• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8018F21.3
        

               
Conread position:
               
1-322
               

               
Cow position:
               
chr18:42984795-42984471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr18:40075368-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr18:43119810-43119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr18:44240438-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr18:42674724-42674249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 138
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr18:50281851-50282341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
148, 172
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr18:51765401-51764901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 191
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:42959870-42959377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 120
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:54968047-54968548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:55523821-55524339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr18:50271638-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 172
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr18:43093325-43092791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 118
               

               
Conread position:
               
1-572
               

               
Cow position:
               
chr18:22634649-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
162, 209
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:53498404-53498985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr18:40075116-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 215
               

               
Conread position:
               
1-596
               

               
Cow position:
               
chr18:55066933-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
1-598
               

               
Cow position:
               
chr18:55523737-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr18:56434390-56434994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 94
               

               
Conread position:
               
1-621
               

               
Cow position:
               
chr18:53525869-53526490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 138
               

               
Conread position:
               
1-622
               

               
Cow position:
               
chr18:42693535-42692916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr18:42960038-42959415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
1-648
               

               
Cow position:
               
chr18:50848848-50849498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
1-656
               

               
Cow position:
               
chr18:1417927-1418585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 171
               

               
Conread position:
               
1-668
               

               
Cow position:
               
chr18:50048794-50048129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 459
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:55523653-55524329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 218
               

               
Conread position:
               
1-689
               

               
Cow position:
               
chr18:52428314-52429004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
1-690
               

               
Cow position:
               
chr18:51752158-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 120
               

               
Conread position:
               
1-695
               

               
Cow position:
               
chr18:56493853-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
1-701
               

               
Cow position:
               
chr18:43120230-43119527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
1-701
               

               
Cow position:
               
chr18:53525785-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr18:51812623-51811904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 715
               

               
Conread position:
               
1-733
               

               
Cow position:
               
chr18:53509415-53510154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 138
               

               
Conread position:
               
1-741
               

               
Cow position:
               
chr18:50059110-50058369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 206
               

               
Conread position:
               
1-749
               

               
Cow position:
               
chr18:54967797-54968546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
1-754
               

               
Cow position:
               
chr18:42792149-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 212
               

               
Conread position:
               
1-757
               

               
Cow position:
               
chr18:44398262-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 310
               

               
Conread position:
               
1-758
               

               
Cow position:
               
chr18:52428230-52428990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-759
               

               
Cow position:
               
chr18:43175263-43174502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 602
               

               
Conread position:
               
1-759
               

               
Cow position:
               
chr18:55018141-55018901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 119
               

               
Conread position:
               
1-765
               

               
Cow position:
               
chr18:56329590-56328824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 171
               

               
Conread position:
               
1-768
               

               
Cow position:
               
chr18:51400457-51401227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 667
               

               
Conread position:
               
1-777
               

               
Cow position:
               
chr18:54979737-54980516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 119
               

               
Conread position:
               
1-778
               

               
Cow position:
               
chr18:51789380-51788602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
1-785
               

               
Cow position:
               
chr18:52433411-52434198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-786
               

               
Cow position:
               
chr18:51368005-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-787
               

               
Cow position:
               
chr18:40324707-40323919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 372
               

               
Conread position:
               
1-787
               

               
Cow position:
               
chr18:42694039-42693250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 212
               

               
Conread position:
               
1-787
               

               
Cow position:
               
chr18:55008486-55009273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 70
               

               
Conread position:
               
1-798
               

               
Cow position:
               
chr18:49032869-49032069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 778
               

               
Conread position:
               
1-799
               

               
Cow position:
               
chr18:41949087-41948288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
803
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
1-801
               

               
Cow position:
               
chr18:51789464-51788662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
1-819
               

               
Cow position:
               
chr18:40306177-40306998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 433
               

               
Conread position:
               
1-829
               

               
Cow position:
               
chr18:41949171-41948340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 138
               

               
Conread position:
               
1-829
               

               
Cow position:
               
chr18:43022978-43022147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
1-832
               

               
Cow position:
               
chr18:52428062-52428896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
839
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
1-832
               

               
Cow position:
               
chr18:52433243-52434077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-832
               

               
Cow position:
               
chr18:52447453-52448287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
583
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 798
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr18:53559935-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
840
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 301
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr18:53586822-53585987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr18:54979905-54980737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
842
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr18:54993249-54994081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
840
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 226
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr18:55018057-55018891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
842
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
1-839
               

               
Cow position:
               
chr18:40306262-40307103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
1-839
               

               
Cow position:
               
chr18:42791897-42792738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 295
               

               
Conread position:
               
1-839
               

               
Cow position:
               
chr18:44253798-44252971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
1-839
               

               
Cow position:
               
chr18:54979821-54980661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr18:33064509-33063666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 94
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr18:33064593-33063750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
848
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 210
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr18:42791729-42792572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr18:42960290-42959456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr18:44253631-44252811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 119
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr18:50083291-50084134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr18:50083375-50084218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 171
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr18:56330094-56329251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 171
               

               
Conread position:
               
1-842
               

               
Cow position:
               
chr18:44253546-44252726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 165
               

               
Conread position:
               
1-843
               

               
Cow position:
               
chr18:41197920-41198765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
1-846
               

               
Cow position:
               
chr18:51368341-51367494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 526
               

               
Conread position:
               
1-859
               

               
Cow position:
               
chr18:42693871-42693010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
1-859
               

               
Cow position:
               
chr18:51368089-51367229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 292
               

               
Conread position:
               
1-859
               

               
Cow position:
               
chr18:51765821-51764960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
1-859
               

               
Cow position:
               
chr18:52427894-52428755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-859
               

               
Cow position:
               
chr18:52447033-52447894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-859
               

               
Cow position:
               
chr18:54992829-54993690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 220
               

               
Conread position:
               
1-859
               

               
Cow position:
               
chr18:54992913-54993774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
1-859
               

               
Cow position:
               
chr18:54992997-54993858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 226
               

               
Conread position:
               
1-863
               

               
Cow position:
               
chr18:53635867-53635001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-864
               

               
Cow position:
               
chr18:41197752-41198618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
1-864
               

               
Cow position:
               
chr18:53498062-53498932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 142
               

               
Conread position:
               
1-866
               

               
Cow position:
               
chr18:50848428-50849295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 212
               

               
Conread position:
               
1-866
               

               
Cow position:
               
chr18:52447117-52447984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 178
               

               
Conread position:
               
1-866
               

               
Cow position:
               
chr18:55017805-55018672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
1-866
               

               
Cow position:
               
chr18:56433980-56434836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 37
               

               
Conread position:
               
