Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8018F21.3 |
| Conread position: | 1-790 |
| Cow position: | chr13:39984073-39984864 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 718 |
| Conread position: | 8-846 |
| Cow position: | chr13:39983996-39984837 (view UCSC Genome Browser custom track) |
| Alignm length: | 845 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 263 |
| Conread position: | 16-523 |
| Cow position: | chr13:39930668-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 156 |
| Conread position: | 31-568 |
| Cow position: | chr13:56292320-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 123 |
| Conread position: | 48-841 |
| Cow position: | chr13:22124897-22125693 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 124 |
| Conread position: | 49-607 |
| Cow position: | chr13:39930617-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 123 |
| Conread position: | 49-859 |
| Cow position: | chr13:24162708-24163521 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 477 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 108, 123 |
| Conread position: | 52-834 |
| Cow position: | chr13:56333604-56334395 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 91 |
| Conread position: | 54-817 |
| Cow position: | chr13:56292554-56291793 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 58-840 |
| Cow position: | chr13:24162465-24163250 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 473 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 99, 114 |
| Conread position: | 70-839 |
| Cow position: | chr13:39983974-39984746 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 114 |
| Conread position: | 70-859 |
| Cow position: | chr13:56292707-56291920 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 196 |
| Conread position: | 75-839 |
| Cow position: | chr13:39983810-39984578 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 65 |
| Conread position: | 94-865 |
| Cow position: | chr13:56292846-56292083 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 109 |
| Conread position: | 102-744 |
| Cow position: | chr13:39984258-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 71 |
| Conread position: | 135-843 |
| Cow position: | chr13:56333603-56334323 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 247 |
| Conread position: | 143-827 |
| Cow position: | chr13:56292549-56291868 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 191-775 |
| Cow position: | chr13:39930594-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 107 |
| Conread position: | 222-745 |
| Cow position: | chr13:29183760-29183241 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 223-534 |
| Cow position: | chr13:56317487-56317796 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 223-736 |
| Cow position: | chr13:56292293-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 83 |
| Conread position: | 223-839 |
| Cow position: | chr13:22124739-22125355 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 362 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 336, 325 |
| Conread position: | 223-861 |
| Cow position: | chr13:56333526-56334173 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 524, 0 |
| Conread position: | 225-776 |
| Cow position: | chr13:56292879-56292334 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 229-840 |
| Cow position: | chr13:22124827-22125440 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 365 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 273 |
| Conread position: | 257-860 |
| Cow position: | chr13:39930576-39931177 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 293 |
| Conread position: | 352-831 |
| Cow position: | chr13:29183798-29183323 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 361-866 |
| Cow position: | chr13:56317295-56317792 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 382-865 |
| Cow position: | chr13:56333517-56334000 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 333 |
| Conread position: | 396-839 |
| Cow position: | chr13:39983799-39984242 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 66 |
| Conread position: | 419-845 |
| Cow position: | chr13:56317879-56318306 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 138, 46 |
| Conread position: | 538-860 |
| Cow position: | chr13:56333505-56333827 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.