Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8018F21.3 |
| Conread position: | 1-841 |
| Cow position: | chr6:49340578-49341421 (view UCSC Genome Browser custom track) |
| Alignm length: | 849 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 142 |
| Conread position: | 7-704 |
| Cow position: | chr6:49396305-49397010 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 171 |
| Conread position: | 8-859 |
| Cow position: | chr6:49340417-49341271 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 303 |
| Conread position: | 58-552 |
| Cow position: | chr6:49429047-49429542 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 305 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 103, 114 |
| Conread position: | 58-686 |
| Cow position: | chr6:49362246-49362853 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 391 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 65 |
| Conread position: | 58-776 |
| Cow position: | chr6:49428795-49429514 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 114 |
| Conread position: | 58-779 |
| Cow position: | chr6:49396272-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 58-832 |
| Cow position: | chr6:49428711-49429488 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 114 |
| Conread position: | 58-841 |
| Cow position: | chr6:49428459-49429245 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 461 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 103, 114 |
| Conread position: | 67-875 |
| Cow position: | chr6:49396119-49396922 (view UCSC Genome Browser custom track) |
| Alignm length: | 812 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 117 |
| Conread position: | 70-804 |
| Cow position: | chr6:49340731-49341466 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 122 |
| Conread position: | 70-864 |
| Cow position: | chr6:49340395-49341192 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 103 |
| Conread position: | 102-829 |
| Cow position: | chr6:49396232-49396962 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 71 |
| Conread position: | 182-866 |
| Cow position: | chr6:49340345-49341025 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 189-846 |
| Cow position: | chr6:49395908-49396559 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 112 |
| Conread position: | 229-877 |
| Cow position: | chr6:49395864-49396504 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 79 |
| Conread position: | 241-800 |
| Cow position: | chr6:49362096-49362645 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 310-859 |
| Cow position: | chr6:49395777-49396320 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 335 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 250, 243 |
| Conread position: | 331-839 |
| Cow position: | chr6:49395717-49396222 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 308 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 103, 29 |
| Conread position: | 396-859 |
| Cow position: | chr6:49340148-49340599 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 403-860 |
| Cow position: | chr6:49362330-49362775 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 426-841 |
| Cow position: | chr6:49428242-49428657 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 132, 124 |
Show alignments to all cow chromosomes.