1-867
               

               
Cow position:
               
chr18:51400289-51401158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
1-867
               

               
Cow position:
               
chr18:54967128-54967993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 94
               

               
Conread position:
               
1-870
               

               
Cow position:
               
chr18:51765905-51765033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
1-884
               

               
Cow position:
               
chr18:33064929-33064044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
891
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
2-667
               

               
Cow position:
               
chr18:52447790-52448459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 171
               

               
Conread position:
               
2-668
               

               
Cow position:
               
chr18:50281684-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 211
               

               
Conread position:
               
2-752
               

               
Cow position:
               
chr18:40074949-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 384
               

               
Conread position:
               
2-758
               

               
Cow position:
               
chr18:52447622-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
2-833
               

               
Cow position:
               
chr18:42744623-42743789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 170
               

               
Conread position:
               
2-839
               

               
Cow position:
               
chr18:53586905-53586065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 312
               

               
Conread position:
               
2-841
               

               
Cow position:
               
chr18:52447538-52448381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 171
               

               
Conread position:
               
2-859
               

               
Cow position:
               
chr18:51812874-51812014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
2-859
               

               
Cow position:
               
chr18:52427559-52428419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
574
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
2-859
               

               
Cow position:
               
chr18:52432908-52433768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
2-859
               

               
Cow position:
               
chr18:54992746-54993606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
3-834
               

               
Cow position:
               
chr18:51400375-51401209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 304
               

               
Conread position:
               
4-673
               

               
Cow position:
               
chr18:56265293-56264622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
245, 21
               

               
Conread position:
               
4-774
               

               
Cow position:
               
chr18:51752239-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
4-785
               

               
Cow position:
               
chr18:50098987-50099771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 211
               

               
Conread position:
               
4-839
               

               
Cow position:
               
chr18:43093898-43093072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 170
               

               
Conread position:
               
4-859
               

               
Cow position:
               
chr18:51789629-51788771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 169
               

               
Conread position:
               
4-864
               

               
Cow position:
               
chr18:14454008-14453169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 199
               

               
Conread position:
               
4-864
               

               
Cow position:
               
chr18:42791312-42792175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 188
               

               
Conread position:
               
4-864
               

               
Cow position:
               
chr18:50022391-50021523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr18:1418351-1418613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
155, 208
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr18:50246510-50246785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
148, 208
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:50058686-50058275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
5-472
               

               
Cow position:
               
chr18:51812367-51811897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
108, 118
               

               
Conread position:
               
5-498
               

               
Cow position:
               
chr18:42837587-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-499
               

               
Cow position:
               
chr18:43022470-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
5-499
               

               
Cow position:
               
chr18:43168057-43168554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
5-501
               

               
Cow position:
               
chr18:42744284-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
5-504
               

               
Cow position:
               
chr18:43174923-43174430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 167
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr18:43119974-43119464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-520
               

               
Cow position:
               
chr18:14453275-14452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
5-537
               

               
Cow position:
               
chr18:51969522-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
156, 96
               

               
Conread position:
               
5-551
               

               
Cow position:
               
chr18:42959950-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-612
               

               
Cow position:
               
chr18:50295285-50295894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 219
               

               
Conread position:
               
5-612
               

               
Cow position:
               
chr18:51969438-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 370
               

               
Conread position:
               
5-617
               

               
Cow position:
               
chr18:43048715-43048090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
155, 167
               

               
Conread position:
               
5-620
               

               
Cow position:
               
chr18:50295537-50296143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
155, 190
               

               
Conread position:
               
5-671
               

               
Cow position:
               
chr18:56247716-56247059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 214
               

               
Conread position:
               
5-695
               

               
Cow position:
               
chr18:56434226-56434919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 115
               

               
Conread position:
               
5-708
               

               
Cow position:
               
chr18:40086333-40085636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 117
               

               
Conread position:
               
5-745
               

               
Cow position:
               
chr18:44240106-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
5-747
               

               
Cow position:
               
chr18:42837839-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 167
               

               
Conread position:
               
5-748
               

               
Cow position:
               
chr18:40306602-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
5-755
               

               
Cow position:
               
chr18:43175175-43174431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 272
               

               
Conread position:
               
5-774
               

               
Cow position:
               
chr18:44154018-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
5-779
               

               
Cow position:
               
chr18:51839296-51838501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 301
               

               
Conread position:
               
5-786
               

               
Cow position:
               
chr18:56128470-56129252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 148
               

               
Conread position:
               
5-790
               

               
Cow position:
               
chr18:43120310-43119523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-794
               

               
Cow position:
               
chr18:44398342-44397552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 370
               

               
Conread position:
               
5-824
               

               
Cow position:
               
chr18:42675224-42674402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 134
               

               
Conread position:
               
5-829
               

               
Cow position:
               
chr18:42985295-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
834
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
5-833
               

               
Cow position:
               
chr18:42790977-42791808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 306
               

               
Conread position:
               
5-834
               

               
Cow position:
               
chr18:50848348-50849180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
839
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 297
               

               
Conread position:
               
5-834
               

               
Cow position:
               
chr18:53610370-53609534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
848
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr18:40306434-40307273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 222
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr18:41197588-41198427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
589
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr18:42744704-42743865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
840
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr18:42791985-42792824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr18:49033033-49032194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr18:56248062-56247221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 186
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr18:56315978-56316817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 138
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr18:56329922-56329083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
843
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
5-846
               

               
Cow position:
               
chr18:40086501-40085666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 295
               

               
Conread position:
               
5-846
               

               
Cow position:
               
chr18:44253710-44252887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 333
               

               
Conread position:
               
5-857
               

               
Cow position:
               
chr18:41197672-41198527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 774
               

               
Conread position:
               
5-858
               

               
Cow position:
               
chr18:51812787-51811931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-859
               

               
Cow position:
               
chr18:40324871-40324014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
586
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
5-859
               

               
Cow position:
               
chr18:42791145-42792002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
5-859
               

               
Cow position:
               
chr18:50848180-50849037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 124
               

               
Conread position:
               
5-859
               

               
Cow position:
               
chr18:52427982-52428839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-860
               

               
Cow position:
               
chr18:42792069-42792929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 214
               

               
Conread position:
               
5-862
               

               
Cow position:
               
chr18:44184873-44184011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-864
               

               
Cow position:
               
chr18:40324787-40323926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
5-864
               

               
Cow position:
               
chr18:41197840-41198702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
580
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 167
               

               
Conread position:
               
5-864
               

               
Cow position:
               
chr18:42985379-42984518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 133
               

               
Conread position:
               
5-864
               

               
Cow position:
               
chr18:43022890-43022029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 133
               

               
Conread position:
               
