Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8018F21.3 |
| Conread position: | 1-328 |
| Cow position: | chr25:33127892-33128222 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 159, 210 |
| Conread position: | 1-404 |
| Cow position: | chr25:23420473-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 1-450 |
| Cow position: | chr25:33305313-33304866 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 292 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 159, 196 |
| Conread position: | 1-696 |
| Cow position: | chr25:33157467-33156770 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 1-827 |
| Cow position: | chr25:34433611-34434426 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 148 |
| Conread position: | 1-833 |
| Cow position: | chr25:34447028-34447854 (view UCSC Genome Browser custom track) |
| Alignm length: | 839 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 1-863 |
| Cow position: | chr25:34732602-34731738 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 171 |
| Conread position: | 2-802 |
| Cow position: | chr25:34446945-34447746 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 170 |
| Conread position: | 4-497 |
| Cow position: | chr25:33127727-33128223 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 170 |
| Conread position: | 4-754 |
| Cow position: | chr25:326506-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 91 |
| Conread position: | 5-249 |
| Cow position: | chr25:33145192-33145439 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 158, 221 |
| Conread position: | 5-480 |
| Cow position: | chr25:34714044-34714522 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 290 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 156, 208 |
| Conread position: | 5-488 |
| Cow position: | chr25:23420393-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 132 |
| Conread position: | 5-672 |
| Cow position: | chr25:34769862-34769192 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 5-673 |
| Cow position: | chr25:326591-327268 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 113 |
| Conread position: | 5-752 |
| Cow position: | chr25:36801229-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 108 |
| Conread position: | 5-806 |
| Cow position: | chr25:33299077-33299876 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 5-839 |
| Cow position: | chr25:36800809-36801634 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 208 |
| Conread position: | 5-841 |
| Cow position: | chr25:33298573-33299412 (view UCSC Genome Browser custom track) |
| Alignm length: | 844 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 167 |
| Conread position: | 7-826 |
| Cow position: | chr25:33298995-33299817 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 7-865 |
| Cow position: | chr25:34770112-34769252 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 600 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 136 |
| Conread position: | 7-900 |
| Cow position: | chr25:36801063-36801947 (view UCSC Genome Browser custom track) |
| Alignm length: | 900 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 43 |
| Conread position: | 8-785 |
| Cow position: | chr25:36800644-36801412 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 164 |
| Conread position: | 9-837 |
| Cow position: | chr25:34770026-34769195 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 777 |
| Conread position: | 10-826 |
| Cow position: | chr25:36801150-36801957 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 166 |
| Conread position: | 10-841 |
| Cow position: | chr25:25652203-25653037 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 162 |
| Conread position: | 10-860 |
| Cow position: | chr25:33306283-33305437 (view UCSC Genome Browser custom track) |
| Alignm length: | 865 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 95 |
| Conread position: | 14-806 |
| Cow position: | chr25:34446873-34447668 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 14-900 |
| Cow position: | chr25:33298918-33299807 (view UCSC Genome Browser custom track) |
| Alignm length: | 892 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 199 |
| Conread position: | 19-865 |
| Cow position: | chr25:326353-327208 (view UCSC Genome Browser custom track) |
| Alignm length: | 861 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 176 |
| Conread position: | 49-572 |
| Cow position: | chr25:23420353-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 49-582 |
| Cow position: | chr25:33144903-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 108 |
| Conread position: | 49-668 |
| Cow position: | chr25:34447244-34447857 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 164 |
| Conread position: | 49-779 |
| Cow position: | chr25:25652578-25653311 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 425 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 111, 123 |
| Conread position: | 49-781 |
| Cow position: | chr25:33157503-33156769 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 49-785 |
| Cow position: | chr25:25652494-25653233 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 123 |
| Conread position: | 49-826 |
| Cow position: | chr25:34762967-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 154 |
| Conread position: | 49-864 |
| Cow position: | chr25:33298869-33299687 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 167 |
| Conread position: | 58-394 |
| Cow position: | chr25:22235976-22236315 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 103, 251 |
| Conread position: | 58-631 |
| Cow position: | chr25:33305421-33304853 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 17 |
| Conread position: | 62-595 |
| Cow position: | chr25:33127702-33128237 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 69-875 |
| Cow position: | chr25:33298469-33299280 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 150 |
| Conread position: | 70-841 |
