Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8018F21.3
        

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               160, 171
               

               Conread position:
               1-540
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               329
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               160, 24
               

               Conread position:
               1-707
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 217
               

               Conread position:
               1-825
               

               Cow position:
               
               

               Alignm length:
               838
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               1-858
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               2-832
               

               Cow position:
               
               

               Alignm length:
               837
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 86
               

               Conread position:
               5-740
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 90
               

               Conread position:
               5-747
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 154
               

               Conread position:
               5-866
               

               Cow position:
               
               

               Alignm length:
               872
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               5-886
               

               Cow position:
               
               

               Alignm length:
               889
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 208
               

               Conread position:
               7-528
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               317
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               153, 165
               

               Conread position:
               7-703
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 113
               

               Conread position:
               8-826
               

               Cow position:
               
               

               Alignm length:
               827
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 164
               

               Conread position:
               8-834
               

               Cow position:
               
               

               Alignm length:
               830
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 67
               

               Conread position:
               8-841
               

               Cow position:
               
               

               Alignm length:
               842
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 87
               

               Conread position:
               10-859
               

               Cow position:
               
               

               Alignm length:
               858
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               15-644
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 198
               

               Conread position:
               25-622
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 8
               

               Conread position:
               43-453
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               150, 122
               

               Conread position:
               43-753
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               48-859
               

               Cow position:
               
               

               Alignm length:
               820
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 72
               

               Conread position:
               49-612
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               360
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               112, 123
               

               Conread position:
               49-697
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               391
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               114, 331
               

               Conread position:
               52-841
               

               Cow position:
               
               

               Alignm length:
               798
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 153
               

               Conread position:
               57-702
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 57
               

               Conread position:
               58-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               105, 248
               

               Conread position:
               58-632
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 115
               

               Conread position:
               58-794
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 114
               

               Conread position:
               70-347
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               90, 102
               

               Conread position:
               73-780
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 47
               

               Conread position:
               98-866
               

               Cow position:
               
               

               Alignm length:
               775
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 115
               

               Conread position:
               99-767
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 73
               

               Conread position:
               100-626
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               325
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               133-757
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               141-859
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 72
               

               Conread position:
               146-828
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               152-900
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               162-588
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               271
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               194, 7
               

               Conread position:
               168-707
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               172-874
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               688, 0
               

               Conread position:
               180-841
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               213-721
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               327
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               263, 36
               

               Conread position:
               223-841
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 146
               

               Conread position:
               234-827
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 59
               

               Conread position:
               239-630
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 218
               

               Conread position:
               242-785
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               335
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               46, 66
               

               Conread position:
               244-785
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 69
               

               Conread position:
               259-841
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               319-867
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               503, 496
               

               Conread position:
               330-729
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 74
               

               Conread position:
               334-864
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 117
               

               Conread position:
               337-841
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               314
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               117, 131
               

               Conread position:
               339-864
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               334
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               165, 149
               

               Conread position:
               347-865
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               446, 254
               

               Conread position:
               359-859
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               310
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               267, 204
               

               Conread position:
               391-864
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               464, 457
               

               Conread position:
               392-841
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               262, 239
               

               Conread position:
               408-785
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 16
               

               Conread position:
               408-847
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 406
               

               Conread position:
               410-790
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               127, 139
               

               Conread position:
               472-804
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               230, 235
               

               Conread position:
               474-860
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               476-846
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               264, 256
               

               Conread position:
               551-827
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               162, 41
               

               Conread position:
               580-859
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               219, 228
               

               Conread position:
               635-834
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 0
               
Show alignments to all cow chromosomes.