5-864
               

               
Cow position:
               
chr18:43093981-43093131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 115
               

               
Conread position:
               
5-864
               

               
Cow position:
               
chr18:44154270-44153427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
5-865
               

               
Cow position:
               
chr18:53636031-53635168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 168
               

               
Conread position:
               
5-866
               

               
Cow position:
               
chr18:53586986-53586123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 211
               

               
Conread position:
               
5-866
               

               
Cow position:
               
chr18:55017893-55018757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
5-867
               

               
Cow position:
               
chr18:54966964-54967825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 141
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr18:51765732-51764904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 114
               

               
Conread position:
               
6-838
               

               
Cow position:
               
chr18:49022494-49023327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 106
               

               
Conread position:
               
6-859
               

               
Cow position:
               
chr18:51839127-51838257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
155, 167
               

               
Conread position:
               
7-701
               

               
Cow position:
               
chr18:51838771-51838084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
151, 186
               

               
Conread position:
               
7-702
               

               
Cow position:
               
chr18:56316232-56316930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 172
               

               
Conread position:
               
7-707
               

               
Cow position:
               
chr18:51839546-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 166
               

               
Conread position:
               
7-742
               

               
Cow position:
               
chr18:50048872-50048140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 216
               

               
Conread position:
               
7-765
               

               
Cow position:
               
chr18:55067095-55066336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 133
               

               
Conread position:
               
7-785
               

               
Cow position:
               
chr18:50022220-50021433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
796
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
7-787
               

               
Cow position:
               
chr18:53509253-53510035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
7-789
               

               
Cow position:
               
chr18:53525707-53526489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
7-795
               

               
Cow position:
               
chr18:44154184-44153412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 205
               

               
Conread position:
               
7-826
               

               
Cow position:
               
chr18:49032947-49032125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 165
               

               
Conread position:
               
7-839
               

               
Cow position:
               
chr18:42985461-42984626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 205
               

               
Conread position:
               
7-841
               

               
Cow position:
               
chr18:33064839-33064002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 88
               

               
Conread position:
               
7-841
               

               
Cow position:
               
chr18:43175593-43174756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
842
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 712
               

               
Conread position:
               
7-841
               

               
Cow position:
               
chr18:44398424-44397587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
839
               

               
Alignm identity:
               
582
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 772
               

               
Conread position:
               
7-841
               

               
Cow position:
               
chr18:49033115-49032278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
840
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 779
               

               
Conread position:
               
7-842
               

               
Cow position:
               
chr18:56128304-56129141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 166
               

               
Conread position:
               
7-858
               

               
Cow position:
               
chr18:51789542-51788688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 116
               

               
Conread position:
               
7-859
               

               
Cow position:
               
chr18:52427648-52428503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 166
               

               
Conread position:
               
7-859
               

               
Cow position:
               
chr18:52433165-52434020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
580
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
7-859
               

               
Cow position:
               
chr18:53636113-53635258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 206
               

               
Conread position:
               
7-859
               

               
Cow position:
               
chr18:55523323-55524178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 212
               

               
Conread position:
               
7-859
               

               
Cow position:
               
chr18:55523407-55524262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 178
               

               
Conread position:
               
7-859
               

               
Cow position:
               
chr18:56128052-56128907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 208
               

               
Conread position:
               
7-860
               

               
Cow position:
               
chr18:51368588-51367732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
7-864
               

               
Cow position:
               
chr18:52447375-52448235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
595
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 701
               

               
Conread position:
               
7-871
               

               
Cow position:
               
chr18:49021834-49022688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
8-706
               

               
Cow position:
               
chr18:42960115-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 117
               

               
Conread position:
               
8-765
               

               
Cow position:
               
chr18:50022048-50021287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 121
               

               
Conread position:
               
8-824
               

               
Cow position:
               
chr18:43093570-43092753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 165
               

               
Conread position:
               
8-829
               

               
Cow position:
               
chr18:41949248-41948424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 184
               

               
Conread position:
               
8-839
               

               
Cow position:
               
chr18:54967639-54968468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
8-841
               

               
Cow position:
               
chr18:41949332-41948496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
842
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 165
               

               
Conread position:
               
8-859
               

               
Cow position:
               
chr18:54979492-54980346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 208
               

               
Conread position:
               
8-864
               

               
Cow position:
               
chr18:44239941-44240799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
587
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 131
               

               
Conread position:
               
9-735
               

               
Cow position:
               
chr18:50099664-50100390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 134
               

               
Conread position:
               
9-754
               

               
Cow position:
               
chr18:50083551-50084302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 214
               

               
Conread position:
               
9-767
               

               
Cow position:
               
chr18:42675136-42674373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
9-786
               

               
Cow position:
               
chr18:50083467-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 170
               

               
Conread position:
               
9-787
               

               
Cow position:
               
chr18:33093089-33092314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
9-824
               

               
Cow position:
               
chr18:43093653-43092835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 288
               

               
Conread position:
               
9-826
               

               
Cow position:
               
chr18:50246010-50246830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
9-839
               

               
Cow position:
               
chr18:43175507-43174674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
9-841
               

               
Cow position:
               
chr18:40086919-40086084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
9-846
               

               
Cow position:
               
chr18:42791065-42791905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 292
               

               
Conread position:
               
9-859
               

               
Cow position:
               
chr18:42675304-42674451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
588
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 202
               

               
Conread position:
               
9-859
               

               
Cow position:
               
chr18:50848604-50849457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 164
               

               
Conread position:
               
10-642
               

               
Cow position:
               
chr18:53635438-53634804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 163
               

               
Conread position:
               
10-703
               

               
Cow position:
               
chr18:55008661-55009355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
10-784
               

               
Cow position:
               
chr18:53635606-53634831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 162
               

               
Conread position:
               
10-786
               

               
Cow position:
               
chr18:56128391-56129169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 162
               

               
Conread position:
               
10-827
               

               
Cow position:
               
chr18:40306523-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
10-829
               

               
Cow position:
               
chr18:56329665-56328843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 217
               

               
Conread position:
               
10-833
               

               
Cow position:
               
chr18:55523494-55524320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 91
               

               
Conread position:
               
10-841
               

               
Cow position:
               
chr18:56329833-56328999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
10-859
               

               
Cow position:
               
chr18:42791570-42792422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 203
               

               
Conread position:
               
10-867
               

               
Cow position:
               
chr18:56433403-56434250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
153, 48
               

               
Conread position:
               
10-870
               

               
Cow position:
               
chr18:49033196-49032333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
10-882
               

               
Cow position:
               
chr18:50099413-50100287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
887
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
10-892
               

