Cow genome map

Conread name: Ss1.1-Pig4-TMW8018F21.3

Conread position: 1-371
Cow position: chr24:17077835-17077463 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 228
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 160, 172

Conread position: 1-496
Cow position: chr24:17070549-17071047 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 172

Conread position: 1-839
Cow position: chr24:17036372-17035531 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 172

Conread position: 4-350
Cow position: chr24:17013173-17013521 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 219
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 157, 223

Conread position: 5-414
Cow position: chr24:17077915-17077503 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 265
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 156, 0

Conread position: 5-749
Cow position: chr24:17035696-17034949 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 5-859
Cow position: chr24:17036116-17035259 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 782

Conread position: 5-865
Cow position: chr24:17035948-17035087 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 168

Conread position: 6-540
Cow position: chr24:17077998-17077462 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 301

Conread position: 9-840
Cow position: chr24:17035860-17035026 (view UCSC Genome Browser custom track)
Alignm length: 839
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 163

Conread position: 15-418
Cow position: chr24:17070647-17071053 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 202

Conread position: 15-612
Cow position: chr24:17035437-17034843 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 376
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 493

Conread position: 31-834
Cow position: chr24:17078309-17077503 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 43-829
Cow position: chr24:17035742-17034953 (view UCSC Genome Browser custom track)
Alignm length: 793
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 674

Conread position: 43-841
Cow position: chr24:17036498-17035697 (view UCSC Genome Browser custom track)
Alignm length: 802
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 43-865
Cow position: chr24:17036414-17035589 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 57-656
Cow position: chr24:17070437-17071039 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 57-833
Cow position: chr24:17036148-17035369 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 728

Conread position: 67-857
Cow position: chr24:17078357-17077564 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 275

Conread position: 116-763
Cow position: chr24:17070412-17071062 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 142-841
Cow position: chr24:17036564-17035865 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 160-827
Cow position: chr24:17070376-17071042 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 7

Conread position: 181-522
Cow position: chr24:17013185-17013525 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 322, 0

Conread position: 205-859
Cow position: chr24:17036582-17035931 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 587, 23

Conread position: 211-839
Cow position: chr24:17078294-17077666 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 583, 567

Conread position: 224-864
Cow position: chr24:17078365-17077725 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 64

Conread position: 243-586
Cow position: chr24:17013165-17013506 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 19

Conread position: 265-469
Cow position: chr24:16986451-16986655 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 105

Conread position: 316-858
Cow position: chr24:17070447-17070989 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 340-864
Cow position: chr24:17070387-17070911 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 27

Conread position: 341-546
Cow position: chr24:16986443-16986648 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 343-690
Cow position: chr24:17013179-17013525 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 0

Conread position: 343-864
Cow position: chr24:17036612-17036094 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 397-754
Cow position: chr24:17013149-17013506 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 150

Conread position: 407-630
Cow position: chr24:16986425-16986648 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 491-721
Cow position: chr24:16986425-16986655 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 495-833
Cow position: chr24:17013165-17013501 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 525-841
Cow position: chr24:17078400-17078084 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 559-841
Cow position: chr24:17070353-17070636 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 563-866
Cow position: chr24:17013147-17013449 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 298, 0

Conread position: 578-808
Cow position: chr24:16986428-16986658 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 136, 128

Show alignments to all cow chromosomes.