254, 23
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chrX:42927668-42927933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
217, 23
               

               
Conread position:
               
7-284
               

               
Cow position:
               
chrX:24331932-24331662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chrX:5017265-5017543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chrX:27393870-27394149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
199, 23
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chrX:13177320-13177596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chrX:34504894-34505178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
7-301
               

               
Cow position:
               
chrX:34532677-34532389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chrX:7710380-7710678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chrX:31436630-31436343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
217, 21
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chrX:34238878-34238585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
7-305
               

               
Cow position:
               
chrX:24365667-24365965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
7-307
               

               
Cow position:
               
chrX:616102-616401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
217, 138
               

               
Conread position:
               
7-308
               

               
Cow position:
               
chrX:11717627-11717924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
223, 23
               

               
Conread position:
               
7-308
               

               
Cow position:
               
chrX:16762929-16762626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
7-308
               

               
Cow position:
               
chrX:41526373-41526661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
219, 23
               

               
Conread position:
               
7-309
               

               
Cow position:
               
chrX:9365520-9365815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
217, 23
               

               
Conread position:
               
7-309
               

               
Cow position:
               
chrX:14275587-14275874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
173, 23
               

               
Conread position:
               
7-309
               

               
Cow position:
               
chrX:42247026-42247321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:618852-619146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:13382481-13382187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:14599688-14599391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:14883798-14884100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:17726132-17725832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
217, 148
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:21672717-21672413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:26493162-26492864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:27145760-27145481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:27175154-27174853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:27431760-27432056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:29601672-29601971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
217, 23
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:29680104-29680402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
217, 143
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:32821184-32820886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
217, 23
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:34402162-34401856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:34412002-34411702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 23
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:34503078-34502780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:35543045-35542753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:38094365-38094665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
223, 21
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:40269650-40269346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
26, 169
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:40480709-40481011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chrX:46072661-46072959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
215, 23
               

               
Conread position:
               
8-243
               

               
Cow position:
               
chrX:19469353-19469575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
8-301
               

               
Cow position:
               
chrX:44397165-44396886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
216, 70
               

               
Conread position:
               
8-303
               

               
Cow position:
               
chrX:41871221-41870938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
169, 14
               

               
Conread position:
               
8-305
               

               
Cow position:
               
chrX:5919652-5919359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 150
               

               
Conread position:
               
8-305
               

               
Cow position:
               
chrX:41027314-41027020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
8-309
               

               
Cow position:
               
chrX:12309231-12309526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
8-310
               

               
Cow position:
               
chrX:9201702-9201408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
216, 7
               

               
Conread position:
               
8-310
               

               
Cow position:
               
chrX:34792158-34792449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
8-310
               

               
Cow position:
               
chrX:42171139-42171438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chrX:38853355-38853037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
9-152
               

               
Cow position:
               
chrX:27668804-27668946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chrX:29050402-29050166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
158, 94
               

               
Conread position:
               
9-260
               

               
Cow position:
               
chrX:1466317-1466069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
215, 146
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chrX:34836912-34837156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
204, 14
               

               
Conread position:
               
9-303
               

               
Cow position:
               
chrX:6414195-6413909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
215, 21
               

               
Conread position:
               
9-310
               

               
Cow position:
               
chrX:8869247-8869544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
214, 137
               

               
Conread position:
               
9-310
               

               
Cow position:
               
chrX:17795137-17794843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 146
               

               
Conread position:
               
9-310
               

               
Cow position:
               
chrX:37780954-37781256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 145
               

               
Conread position:
               
9-310
               

               
Cow position:
               
chrX:47344450-47344156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chrX:45414153-45414443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
215, 33
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chrX:27306608-27306410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
11-250
               

               
Cow position:
               
chrX:5135368-5135607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
11-273
               

               
Cow position:
               
chrX:34377094-34376842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
166, 18
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chrX:26881412-26881688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
212, 135
               

               
Conread position:
               
11-300
               

               
Cow position:
               
chrX:40685176-40685463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
213, 19
               

               
Conread position:
               
11-303
               

               
Cow position:
               
chrX:28865853-28866131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
11-309
               

               
Cow position:
               
chrX:31312181-31311888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 19
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chrX:22482534-22482827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chrX:23513866-23514157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
213, 12
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chrX:34441298-34441594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chrX:40557524-40557823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 138
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chrX:45429869-45430155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
270, 143
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chrX:9635038-9635427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
213, 93
               

               
Conread position:
               
12-299
               

               
Cow position:
               
chrX:45977077-45976789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
212, 28
               

               
Conread position:
               
12-310
               

               
Cow position:
               
chrX:1615895-1616186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
12-310
               

               
Cow position:
               
chrX:30543134-30543429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
138, 11
               

               
Conread position:
               
12-310
               

               
Cow position:
               
chrX:33855069-33855375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
12-310
               

               
Cow position:
               
chrX:34314175-34313891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
163, 17
               

               
Conread position:
               
12-327
               

               
Cow position:
               
chrX:31442679-31442981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 8
               

               
Conread position:
               
13-310
               

               
Cow position:
               
chrX:22074950-22074658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
13-310
               