               
Cow position:
               
chr18:33064416-33063534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
892
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 162
               

               
Conread position:
               
13-864
               

               
Cow position:
               
chr18:42790901-42791755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 105
               

               
Conread position:
               
15-780
               

               
Cow position:
               
chr18:56433910-56434668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 113
               

               
Conread position:
               
15-833
               

               
Cow position:
               
chr18:53559865-53560686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 204
               

               
Conread position:
               
15-859
               

               
Cow position:
               
chr18:52446806-52447642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
567, 104
               

               
Conread position:
               
16-756
               

               
Cow position:
               
chr18:56316325-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 156
               

               
Conread position:
               
16-839
               

               
Cow position:
               
chr18:56329743-56328917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 618
               

               
Conread position:
               
16-842
               

               
Cow position:
               
chr18:53610527-53609699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
18-867
               

               
Cow position:
               
chr18:53587141-53586290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 198
               

               
Conread position:
               
28-787
               

               
Cow position:
               
chr18:42960177-42959426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
30-865
               

               
Cow position:
               
chr18:50059669-50058832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
842
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 195
               

               
Conread position:
               
40-859
               

               
Cow position:
               
chr18:41949384-41948562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 672
               

               
Conread position:
               
42-839
               

               
Cow position:
               
chr18:49022362-49023160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 150
               

               
Conread position:
               
42-846
               

               
Cow position:
               
chr18:51789924-51789120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
42-866
               

               
Cow position:
               
chr18:51813083-51812259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
43-829
               

               
Cow position:
               
chr18:42837885-42837096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 499
               

               
Conread position:
               
43-859
               

               
Cow position:
               
chr18:42694081-42693262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 130
               

               
Conread position:
               
45-839
               

               
Cow position:
               
chr18:43167509-43168306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 199
               

               
Conread position:
               
47-524
               

               
Cow position:
               
chr18:50030760-50030282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
105, 125
               

               
Conread position:
               
48-699
               

               
Cow position:
               
chr18:52012219-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 124
               

               
Conread position:
               
48-757
               

               
Cow position:
               
chr18:50031010-50030301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 76
               

               
Conread position:
               
48-863
               

               
Cow position:
               
chr18:50048999-50048187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 164
               

               
Conread position:
               
48-864
               

               
Cow position:
               
chr18:50245797-50246616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 133
               

               
Conread position:
               
49-599
               

               
Cow position:
               
chr18:49032485-49031935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 123
               

               
Conread position:
               
49-744
               

               
Cow position:
               
chr18:49032737-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 358
               

               
Conread position:
               
49-787
               

               
Cow position:
               
chr18:50848728-50849469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
49-805
               

               
Cow position:
               
chr18:44240066-44240825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 249
               

               
Conread position:
               
49-829
               

               
Cow position:
               
chr18:43022762-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 329
               

               
Conread position:
               
49-859
               

               
Cow position:
               
chr18:54979617-54980430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 178
               

               
Conread position:
               
49-864
               

               
Cow position:
               
chr18:54979449-54980267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 424
               

               
Conread position:
               
49-865
               

               
Cow position:
               
chr18:50022262-50021438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 173
               

               
Conread position:
               
49-867
               

               
Cow position:
               
chr18:54992709-54993529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 323
               

               
Conread position:
               
49-879
               

               
Cow position:
               
chr18:50059482-50058649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
839
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 90
               

               
Conread position:
               
50-786
               

               
Cow position:
               
chr18:53635734-53634996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 122
               

               
Conread position:
               
50-848
               

               
Cow position:
               
chr18:52447250-52448050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
805
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
53-689
               

               
Cow position:
               
chr18:53586518-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 139
               

               
Conread position:
               
53-757
               

               
Cow position:
               
chr18:56247752-56247057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 234
               

               
Conread position:
               
53-859
               

               
Cow position:
               
chr18:53559819-53560628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 250
               

               
Conread position:
               
54-552
               

               
Cow position:
               
chr18:43120009-43119508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
54-877
               

               
Cow position:
               
chr18:42675343-42674519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
587
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 119
               

               
Conread position:
               
57-829
               

               
Cow position:
               
chr18:43175291-43174516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 115
               

               
Conread position:
               
57-859
               

               
Cow position:
               
chr18:52433131-52433936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
809
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 116
               

               
Conread position:
               
57-859
               

               
Cow position:
               
chr18:56248094-56247287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 156
               

               
Conread position:
               
57-860
               

               
Cow position:
               
chr18:51368117-51367312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
809
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 120
               

               
Conread position:
               
58-461
               

               
Cow position:
               
chr18:51367613-51367207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
103, 115
               

               
Conread position:
               
58-489
               

               
Cow position:
               
chr18:22634790-22635224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 169
               

               
Conread position:
               
58-520
               

               
Cow position:
               
chr18:54993642-54994105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
103, 274
               

               
Conread position:
               
58-626
               

               
Cow position:
               
chr18:42724522-42723951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 114
               

               
Conread position:
               
58-696
               

               
Cow position:
               
chr18:51969407-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 211
               

               
Conread position:
               
58-707
               

               
Cow position:
               
chr18:42724606-42723954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
58-726
               

               
Cow position:
               
chr18:51874045-51874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 119
               

               
Conread position:
               
58-766
               

               
Cow position:
               
chr18:55523626-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
58-824
               

               
Cow position:
               
chr18:44239823-44240592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 132
               

               
Conread position:
               
58-828
               

               
Cow position:
               
chr18:55008459-55009230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 251
               

               
Conread position:
               
58-833
               

               
Cow position:
               
chr18:40074921-40075699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 166
               

               
Conread position:
               
58-839
               

               
Cow position:
               
chr18:53587017-53586233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 161
               

               
Conread position:
               
58-841
               

               
Cow position:
               
chr18:40306403-40307189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
791
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 243
               

               
Conread position:
               
58-859
               

               
Cow position:
               
chr18:56128271-56129075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 153
               

               
Conread position:
               
60-853
               

               
Cow position:
               
chr18:54967772-54968565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 167
               

               
Conread position:
               
62-779
               

               
Cow position:
               
chr18:52012289-52011569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 169
               

               
Conread position:
               
63-581
               

               
Cow position:
               
chr18:43048741-43048222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 109
               

               
Conread position:
               
63-674
               

               
Cow position:
               
chr18:42827391-42828012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 110
               

               
Conread position:
               
63-754
               

               
Cow position:
               
chr18:44184647-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 401
               

               
Conread position:
               
63-839
               

               
Cow position:
               
chr18:44398452-44397673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 719
               

               
Conread position:
               
64-620
               

               
Cow position:
               
chr18:56128781-56129339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 109
               

               
Conread position:
               