| Cow position: | chr25:25652347-25653121 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 102 |
| Conread position: | 71-695 |
| Cow position: | chr25:33306055-33305434 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 71-859 |
| Cow position: | chr25:36800539-36801330 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 101 |
| Conread position: | 72-785 |
| Cow position: | chr25:33306796-33306098 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 435 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 74-834 |
| Cow position: | chr25:326491-327261 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 99 |
| Conread position: | 76-666 |
| Cow position: | chr25:33144846-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 97 |
| Conread position: | 79-790 |
| Cow position: | chr25:34433524-34434219 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 80-860 |
| Cow position: | chr25:34770123-34769340 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 85-841 |
| Cow position: | chr25:34713703-34714463 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 140 |
| Conread position: | 94-779 |
| Cow position: | chr25:36800646-36801334 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 79 |
| Conread position: | 103-542 |
| Cow position: | chr25:414751-414317 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 280, 57 |
| Conread position: | 103-740 |
| Cow position: | chr25:34713890-34714530 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 130-611 |
| Cow position: | chr25:18642204-18641708 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 252 |
| Conread position: | 142-837 |
| Cow position: | chr25:34713845-34714540 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 160-483 |
| Cow position: | chr25:366726-367048 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 169-573 |
| Cow position: | chr25:346457-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 93, 100 |
| Conread position: | 177-740 |
| Cow position: | chr25:23420316-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 546, 551 |
| Conread position: | 180-785 |
| Cow position: | chr25:33306442-33305843 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 379 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 146, 98 |
| Conread position: | 181-656 |
| Cow position: | chr25:33127739-33128214 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-626 |
| Cow position: | chr25:414753-414317 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 109, 56 |
| Conread position: | 202-864 |
| Cow position: | chr25:34770166-34769504 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 205-841 |
| Cow position: | chr25:34762958-34763588 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 207-832 |
| Cow position: | chr25:34446985-34447610 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 513, 509 |
| Conread position: | 220-779 |
| Cow position: | chr25:33305986-33305434 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 220-878 |
| Cow position: | chr25:36800607-36801265 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 577, 559 |
| Conread position: | 222-670 |
| Cow position: | chr25:22235891-22236339 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 285 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 80, 64 |
| Conread position: | 223-859 |
| Cow position: | chr25:33157494-33156858 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 498, 503 |
| Conread position: | 223-871 |
| Cow position: | chr25:33305421-33304787 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 223-872 |
| Cow position: | chr25:33157410-33156762 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 627, 0 |
| Conread position: | 225-841 |
| Cow position: | chr25:34762810-34763423 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 265 |
| Conread position: | 227-830 |
| Cow position: | chr25:34433003-34433606 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 387 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 81, 75 |
| Conread position: | 233-859 |
| Cow position: | chr25:34446927-34447553 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 559, 546 |
| Conread position: | 235-827 |
| Cow position: | chr25:3664006-3664598 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 129 |
| Conread position: | 241-834 |
| Cow position: | chr25:33144846-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 166 |
| Conread position: | 241-865 |
| Cow position: | chr25:34732611-34731987 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 133 |
| Conread position: | 243-568 |
| Cow position: | chr25:366724-367049 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 243-656 |
| Cow position: | chr25:346447-346860 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 118, 134 |
| Conread position: | 250-703 |
| Cow position: | chr25:22235835-22236288 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 308, 300 |
| Conread position: | 251-785 |
| Cow position: | chr25:3663938-3664472 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 257-862 |
| Cow position: | chr25:33157544-33156939 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 261-824 |
| Cow position: | chr25:23420316-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 264-757 |
| Cow position: | chr25:33127738-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 271-839 |
| Cow position: | chr25:33127661-33128230 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 304-628 |
| Cow position: | chr25:414798-414480 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 130, 48 |
| Conread position: | 316-787 |
| Cow position: | chr25:34433008-34433497 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 311 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 218, 365 |
| Conread position: | 316-844 |
| Cow position: | chr25:34433512-34434033 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 317-596 |
| Cow position: | chr25:36844631-36844352 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 318-859 |
