Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8018F21.3 |
| Conread position: | 1-701 |
| Cow position: | chr10:8996588-8995894 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 589 |
| Conread position: | 5-277 |
| Cow position: | chr10:9010144-9009869 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 156, 210 |
| Conread position: | 5-753 |
| Cow position: | chr10:8996752-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 168 |
| Conread position: | 7-355 |
| Cow position: | chr10:9031259-9031610 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 7-479 |
| Cow position: | chr10:9010310-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 146, 165 |
| Conread position: | 7-832 |
| Cow position: | chr10:8996834-8996006 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 772 |
| Conread position: | 8-731 |
| Cow position: | chr10:9010561-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 9-493 |
| Cow position: | chr10:9031177-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 41-841 |
| Cow position: | chr10:8996884-8996081 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 740 |
| Conread position: | 42-501 |
| Cow position: | chr10:9031695-9032156 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 170 |
| Conread position: | 49-610 |
| Cow position: | chr10:21939192-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 94 |
| Conread position: | 50-778 |
| Cow position: | chr10:21939345-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 116 |
| Conread position: | 94-816 |
| Cow position: | chr10:9010559-9009834 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 168-864 |
| Cow position: | chr10:8996839-8996142 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 609 |
| Conread position: | 172-859 |
| Cow position: | chr10:9010562-9009875 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 131 |
| Conread position: | 223-577 |
| Cow position: | chr10:9031310-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 233-859 |
| Cow position: | chr10:9010585-9009959 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 150 |
| Conread position: | 241-859 |
| Cow position: | chr10:8996849-8996231 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 566, 570 |
| Conread position: | 259-664 |
| Cow position: | chr10:9031262-9031667 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 262-863 |
| Cow position: | chr10:21939228-21938628 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 457 |
| Conread position: | 280-859 |
| Cow position: | chr10:8996894-8996315 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 513, 496 |
| Conread position: | 343-745 |
| Cow position: | chr10:9031262-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-787 |
| Cow position: | chr10:9031664-9032108 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 150, 339 |
| Conread position: | 347-829 |
| Cow position: | chr10:9031182-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-864 |
| Cow position: | chr10:8996882-8996394 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 409-839 |
| Cow position: | chr10:8996933-8996503 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 402 |
| Conread position: | 477-859 |
| Cow position: | chr10:9031228-9031610 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 479-848 |
| Cow position: | chr10:9010591-9010223 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 314, 297 |
| Conread position: | 493-857 |
| Cow position: | chr10:8996933-8996569 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 226 |
| Conread position: | 563-864 |
| Cow position: | chr10:9010591-9010290 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 596-789 |
| Cow position: | chr10:9031664-9031857 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 150, 184 |
Show alignments to all cow chromosomes.