Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8018F21.3 |
| Conread position: | 1-745 |
| Cow position: | chr2:82799701-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 3-837 |
| Cow position: | chr2:5875173-5874336 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 169 |
| Conread position: | 4-861 |
| Cow position: | chr2:78754926-78755782 (view UCSC Genome Browser custom track) |
| Alignm length: | 868 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 209 |
| Conread position: | 5-830 |
| Cow position: | chr2:82799621-82800449 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 5-860 |
| Cow position: | chr2:82799537-82800395 (view UCSC Genome Browser custom track) |
| Alignm length: | 861 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 225 |
| Conread position: | 8-841 |
| Cow position: | chr2:78754360-78755178 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 8-841 |
| Cow position: | chr2:78754442-78755262 (view UCSC Genome Browser custom track) |
| Alignm length: | 839 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 205 |
| Conread position: | 9-834 |
| Cow position: | chr2:78755601-78756424 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 66 |
| Conread position: | 10-859 |
| Cow position: | chr2:78755435-78756285 (view UCSC Genome Browser custom track) |
| Alignm length: | 861 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 78 |
| Conread position: | 14-780 |
| Cow position: | chr2:86465454-86466221 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 129 |
| Conread position: | 49-692 |
| Cow position: | chr2:5874791-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 390 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 124 |
| Conread position: | 49-786 |
| Cow position: | chr2:86465153-86465893 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 100 |
| Conread position: | 49-841 |
| Cow position: | chr2:86465405-86466200 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 123 |
| Conread position: | 49-864 |
| Cow position: | chr2:78755307-78756121 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 60-394 |
| Cow position: | chr2:48689392-48689055 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 104, 154 |
| Conread position: | 70-839 |
| Cow position: | chr2:86465006-86465778 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 301 |
| Conread position: | 70-859 |
| Cow position: | chr2:78754824-78755614 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 226 |
| Conread position: | 81-584 |
| Cow position: | chr2:48689539-48689033 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 93 |
| Conread position: | 96-858 |
| Cow position: | chr2:78754364-78755111 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 101-834 |
| Cow position: | chr2:86465121-86465857 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 103-858 |
| Cow position: | chr2:82799467-82800225 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 257 |
| Conread position: | 160-859 |
| Cow position: | chr2:5875180-5874482 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 423 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 168-780 |
| Cow position: | chr2:78754106-78754712 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 222-626 |
| Cow position: | chr2:48689478-48689075 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 63 |
| Conread position: | 222-834 |
| Cow position: | chr2:78754811-78755422 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 309-839 |
| Cow position: | chr2:78754160-78754688 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 329-865 |
| Cow position: | chr2:78754099-78754629 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 334 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 213, 72 |
| Conread position: | 330-826 |
| Cow position: | chr2:48689538-48689043 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 338-866 |
| Cow position: | chr2:86465109-86465636 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 343-859 |
| Cow position: | chr2:82799458-82799974 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 450, 442 |
| Conread position: | 465-844 |
| Cow position: | chr2:78754067-78754443 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 510-841 |
| Cow position: | chr2:82799457-82799788 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 185, 203 |
| Conread position: | 542-859 |
| Cow position: | chr2:86464977-86465294 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 172, 163 |
| Conread position: | 573-841 |
| Cow position: | chr2:48689549-48689280 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 156 |
Show alignments to all cow chromosomes.