| Cow position: | chr25:23420054-23420578 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 346 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 251, 21 |
| Conread position: | 322-839 |
| Cow position: | chr25:34732614-34732097 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 397 |
| Conread position: | 323-682 |
| Cow position: | chr25:346443-346802 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 191, 197 |
| Conread position: | 325-785 |
| Cow position: | chr25:36800462-36800920 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 5 |
| Conread position: | 326-864 |
| Cow position: | chr25:23420228-23420751 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 48 |
| Conread position: | 330-825 |
| Cow position: | chr25:22235831-22236326 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 331-660 |
| Cow position: | chr25:366728-367057 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 183, 190 |
| Conread position: | 331-841 |
| Cow position: | chr25:25652191-25652701 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 456, 472 |
| Conread position: | 332-789 |
| Cow position: | chr25:34732100-34731645 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 343-841 |
| Cow position: | chr25:33144864-33145359 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 87 |
| Conread position: | 346-656 |
| Cow position: | chr25:18641406-18641107 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 347-864 |
| Cow position: | chr25:34713801-34714318 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 105, 115 |
| Conread position: | 351-864 |
| Cow position: | chr25:326352-326865 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 318 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 91, 122 |
| Conread position: | 358-828 |
| Cow position: | chr25:23420329-23420799 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 183 |
| Conread position: | 363-859 |
| Cow position: | chr25:34446889-34447385 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 382-610 |
| Cow position: | chr25:30534776-30535002 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 382-707 |
| Cow position: | chr25:18642201-18641873 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 385-827 |
| Cow position: | chr25:34433497-34433935 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 82 |
| Conread position: | 395-786 |
| Cow position: | chr25:34732624-34732234 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 395-825 |
| Cow position: | chr25:346433-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 13 |
| Conread position: | 402-859 |
| Cow position: | chr25:33127708-33128165 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 373 |
| Conread position: | 408-865 |
| Cow position: | chr25:36800381-36800832 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 409-859 |
| Cow position: | chr25:33144846-33145293 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 192 |
| Conread position: | 411-741 |
| Cow position: | chr25:366724-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 193 |
| Conread position: | 412-644 |
| Cow position: | chr25:34433020-34433252 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 206, 228 |
| Conread position: | 412-788 |
| Cow position: | chr25:22235829-22236205 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 310, 293 |
| Conread position: | 412-857 |
| Cow position: | chr25:25652188-25652633 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 297, 307 |
| Conread position: | 413-656 |
| Cow position: | chr25:427330-427573 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 129, 137 |
| Conread position: | 423-703 |
| Cow position: | chr25:414763-414489 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 428-861 |
| Cow position: | chr25:34713714-34714147 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 439-864 |
| Cow position: | chr25:33127661-33128086 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 46 |
| Conread position: | 454-776 |
| Cow position: | chr25:18642213-18641888 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 144, 260 |
| Conread position: | 464-839 |
| Cow position: | chr25:34433492-34433864 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 279, 113 |
| Conread position: | 465-700 |
| Cow position: | chr25:34432989-34433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 475-812 |
| Cow position: | chr25:366704-367041 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 207, 213 |
| Conread position: | 479-839 |
| Cow position: | chr25:346431-346791 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 209 |
| Conread position: | 490-864 |
| Cow position: | chr25:34732614-34732240 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 349, 363 |
| Conread position: | 496-840 |
| Cow position: | chr25:414774-414438 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 218, 22 |
| Conread position: | 496-865 |
| Cow position: | chr25:22235829-22236197 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 310, 303 |
| Conread position: | 516-839 |
| Cow position: | chr25:34446874-34447197 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 46, 54 |
| Conread position: | 517-735 |
| Cow position: | chr25:18641403-18641191 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 106 |
| Conread position: | 563-789 |
| Cow position: | chr25:34433003-34433229 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 573-859 |
| Cow position: | chr25:34732615-34732329 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 152, 137 |
| Conread position: | 579-865 |
| Cow position: | chr25:366724-367010 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 263, 274 |
| Conread position: | 601-841 |
| Cow position: | chr25:346469-346709 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 112 |
| Conread position: | 665-846 |
| Cow position: | chr25:34433021-34433202 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 63, 57 |
Show alignments to all cow chromosomes.