Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8018F21.3 |
| Conread position: | 1-404 |
| Cow position: | chr8:6957990-6957587 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 160, 203 |
| Conread position: | 1-812 |
| Cow position: | chr8:45201192-45202006 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 212 |
| Conread position: | 1-827 |
| Cow position: | chr8:48407288-48406459 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 138 |
| Conread position: | 1-859 |
| Cow position: | chr8:46815967-46816828 (view UCSC Genome Browser custom track) |
| Alignm length: | 865 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 212 |
| Conread position: | 1-859 |
| Cow position: | chr8:46816219-46817080 (view UCSC Genome Browser custom track) |
| Alignm length: | 866 |
| Alignm identity: | 587 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 1-860 |
| Cow position: | chr8:48407120-48406258 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 3-837 |
| Cow position: | chr8:48407622-48406785 (view UCSC Genome Browser custom track) |
| Alignm length: | 841 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 719 |
| Conread position: | 5-523 |
| Cow position: | chr8:55581252-55581773 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 156, 222 |
| Conread position: | 5-619 |
| Cow position: | chr8:55581084-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 5-818 |
| Cow position: | chr8:45201112-45201928 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 291 |
| Conread position: | 5-833 |
| Cow position: | chr8:46816559-46817390 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 168 |
| Conread position: | 5-865 |
| Cow position: | chr8:46816475-46817337 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 587 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 208 |
| Conread position: | 5-866 |
| Cow position: | chr8:46815884-46816750 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 211 |
| Conread position: | 7-749 |
| Cow position: | chr8:55581002-55581747 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 8-815 |
| Cow position: | chr8:48407533-48406723 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 8-846 |
| Cow position: | chr8:45201031-45201872 (view UCSC Genome Browser custom track) |
| Alignm length: | 844 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 165 |
| Conread position: | 8-864 |
| Cow position: | chr8:46816058-46816917 (view UCSC Genome Browser custom track) |
| Alignm length: | 865 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 165 |
| Conread position: | 10-833 |
| Cow position: | chr8:55580921-55581747 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 10-862 |
| Cow position: | chr8:45200949-45201807 (view UCSC Genome Browser custom track) |
| Alignm length: | 863 |
| Alignm identity: | 584 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 16-859 |
| Cow position: | chr8:46816318-46817164 (view UCSC Genome Browser custom track) |
| Alignm length: | 850 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 197 |
| Conread position: | 57-841 |
| Cow position: | chr8:48407316-48406529 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 115 |
| Conread position: | 62-860 |
| Cow position: | chr8:55580889-55581690 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 774 |
| Conread position: | 73-841 |
| Cow position: | chr8:55580816-55581587 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 79-864 |
| Cow position: | chr8:55580737-55581526 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 308 |
| Conread position: | 142-865 |
| Cow position: | chr8:45200913-45201639 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 265-741 |
| Cow position: | chr8:6958059-6957586 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 265-839 |
| Cow position: | chr8:48407609-48407035 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 454, 442 |
| Conread position: | 272-789 |
| Cow position: | chr8:45200793-45201310 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 221 |
| Conread position: | 292-859 |
| Cow position: | chr8:46815679-46816240 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 320-848 |
| Cow position: | chr8:48407638-48407111 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 515, 0 |
| Conread position: | 348-859 |
| Cow position: | chr8:46815651-46816156 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 312, 134 |
| Conread position: | 349-788 |
| Cow position: | chr8:6958059-6957620 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 280 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 342, 272 |
| Conread position: | 364-864 |
| Cow position: | chr8:45200802-45201302 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 384-841 |
| Cow position: | chr8:48407658-48407201 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 90 |
| Conread position: | 433-786 |
| Cow position: | chr8:6958059-6957707 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 288 |
| Conread position: | 433-866 |
| Cow position: | chr8:45200787-45201219 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 282 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 122, 91 |
| Conread position: | 479-859 |
| Cow position: | chr8:48407647-48407267 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 47 |
| Conread position: | 517-861 |
| Cow position: | chr8:6958059-6957715 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 276, 288 |
| Conread position: | 601-846 |
| Cow position: | chr8:6958059-6957814 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.