66-841
               

               
Cow position:
               
chr18:49033393-49032614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
67-859
               

               
Cow position:
               
chr18:54967530-54968320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 145
               

               
Conread position:
               
68-841
               

               
Cow position:
               
chr18:43175364-43174588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 105
               

               
Conread position:
               
69-819
               

               
Cow position:
               
chr18:50246154-50246909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
69-859
               

               
Cow position:
               
chr18:51400273-51401066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
70-657
               

               
Cow position:
               
chr18:22634634-22635224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 157
               

               
Conread position:
               
70-665
               

               
Cow position:
               
chr18:43022573-43021975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
70-786
               

               
Cow position:
               
chr18:52012448-52011731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
70-793
               

               
Cow position:
               
chr18:51969335-51970049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 274
               

               
Conread position:
               
70-827
               

               
Cow position:
               
chr18:56316127-56316887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 290
               

               
Conread position:
               
70-833
               

               
Cow position:
               
chr18:53509232-53509996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 103
               

               
Conread position:
               
70-834
               

               
Cow position:
               
chr18:44184724-44183957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 102
               

               
Conread position:
               
70-839
               

               
Cow position:
               
chr18:44239751-44240523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
70-841
               

               
Cow position:
               
chr18:50049145-50048371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 143
               

               
Conread position:
               
70-859
               

               
Cow position:
               
chr18:42791882-42792674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 576
               

               
Conread position:
               
70-859
               

               
Cow position:
               
chr18:43022993-43022201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 728
               

               
Conread position:
               
70-860
               

               
Cow position:
               
chr18:43167786-43168578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
70-860
               

               
Cow position:
               
chr18:44154460-44153671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
70-861
               

               
Cow position:
               
chr18:50059293-50058499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 122
               

               
Conread position:
               
70-864
               

               
Cow position:
               
chr18:53525686-53526481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
801
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 103
               

               
Conread position:
               
70-866
               

               
Cow position:
               
chr18:43094000-43093213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
803
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 276
               

               
Conread position:
               
71-752
               

               
Cow position:
               
chr18:14454025-14453341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 649
               

               
Conread position:
               
71-833
               

               
Cow position:
               
chr18:43093675-43092910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 229
               

               
Conread position:
               
71-834
               

               
Cow position:
               
chr18:44253896-44253143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 102
               

               
Conread position:
               
73-779
               

               
Cow position:
               
chr18:56493841-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 159
               

               
Conread position:
               
73-865
               

               
Cow position:
               
chr18:50245990-50246784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
805
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
76-779
               

               
Cow position:
               
chr18:43167624-43168330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 103
               

               
Conread position:
               
77-837
               

               
Cow position:
               
chr18:51752334-51751572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
77-859
               

               
Cow position:
               
chr18:51766081-51765296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
78-839
               

               
Cow position:
               
chr18:53636126-53635362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
78-839
               

               
Cow position:
               
chr18:56493673-56494442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
78-859
               

               
Cow position:
               
chr18:40306170-40306955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 476
               

               
Conread position:
               
79-785
               

               
Cow position:
               
chr18:50250845-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
79-787
               

               
Cow position:
               
chr18:56493758-56494474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 164
               

               
Conread position:
               
79-859
               

               
Cow position:
               
chr18:42744714-42743931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
79-878
               

               
Cow position:
               
chr18:50098978-50099779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
813
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
80-845
               

               
Cow position:
               
chr18:51969027-51969775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
81-859
               

               
Cow position:
               
chr18:51368598-51367816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 293
               

               
Conread position:
               
82-753
               

               
Cow position:
               
chr18:49021492-49022164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 87
               

               
Conread position:
               
82-841
               

               
Cow position:
               
chr18:43120317-43119555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
82-865
               

               
Cow position:
               
chr18:33093100-33092320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 90
               

               
Conread position:
               
85-834
               

               
Cow position:
               
chr18:49022489-49023239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
85-859
               

               
Cow position:
               
chr18:41197500-41198277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
85-859
               

               
Cow position:
               
chr18:53610542-53609765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
88-593
               

               
Cow position:
               
chr18:53571823-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
81, 177
               

               
Conread position:
               
88-832
               

               
Cow position:
               
chr18:55067098-55066351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 128
               

               
Conread position:
               
88-839
               

               
Cow position:
               
chr18:42694120-42693366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
88-859
               

               
Cow position:
               
chr18:53559686-53560460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 88
               

               
Conread position:
               
94-754
               

               
Cow position:
               
chr18:50281692-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 85
               

               
Conread position:
               
94-786
               

               
Cow position:
               
chr18:56248220-56247521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
94-864
               

               
Cow position:
               
chr18:40074876-40075646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
94-864
               

               
Cow position:
               
chr18:50083300-50084073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
98-781
               

               
Cow position:
               
chr18:50271483-50272167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 80
               

               
Conread position:
               
99-841
               

               
Cow position:
               
chr18:43093728-43092986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 196
               

               
Conread position:
               
101-850
               

               
Cow position:
               
chr18:56247788-56247046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 169
               

               
Conread position:
               
103-832
               

               
Cow position:
               
chr18:54966894-54967626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 124
               

               
Conread position:
               
103-839
               

               
Cow position:
               
chr18:42837909-42837170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 678
               

               
Conread position:
               
104-753
               

               
Cow position:
               
chr18:50295216-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
104-843
               

               
Cow position:
               
chr18:1417862-1418604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 307
               

               
Conread position:
               
104-880
               

               
Cow position:
               
chr18:50098919-50099698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
109-878
               

               
Cow position:
               
chr18:50059674-50058902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
130-833
               

               
Cow position:
               
chr18:55017764-55018472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 99
               

               
Conread position:
               
132-780
               

               
Cow position:
               
chr18:22634530-22635179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
132-864
               

               
Cow position:
               
chr18:50059736-50059000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
134-857
               

               
Cow position:
               
chr18:51789916-51789193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
134-859
               

               
Cow position:
               
chr18:42675596-42674871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
135-790
               

               
Cow position:
               
chr18:50049252-50048591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
137-858
               

               
Cow position:
               
chr18:42985583-42984859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 170
               

               
Conread position:
               
138-833
               

               
Cow position:
               
chr18:14454042-14453344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
138-841
               

               
Cow position:
               
chr18:44398461-44397755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 644
               

               
Conread position:
               
139-859
               

               
Cow position:
               
chr18:1417813-1418536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
141-778
               

               
Cow position:
               
chr18:44253335-44252706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
141-839
               

               
Cow position:
               
chr18:43023090-43022389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
142-539
               

               
Cow position:
               
chr18:51367613-51367213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
142-787
               