               
Cow position:
               
chrX:29289728-29289438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
211, 16
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chrX:4152882-4153101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
210, 16
               

               
Conread position:
               
15-299
               

               
Cow position:
               
chrX:42469792-42470072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 141
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chrX:7695892-7695615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
19-310
               

               
Cow position:
               
chrX:20584472-20584180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
192, 11
               

               
Conread position:
               
19-310
               

               
Cow position:
               
chrX:45110800-45110517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
22-303
               

               
Cow position:
               
chrX:37986367-37986098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
23-233
               

               
Cow position:
               
chrX:46429679-46429881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
23-309
               

               
Cow position:
               
chrX:10959254-10959538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
164, 123
               

               
Conread position:
               
23-373
               

               
Cow position:
               
chrX:39558210-39558552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
201, 15
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chrX:37232547-37232271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
200, 122
               

               
Conread position:
               
25-297
               

               
Cow position:
               
chrX:29121185-29120917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
197, 5
               

               
Conread position:
               
29-310
               

               
Cow position:
               
chrX:6544389-6544114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
193, 70
               

               
Conread position:
               
33-310
               

               
Cow position:
               
chrX:37574971-37574714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
33-323
               

               
Cow position:
               
chrX:45846232-45845944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
190, 94
               

               
Conread position:
               
47-310
               

               
Cow position:
               
chrX:10411869-10412127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
177, 103
               

               
Conread position:
               
52-303
               

               
Cow position:
               
chrX:34565396-34565148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
176, 36
               

               
Conread position:
               
52-309
               

               
Cow position:
               
chrX:21566519-21566261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
172, 102
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chrX:7509251-7509000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
172, 42
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chrX:11082510-11082756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
52-310
               

               
Cow position:
               
chrX:38936812-38936558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
172, 100
               

               
Conread position:
               
55-310
               

               
Cow position:
               
chrX:26625562-26625815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
226, 104
               

               
Conread position:
               
62-309
               

               
Cow position:
               
chrX:11073089-11073329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
167, 97
               

               
Conread position:
               
64-310
               

               
Cow position:
               
chrX:17662498-17662735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
160, 39
               

               
Conread position:
               
64-310
               

               
Cow position:
               
chrX:38066355-38066592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
112, 82
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chrX:1499762-1499534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
151, 79
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chrX:7572002-7571771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
157, 89
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chrX:27680495-27680266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 83
               

               
Conread position:
               
67-303
               

               
Cow position:
               
chrX:13913172-13912945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
67-307
               

               
Cow position:
               
chrX:8925796-8925562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
157, 83
               

               
Conread position:
               
67-307
               

               
Cow position:
               
chrX:35224393-35224155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
157, 87
               

               
Conread position:
               
67-310
               

               
Cow position:
               
chrX:11938836-11939069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 90
               

               
Conread position:
               
67-310
               

               
Cow position:
               
chrX:22624573-22624342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
67-310
               

               
Cow position:
               
chrX:35273461-35273214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
67-310
               

               
Cow position:
               
chrX:38218811-38218569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 98
               

               
Conread position:
               
67-351
               

               
Cow position:
               
chrX:19273610-19273906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
120, 93
               

               
Conread position:
               
68-281
               

               
Cow position:
               
chrX:9650928-9651138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
156, 82
               

               
Conread position:
               
68-303
               

               
Cow position:
               
chrX:7646347-7646121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
156, 85
               

               
Conread position:
               
68-307
               

               
Cow position:
               
chrX:37910541-37910312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
71-303
               

               
Cow position:
               
chrX:15815177-15814952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 92
               

               
Conread position:
               
71-310
               

               
Cow position:
               
chrX:11856523-11856286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
146, 111
               

               
Conread position:
               
71-310
               

               
Cow position:
               
chrX:23563698-23563935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
159, 82
               

               
Conread position:
               
71-310
               

               
Cow position:
               
chrX:33000998-33000765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
71-323
               

               
Cow position:
               
chrX:40826658-40826912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
153, 75
               

               
Conread position:
               
73-310
               

               
Cow position:
               
chrX:6278407-6278644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
74-310
               

               
Cow position:
               
chrX:29542127-29542361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
148, 86
               

               
Conread position:
               
85-310
               

               
Cow position:
               
chrX:11589509-11589730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
139, 67
               

               
Conread position:
               
92-310
               

               
Cow position:
               
chrX:678483-678706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
100-301
               

               
Cow position:
               
chrX:34192734-34192540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
124, 46
               

               
Conread position:
               
100-310
               

               
Cow position:
               
chrX:13785296-13785505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
100-310
               

               
Cow position:
               
chrX:26875817-26876025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
118-310
               

               
Cow position:
               
chrX:34991082-34990893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
123-310
               

               
Cow position:
               
chrX:42994654-42994474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
158-301
               

               
Cow position:
               
chrX:20583033-20582895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
159-310
               

               
Cow position:
               
chrX:4750293-4750446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 5
               

               
Conread position:
               
170-310
               

               
Cow position:
               
chrX:11806012-11806155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
178-310
               

               
Cow position:
               
chrX:35387909-35388044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
189-310
               

               
Cow position:
               
chrX:10366244-10366368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 8
               
Show alignments to all cow chromosomes.