Cow genome map
Conread name: | Ss1.1-Pig4-TMW8018F21.3 |
Conread position: | 1-371 |
Cow position: | chr24:17077835-17077463 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 228 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 160, 172 |
Conread position: | 1-496 |
Cow position: | chr24:17070549-17071047 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 172 |
Conread position: | 1-839 |
Cow position: | chr24:17036372-17035531 (view UCSC Genome Browser custom track) |
Alignm length: | 844 |
Alignm identity: | 579 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 172 |
Conread position: | 4-350 |
Cow position: | chr24:17013173-17013521 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 219 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 157, 223 |
Conread position: | 5-414 |
Cow position: | chr24:17077915-17077503 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 265 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 5-749 |
Cow position: | chr24:17035696-17034949 (view UCSC Genome Browser custom track) |
Alignm length: | 748 |
Alignm identity: | 476 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 5-859 |
Cow position: | chr24:17036116-17035259 (view UCSC Genome Browser custom track) |
Alignm length: | 859 |
Alignm identity: | 571 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 782 |
Conread position: | 5-865 |
Cow position: | chr24:17035948-17035087 (view UCSC Genome Browser custom track) |
Alignm length: | 866 |
Alignm identity: | 576 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 168 |
Conread position: | 6-540 |
Cow position: | chr24:17077998-17077462 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 301 |
Conread position: | 9-840 |
Cow position: | chr24:17035860-17035026 (view UCSC Genome Browser custom track) |
Alignm length: | 839 |
Alignm identity: | 557 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 163 |
Conread position: | 15-418 |
Cow position: | chr24:17070647-17071053 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 202 |
Conread position: | 15-612 |
Cow position: | chr24:17035437-17034843 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 376 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 13, 493 |
Conread position: | 31-834 |
Cow position: | chr24:17078309-17077503 (view UCSC Genome Browser custom track) |
Alignm length: | 807 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 0 |
Conread position: | 43-829 |
Cow position: | chr24:17035742-17034953 (view UCSC Genome Browser custom track) |
Alignm length: | 793 |
Alignm identity: | 527 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 674 |
Conread position: | 43-841 |
Cow position: | chr24:17036498-17035697 (view UCSC Genome Browser custom track) |
Alignm length: | 802 |
Alignm identity: | 539 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 43-865 |
Cow position: | chr24:17036414-17035589 (view UCSC Genome Browser custom track) |
Alignm length: | 826 |
Alignm identity: | 563 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 57-656 |
Cow position: | chr24:17070437-17071039 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 57-833 |
Cow position: | chr24:17036148-17035369 (view UCSC Genome Browser custom track) |
Alignm length: | 781 |
Alignm identity: | 532 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 728 |
Conread position: | 67-857 |
Cow position: | chr24:17078357-17077564 (view UCSC Genome Browser custom track) |
Alignm length: | 797 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 275 |
Conread position: | 116-763 |
Cow position: | chr24:17070412-17071062 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 142-841 |
Cow position: | chr24:17036564-17035865 (view UCSC Genome Browser custom track) |
Alignm length: | 701 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 27 |
Conread position: | 160-827 |
Cow position: | chr24:17070376-17071042 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 7 |
Conread position: | 181-522 |
Cow position: | chr24:17013185-17013525 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 229 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 322, 0 |
Conread position: | 205-859 |
Cow position: | chr24:17036582-17035931 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 587, 23 |
Conread position: | 211-839 |
Cow position: | chr24:17078294-17077666 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 583, 567 |
Conread position: | 224-864 |
Cow position: | chr24:17078365-17077725 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 64 |
Conread position: | 243-586 |
Cow position: | chr24:17013165-17013506 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 19 |
Conread position: | 265-469 |
Cow position: | chr24:16986451-16986655 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 137 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 113, 105 |
Conread position: | 316-858 |
Cow position: | chr24:17070447-17070989 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 340-864 |
Cow position: | chr24:17070387-17070911 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 27 |
Conread position: | 341-546 |
Cow position: | chr24:16986443-16986648 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 147 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 343-690 |
Cow position: | chr24:17013179-17013525 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 317, 0 |
Conread position: | 343-864 |
Cow position: | chr24:17036612-17036094 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 30 |
Conread position: | 397-754 |
Cow position: | chr24:17013149-17013506 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 150 |
Conread position: | 407-630 |
Cow position: | chr24:16986425-16986648 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 491-721 |
Cow position: | chr24:16986425-16986655 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 158 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 495-833 |
Cow position: | chr24:17013165-17013501 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 525-841 |
Cow position: | chr24:17078400-17078084 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 164 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 559-841 |
Cow position: | chr24:17070353-17070636 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 175 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 563-866 |
Cow position: | chr24:17013147-17013449 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 198 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 298, 0 |
Conread position: | 578-808 |
Cow position: | chr24:16986428-16986658 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 154 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 136, 128 |
Show alignments to all cow chromosomes.