               
Cow position:
               
chr18:51874045-51874686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
142-866
               

               
Cow position:
               
chr18:53559824-53560550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
144-848
               

               
Cow position:
               
chr18:42960315-42959618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
160-461
               

               
Cow position:
               
chr18:56267456-56267156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
131, 8
               

               
Conread position:
               
160-688
               

               
Cow position:
               
chr18:14453284-14452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 8
               

               
Conread position:
               
160-825
               

               
Cow position:
               
chr18:50281678-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
160-836
               

               
Cow position:
               
chr18:43048724-43048040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
160-841
               

               
Cow position:
               
chr18:56330183-56329503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
160-859
               

               
Cow position:
               
chr18:49033378-49032680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
160-864
               

               
Cow position:
               
chr18:50271465-50272167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
162-859
               

               
Cow position:
               
chr18:50083288-50083984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
164-841
               

               
Cow position:
               
chr18:53610544-53609867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
165-833
               

               
Cow position:
               
chr18:55497698-55497030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
166-859
               

               
Cow position:
               
chr18:53636119-53635426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
166-859
               

               
Cow position:
               
chr18:56128046-56128739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
167-788
               

               
Cow position:
               
chr18:40324874-40324253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
167-841
               

               
Cow position:
               
chr18:43175832-43175176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
168-826
               

               
Cow position:
               
chr18:49022239-49022895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
168-859
               

               
Cow position:
               
chr18:43120555-43119873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
169-859
               

               
Cow position:
               
chr18:43167552-43168242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
169-867
               

               
Cow position:
               
chr18:53509249-53509947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
171-807
               

               
Cow position:
               
chr18:50022560-50021915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
171-834
               

               
Cow position:
               
chr18:50295202-50295865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
171-865
               

               
Cow position:
               
chr18:50031052-50030361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
173-864
               

               
Cow position:
               
chr18:53497988-53498679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
175-866
               

               
Cow position:
               
chr18:55067092-55066402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
175-869
               

               
Cow position:
               
chr18:55523326-55524019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
181-423
               

               
Cow position:
               
chr18:43053435-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-780
               

               
Cow position:
               
chr18:56433325-56433922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
181-864
               

               
Cow position:
               
chr18:54979332-54980015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
181-864
               

               
Cow position:
               
chr18:54992592-54993275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
183-839
               

               
Cow position:
               
chr18:54966893-54967549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 125
               

               
Conread position:
               
189-866
               

               
Cow position:
               
chr18:50281623-50282298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
190-846
               

               
Cow position:
               
chr18:51969374-51970019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
524, 240
               

               
Conread position:
               
192-841
               

               
Cow position:
               
chr18:40324930-40324284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
199-841
               

               
Cow position:
               
chr18:44239713-44240357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 178
               

               
Conread position:
               
203-779
               

               
Cow position:
               
chr18:51839430-51838855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 6
               

               
Conread position:
               
203-859
               

               
Cow position:
               
chr18:44184924-44184268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 178
               

               
Conread position:
               
209-510
               

               
Cow position:
               
chr18:43053494-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
209-787
               

               
Cow position:
               
chr18:44154486-44153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
209-841
               

               
Cow position:
               
chr18:42675437-42674805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
499, 506
               

               
Conread position:
               
209-841
               

               
Cow position:
               
chr18:42744746-42744117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
209-841
               

               
Cow position:
               
chr18:43023103-43022471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
580, 586
               

               
Conread position:
               
209-864
               

               
Cow position:
               
chr18:40086968-40086311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 99
               

               
Conread position:
               
213-754
               

               
Cow position:
               
chr18:51838730-51838199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
213-764
               

               
Cow position:
               
chr18:42724784-42724233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
155, 164
               

               
Conread position:
               
213-864
               

               
Cow position:
               
chr18:51874035-51874679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
579, 124
               

               
Conread position:
               
214-841
               

               
Cow position:
               
chr18:42985587-42984960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
215-599
               

               
Cow position:
               
chr18:51970397-51970774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
322, 152
               

               
Conread position:
               
215-841
               

               
Cow position:
               
chr18:43094182-43093574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 21
               

               
Conread position:
               
215-846
               

               
Cow position:
               
chr18:51969315-51969935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 0
               

               
Conread position:
               
220-785
               

               
Cow position:
               
chr18:42724525-42723960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
221-839
               

               
Cow position:
               
chr18:56248177-56247551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 13
               

               
Conread position:
               
222-762
               

               
Cow position:
               
chr18:42827385-42827925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
222-827
               

               
Cow position:
               
chr18:42790945-42791550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 208
               

               
Conread position:
               
222-829
               

               
Cow position:
               
chr18:42837955-42837348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
222-834
               

               
Cow position:
               
chr18:33093041-33092429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 304
               

               
Conread position:
               
222-848
               

               
Cow position:
               
chr18:42960480-42959861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 141
               

               
Conread position:
               
222-859
               

               
Cow position:
               
chr18:42837871-42837234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 157
               

               
Conread position:
               
222-859
               

               
Cow position:
               
chr18:50049246-50048605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 331
               

               
Conread position:
               
222-859
               

               
Cow position:
               
chr18:51969088-51969705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
222-864
               

               
Cow position:
               
chr18:41197556-41198198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
222-873
               

               
Cow position:
               
chr18:22634539-22635187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
223-519
               

               
Cow position:
               
chr18:40251157-40251443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
223-618
               

               
Cow position:
               
chr18:53598324-53597937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
227, 25
               

               
Conread position:
               
223-827
               

               
Cow position:
               
chr18:44254073-44253473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
563, 174
               

               
Conread position:
               
223-841
               

               
Cow position:
               
chr18:52012209-52011591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
223-848
               

               
Cow position:
               
chr18:51752269-51751645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 169
               

               
Conread position:
               
223-857
               

               
Cow position:
               
chr18:52012459-52011827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
223-859
               

               
Cow position:
               
chr18:50271443-50272079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 158
               

               
Conread position:
               
224-859
               

               
Cow position:
               
chr18:52427532-52428167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 101
               

               
Conread position:
               
224-859
               

               
Cow position:
               
chr18:52432881-52433516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 101
               

               
Conread position:
               
224-864
               

               
Cow position:
               
chr18:14454037-14453397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
224-864
               

               
Cow position:
               
chr18:55008544-55009182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 8
               

               
Conread position:
               
225-839
               

               
Cow position:
               
chr18:43120339-43119725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
226-857
               

               
Cow position:
               
chr18:53525678-53526308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
226-859
               

               
Cow position:
               
chr18:42694147-42693514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
610, 596
               

               
Conread position:
               
