Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8018F21.3
        

               Conread position:
               1-281
               

               Cow position:
               chr27:21615681-21615398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               160, 117
               

               Conread position:
               2-611
               

               Cow position:
               chr27:21616015-21615405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 69
               

               Conread position:
               2-841
               

               Cow position:
               chr27:21616273-21615427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               856
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 117
               

               Conread position:
               54-567
               

               Cow position:
               chr27:21615796-21615283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               107, 119
               

               Conread position:
               222-786
               

               Cow position:
               chr27:21615960-21615398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-859
               

               Cow position:
               chr27:21616218-21615576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 66
               

               Conread position:
               234-859
               

               Cow position:
               chr27:21616290-21615660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               634
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 197
               

               Conread position:
               270-846
               

               Cow position:
               chr27:21616088-21615506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 140
               

               Conread position:
               395-834
               

               Cow position:
               chr27:21616298-21615853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               6, 206
               
Show alignments to all cow chromosomes.