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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8018I16.3
        

               
Conread position:
               
72-514
               

               
Cow position:
               
chr17:10249709-10250163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
80-351
               

               
Cow position:
               
chr17:24946994-24946723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 245
               

               
Conread position:
               
81-345
               

               
Cow position:
               
chr17:15301952-15301689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
92-595
               

               
Cow position:
               
chr17:26764589-26765090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
96-449
               

               
Cow position:
               
chr17:6843733-6844102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
97-232
               

               
Cow position:
               
chr17:907926-908062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
99-514
               

               
Cow position:
               
chr17:6263490-6263905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 15
               

               
Conread position:
               
99-520
               

               
Cow position:
               
chr17:7560095-7559671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
206, 33
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr17:20808111-20808324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
101-514
               

               
Cow position:
               
chr17:6123416-6123831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 310
               

               
Conread position:
               
101-587
               

               
Cow position:
               
chr17:29715605-29715136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 205
               

               
Conread position:
               
102-303
               

               
Cow position:
               
chr17:24608400-24608609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
102-408
               

               
Cow position:
               
chr17:40802396-40802702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 20
               

               
Conread position:
               
102-413
               

               
Cow position:
               
chr17:10285243-10284920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 231
               

               
Conread position:
               
102-469
               

               
Cow position:
               
chr17:241919-242298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 198
               

               
Conread position:
               
102-520
               

               
Cow position:
               
chr17:29292791-29292368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
102-521
               

               
Cow position:
               
chr17:27667609-27667188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 14
               

               
Conread position:
               
102-538
               

               
Cow position:
               
chr17:35184617-35185057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
102-583
               

               
Cow position:
               
chr17:5733848-5733410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
226, 5
               

               
Conread position:
               
102-586
               

               
Cow position:
               
chr17:15188491-15188013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
102-595
               

               
Cow position:
               
chr17:5767486-5767979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 14
               

               
Conread position:
               
102-595
               

               
Cow position:
               
chr17:29157014-29157491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
102-595
               

               
Cow position:
               
chr17:32138811-32138352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 14
               

               
Conread position:
               
103-413
               

               
Cow position:
               
chr17:27324250-27323931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
103-533
               

               
Cow position:
               
chr17:5745679-5745242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 307
               

               
Conread position:
               
104-281
               

               
Cow position:
               
chr17:36550369-36550189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
105-301
               

               
Cow position:
               
chr17:15722219-15722417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
105-413
               

               
Cow position:
               
chr17:17240378-17240057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 84
               

               
Conread position:
               
105-444
               

               
Cow position:
               
chr17:20507955-20507618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
62, 147
               

               
Conread position:
               
106-293
               

               
Cow position:
               
chr17:24313290-24313483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
106-470
               

               
Cow position:
               
chr17:43992122-43992484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 305
               

               
Conread position:
               
107-277
               

               
Cow position:
               
chr17:37415278-37415111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
107-300
               

               
Cow position:
               
chr17:24031436-24031628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
107-303
               

               
Cow position:
               
chr17:4063964-4064161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
107-409
               

               
Cow position:
               
chr17:18036384-18036097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
217, 68
               

               
Conread position:
               
107-417
               

               
Cow position:
               
chr17:21807221-21806901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 181
               

               
Conread position:
               
107-422
               

               
Cow position:
               
chr17:40701259-40701575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 0
               

               
Conread position:
               
107-467
               

               
Cow position:
               
chr17:10512300-10511941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
107-511
               

               
Cow position:
               
chr17:14231963-14231564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
107-518
               

               
Cow position:
               
chr17:11382127-11381721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 85
               

               
Conread position:
               
107-520
               

               
Cow position:
               
chr17:15984941-15985348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
107-527
               

               
Cow position:
               
chr17:14034059-14033635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 301
               

               
Conread position:
               
107-579
               

               
Cow position:
               
chr17:5246470-5246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
107-585
               

               
Cow position:
               
chr17:13966865-13966390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 264
               

               
Conread position:
               
107-590
               

               
Cow position:
               
chr17:21960094-21959623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
108-313
               

               
Cow position:
               
chr17:32280287-32280077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
108-325
               

               
Cow position:
               
chr17:8138816-8139033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
108-346
               

               
Cow position:
               
chr17:30410829-30410591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
108-371
               

               
Cow position:
               
chr17:7615058-7614796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
108-413
               

               
Cow position:
               
chr17:20855269-20855575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
197, 291
               

               
Conread position:
               
108-422
               

               
Cow position:
               
chr17:11913111-11912797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 291
               

               
Conread position:
               
108-449
               

               
Cow position:
               
chr17:18554013-18553680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
108-450
               

               
Cow position:
               
chr17:14249445-14249083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
108-450
               

               
Cow position:
               
chr17:24983754-24983424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
108-510
               

               
Cow position:
               
chr17:19266817-19266417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 293
               

               
Conread position:
               
108-514
               

               
Cow position:
               
chr17:34235610-34235202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 263
               

               
Conread position:
               
108-564
               

               
Cow position:
               
chr17:10529155-10528689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 300
               

               
Conread position:
               
108-569
               

               
Cow position:
               
chr17:9176094-9175643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 297
               

               
Conread position:
               
108-587
               

               
Cow position:
               
chr17:28359416-28359904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 263
               

               
Conread position:
               
108-589
               

               
Cow position:
               
chr17:11216290-11215824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 75
               

               
Conread position:
               