226-867
               

               
Cow position:
               
chr18:53509224-53509863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
226-870
               

               
Cow position:
               
chr18:51789905-51789264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
502, 15
               

               
Conread position:
               
227-585
               

               
Cow position:
               
chr18:56267474-56267116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
227-779
               

               
Cow position:
               
chr18:50848072-50848621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
228-702
               

               
Cow position:
               
chr18:43048741-43048269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
465, 422
               

               
Conread position:
               
231-841
               

               
Cow position:
               
chr18:53636138-53635528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
232-859
               

               
Cow position:
               
chr18:51839486-51838859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 322
               

               
Conread position:
               
234-785
               

               
Cow position:
               
chr18:55523301-55523851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
234-840
               

               
Cow position:
               
chr18:50295183-50295787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
234-882
               

               
Cow position:
               
chr18:53497965-53498612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 53
               

               
Conread position:
               
235-827
               

               
Cow position:
               
chr18:55067116-55066524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
235-859
               

               
Cow position:
               
chr18:51400190-51400814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
236-889
               

               
Cow position:
               
chr18:33064943-33064290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
237-859
               

               
Cow position:
               
chr18:33065110-33064488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
240-772
               

               
Cow position:
               
chr18:14453289-14452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
471, 0
               

               
Conread position:
               
240-841
               

               
Cow position:
               
chr18:56316048-56316649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 143
               

               
Conread position:
               
241-775
               

               
Cow position:
               
chr18:42724840-42724306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
163, 157
               

               
Conread position:
               
241-785
               

               
Cow position:
               
chr18:51838786-51838247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
373, 196
               

               
Conread position:
               
241-865
               

               
Cow position:
               
chr18:49021150-49021770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 292
               

               
Conread position:
               
243-857
               

               
Cow position:
               
chr18:56330185-56329571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
244-787
               

               
Cow position:
               
chr18:50250922-50251460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
245-833
               

               
Cow position:
               
chr18:49021571-49022160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
247-513
               

               
Cow position:
               
chr18:51873706-51873972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
61, 57
               

               
Conread position:
               
250-864
               

               
Cow position:
               
chr18:41197500-41198114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
251-859
               

               
Cow position:
               
chr18:49021496-49022102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
131, 76
               

               
Conread position:
               
252-839
               

               
Cow position:
               
chr18:49022239-49022824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 152
               

               
Conread position:
               
252-864
               

               
Cow position:
               
chr18:40306180-40306792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
257-523
               

               
Cow position:
               
chr18:40251578-40251839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
258-629
               

               
Cow position:
               
chr18:56267527-56267156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
258-759
               

               
Cow position:
               
chr18:53571828-53572316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
258-864
               

               
Cow position:
               
chr18:53559691-53560297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
264-537
               

               
Cow position:
               
chr18:55075111-55075385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
170, 166
               

               
Conread position:
               
264-859
               

               
Cow position:
               
chr18:51839538-51838943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
265-846
               

               
Cow position:
               
chr18:44398415-44397834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
449, 443
               

               
Conread position:
               
266-839
               

               
Cow position:
               
chr18:42694191-42693618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
268-589
               

               
Cow position:
               
chr18:40251119-40251429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
268-866
               

               
Cow position:
               
chr18:51789614-51789016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 195
               

               
Conread position:
               
275-864
               

               
Cow position:
               
chr18:42675539-42674950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
289-840
               

               
Cow position:
               
chr18:42960580-42960036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
301-824
               

               
Cow position:
               
chr18:14454043-14453521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 7
               

               
Conread position:
               
303-846
               

               
Cow position:
               
chr18:51969002-51969526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
305-880
               

               
Cow position:
               
chr18:50245721-50246296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
150, 160
               

               
Conread position:
               
308-841
               

               
Cow position:
               
chr18:40306152-40306685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
313-841
               

               
Cow position:
               
chr18:53636140-53635612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
316-768
               

               
Cow position:
               
chr18:56248245-56247806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
404, 21
               

               
Conread position:
               
316-816
               

               
Cow position:
               
chr18:43048737-43048239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
317-829
               

               
Cow position:
               
chr18:44254063-44253555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
318-843
               

               
Cow position:
               
chr18:14453295-14452769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
318-859
               

               
Cow position:
               
chr18:53497965-53498507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 50
               

               
Conread position:
               
319-859
               

               
Cow position:
               
chr18:51752340-51751801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
319-864
               

               
Cow position:
               
chr18:1417828-1418373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
468, 478
               

               
Conread position:
               
322-864
               

               
Cow position:
               
chr18:50250839-50251370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 57
               

               
Conread position:
               
322-870
               

               
Cow position:
               
chr18:51813056-51812507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 455
               

               
Conread position:
               
323-840
               

               
Cow position:
               
chr18:42724842-42724325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
323-857
               

               
Cow position:
               
chr18:50031068-50030532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
325-590
               

               
Cow position:
               
chr18:40251562-40251822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
326-864
               

               
Cow position:
               
chr18:51368602-51368063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 319
               

               
Conread position:
               
327-839
               

               
Cow position:
               
chr18:33093103-33092592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
329-864
               

               
Cow position:
               
chr18:41197495-41198030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
463, 447
               

               
Conread position:
               
330-656
               

               
Cow position:
               
chr18:51873704-51874032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 141
               

               
Conread position:
               
330-839
               

               
Cow position:
               
chr18:42837930-42837422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
477, 9
               

               
Conread position:
               
331-841
               

               
Cow position:
               
chr18:49022234-49022742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
333-859
               

               
Cow position:
               
chr18:55523316-55523842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 391
               

               
Conread position:
               
333-866
               

               
Cow position:
               
chr18:55067102-55066570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 97
               

               
Conread position:
               
335-864
               

               
Cow position:
               
chr18:40324956-40324429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
336-878
               

               
Cow position:
               
chr18:51839550-51839010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 379
               

               
Conread position:
               
338-859
               

               
Cow position:
               
chr18:50295201-50295722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
458, 438
               

               
Conread position:
               
341-864
               

               
Cow position:
               
chr18:56493689-56494215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
342-839
               

               
Cow position:
               
chr18:53571828-53572312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
343-707
               

               
Cow position:
               
chr18:40323788-40323435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
343-824
               

               
Cow position:
               
chr18:42827422-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 454
               

               
Conread position:
               
345-593
               

               
Cow position:
               
chr18:43053439-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-864
               

               
Cow position:
               
chr18:42790900-42791419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 205
               

               
Conread position:
               
349-620
               

               
Cow position:
               
chr18:55075112-55075384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
352-839
               

               
Cow position:
               
chr18:56315824-56316311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
354-708
               

               
Cow position:
               
chr18:51873648-51873999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
361-859
               

               
Cow position:
               
chr18:42744766-42744267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
363-787
               

               
Cow position:
               
chr18:40086981-40086562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
363-860
               

               
Cow position:
               
chr18:51752378-51751884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
369-839
               

               
Cow position:
               
chr18:42837976-42837506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
370-864
               

               
Cow position:
               
chr18:50295150-50295643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
376-841
               

               
Cow position:
               
chr18:50031099-50030635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
380-834
               

               
Cow position:
               
chr18:50271432-50271886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 159
               

               
Conread position:
               
381-866
               

               
Cow position:
               
chr18:55008365-55008847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
327, 191
               

               
Conread position:
               
383-827
               

               
Cow position:
               
chr18:14453314-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
383-860
               

               
Cow position:
               
chr18:50083256-50083733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
383-879
               

               
Cow position:
               
chr18:50245715-50246211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
384-839
               

               
Cow position:
               
chr18:44398464-44398009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 427
               

               
Conread position:
               
385-864
               

               
Cow position:
               
chr18:50049251-50048768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 168
               

               
Conread position:
               
386-867
               

               
Cow position:
               
chr18:55017773-55018253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
387-834
               

               
Cow position:
               
chr18:51970318-51970757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
338, 55
               

               
Conread position:
               
387-839
               

               
Cow position:
               
chr18:14454042-14453590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 392
               

               
Conread position:
               
387-859
               

               
Cow position:
               
chr18:42790858-42791330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
388-859
               

               
Cow position:
               
chr18:42827383-42827854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
404, 388
               

               
Conread position:
               
388-865
               

               
Cow position:
               
chr18:1417813-1418290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 152
               

               
Conread position:
               
390-859
               

               
Cow position:
               
chr18:42960561-42960101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
170, 61
               

               
Conread position:
               
391-612
               

               
Cow position:
               
chr18:40087403-40087182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 115
               

               
Conread position:
               
391-859
               

               
Cow position:
               
chr18:44254073-44253609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 175
               

               
Conread position:
               
391-866
               

               
Cow position:
               
chr18:55008459-55008931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
392-859
               

               
Cow position:
               
chr18:44239740-44240207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
393-865
               

               
Cow position:
               
chr18:33093122-33092650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
397-793
               

               
Cow position:
               
chr18:51970411-51970798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
397-818
               

               
Cow position:
               
chr18:43048740-43048319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 326
               

               
Conread position:
               
400-827
               

               
Cow position:
               
chr18:50848077-50848501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
402-859
               

               
Cow position:
               
chr18:53525685-53526142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
402-870
               

               
Cow position:
               
chr18:54992561-54993029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
403-864
               

               
Cow position:
               
chr18:55067116-55066655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
406-841
               

               
Cow position:
               
chr18:56248239-56247817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 18
               

               
Conread position:
               
418-864
               

               
Cow position:
               
chr18:50098900-50099346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
421-841
               

               
Cow position:
               
chr18:55497694-55497274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
370, 358
               

               
Conread position:
               
433-740
               

               
Cow position:
               
chr18:55075112-55075419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
111, 119
               

               
Conread position:
               
433-785
               

               
Cow position:
               
chr18:53598284-53597938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
433-826
               

               
Cow position:
               
chr18:56267520-56267127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
436-815
               

               
Cow position:
               
chr18:50031123-50030745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
282, 185
               

               
Conread position:
               
442-752
               

               
Cow position:
               
chr18:51873652-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
202, 44
               

               
Conread position:
               
448-834
               

               
Cow position:
               
chr18:44254100-44253718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
169, 180
               

               
Conread position:
               
458-839
               

               
Cow position:
               
chr18:43023106-43022725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 337
               

               
Conread position:
               
460-841
               

               
Cow position:
               
chr18:44154487-44154103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 319
               

               
Conread position:
               
460-859
               

               
Cow position:
               
chr18:42790847-42791246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 95
               

               
Conread position:
               
460-859
               

               
Cow position:
               
chr18:51874030-51874422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 129
               

               
Conread position:
               
461-698
               

               
Cow position:
               
chr18:40087417-40087180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
119, 129
               

               
Conread position:
               
461-841
               

               
Cow position:
               
chr18:42837968-42837588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
466-887
               

               
Cow position:
               
chr18:50271434-50271852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
126, 130
               

               
Conread position:
               
467-848
               

               
Cow position:
               
chr18:52427523-52427903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 344
               

               
Conread position:
               
467-848
               

               
Cow position:
               
chr18:52432872-52433252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 344
               

               
Conread position:
               
471-841
               

               
Cow position:
               
chr18:14454042-14453672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 341
               

               
Conread position:
               
471-859
               

               
Cow position:
               
chr18:44398461-44398073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
471-880
               

               
Cow position:
               
chr18:50245719-50246128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
154, 164
               

               
Conread position:
               
480-841
               

               
Cow position:
               
chr18:43048741-43048380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
486-859
               

               
Cow position:
               
chr18:55523301-55523674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
488-759
               

               
Cow position:
               
chr18:43053464-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-859
               

               
Cow position:
               
chr18:56330185-56329821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
502-873
               

               
Cow position:
               
chr18:50098900-50099270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
287, 298
               

               
Conread position:
               
529-841
               

               
Cow position:
               
chr18:42837984-42837672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
278, 282
               

               
Conread position:
               
532-859
               

               
Cow position:
               
chr18:33065151-33064824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
549-841
               

               
Cow position:
               
chr18:42985588-42985296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
240, 246
               

               
Conread position:
               
554-865
               

               
Cow position:
               
chr18:44398462-44398152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
238, 225
               

               
Conread position:
               
555-841
               

               
Cow position:
               
chr18:14453310-14453024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
237, 224
               

               
Conread position:
               
565-842
               

               
Cow position:
               
chr18:51873689-51873965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
568-864
               

               
Cow position:
               
chr18:56248245-56247956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
275, 23
               

               
Conread position:
               
577-860
               

               
Cow position:
               
chr18:51400280-51400563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
218, 199
               

               
Conread position:
               
579-841
               

               
Cow position:
               
chr18:43053457-43053195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
583-882
               

               
Cow position:
               
chr18:50083288-50083584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
589-846
               

               
Cow position:
               
chr18:53571823-53572078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
635-859
               

               
Cow position:
               
chr18:42985586-42985362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
154, 160
               

               
Conread position:
               
646-841
               

               
Cow position:
               
chr18:49033397-49033202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
145, 129
               

               
Conread position:
               
649-861
               

               
Cow position:
               
chr18:43048740-43048528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.