108-590
               

               
Cow position:
               
chr17:11102200-11101738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 162
               

               
Conread position:
               
108-595
               

               
Cow position:
               
chr17:33934157-33933673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 291
               

               
Conread position:
               
109-261
               

               
Cow position:
               
chr17:997553-997401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-272
               

               
Cow position:
               
chr17:4473174-4473011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr17:6423317-6423490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr17:18884735-18884563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr17:21666640-21666812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr17:24334277-24334449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr17:35232423-35232237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
109-284
               

               
Cow position:
               
chr17:13989650-13989470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 101
               

               
Conread position:
               
109-284
               

               
Cow position:
               
chr17:24534643-24534818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-289
               

               
Cow position:
               
chr17:29810242-29810424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
135, 177
               

               
Conread position:
               
109-290
               

               
Cow position:
               
chr17:32472240-32472059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-290
               

               
Cow position:
               
chr17:39485142-39485317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
109-291
               

               
Cow position:
               
chr17:10494298-10494116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-292
               

               
Cow position:
               
chr17:6623274-6623452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
109-298
               

               
Cow position:
               
chr17:29079965-29080153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
85, 162
               

               
Conread position:
               
109-303
               

               
Cow position:
               
chr17:20215721-20215922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
109-303
               

               
Cow position:
               
chr17:30413594-30413794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
109-303
               

               
Cow position:
               
chr17:36790699-36790891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
109-303
               

               
Cow position:
               
chr17:40811357-40811553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
109-304
               

               
Cow position:
               
chr17:33039965-33039770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-305
               

               
Cow position:
               
chr17:25140842-25141038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
63, 138
               

               
Conread position:
               
109-312
               

               
Cow position:
               
chr17:44233493-44233291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr17:10445794-10445998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr17:15559213-15559417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr17:16904220-16904422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr17:33486710-33486914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr17:38992394-38992597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr17:44030183-44030387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-314
               

               
Cow position:
               
chr17:18122950-18122746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
109-319
               

               
Cow position:
               
chr17:8995798-8995587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
109-319
               

               
Cow position:
               
chr17:43470950-43470741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
109-322
               

               
Cow position:
               
chr17:20912194-20912423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr17:15732225-15732004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
176, 69
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr17:15894717-15894499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr17:16875995-16876213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr17:25835058-25835276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr17:26870675-26870457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr17:28830873-28831089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 203
               

               
Conread position:
               
109-336
               

               
Cow position:
               
chr17:34779640-34779871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
109-354
               

               
Cow position:
               
chr17:40393616-40393867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
109-360
               

               
Cow position:
               
chr17:4107426-4107179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
109-360
               

               
Cow position:
               
chr17:4123162-4122914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
109-365
               

               
Cow position:
               
chr17:42662943-42662689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
217, 55
               

               
Conread position:
               
109-374
               

               
Cow position:
               
chr17:31671259-31670994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-385
               

               
Cow position:
               
chr17:9900718-9901009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
182, 289
               

               
Conread position:
               
109-391
               

               
Cow position:
               
chr17:3352978-3353266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
182, 230
               

               
Conread position:
               
109-393
               

               
Cow position:
               
chr17:32293159-32292867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
109-395
               

               
Cow position:
               
chr17:34676901-34677190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
109-396
               

               
Cow position:
               
chr17:30727864-30728148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
109-397
               

               
Cow position:
               
chr17:3549585-3549283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
109-397
               

               
Cow position:
               
chr17:26344250-26343960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 246
               

               
Conread position:
               
109-402
               

               
Cow position:
               
chr17:1456650-1456350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
109-405
               

               
Cow position:
               
chr17:32307639-32307943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr17:9818300-9817999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr17:15118457-15118758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 0
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr17:31076971-31077271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 261
               

               
Conread position:
               
109-410
               

               
Cow position:
               
chr17:13935527-13935221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
109-410
               

               
Cow position:
               
chr17:20361166-20360858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
193, 268
               

               
Conread position:
               
109-413
               

               
Cow position:
               
chr17:4635016-4634719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
219, 84
               

               
Conread position:
               
109-413
               

               
Cow position:
               
chr17:9660688-9660382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
109-413
               

               
Cow position:
               
chr17:16463524-16463218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
91, 80
               

               
Conread position:
               
109-415
               

               
Cow position:
               
chr17:34191342-34191035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr17:184787-185101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr17:4155196-4155507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 194
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr17:5638251-5637937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr17:23320781-23320470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
92, 263
               

               
Conread position:
               
109-446
               

               
Cow position:
               
chr17:21481828-21482165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 218
               

               
Conread position:
               
109-446
               

               
Cow position:
               
chr17:26476741-26477074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
109-449
               

               
Cow position:
               
chr17:8492760-8492431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
109-449
               

               
Cow position:
               
chr17:31310641-31310296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 296
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr17:77125-76785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr17:5748219-5747867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 308
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr17:9663112-9662772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr17:20546778-20547118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 262
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr17:27053358-27053700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr17:27978745-27979100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 262
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr17:42026126-42026466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 262
               

               
Conread position:
               
109-451
               

               
Cow position:
               
chr17:12220613-12220966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 104
               

               
Conread position:
               
109-451
               

               
Cow position:
               
chr17:18627816-18628155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 179
               

               
Conread position:
               
109-451
               

               
Cow position:
               
chr17:20695820-20696164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
109-457
               

               
Cow position:
               
chr17:12658052-12657705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-457
               

               
Cow position:
               
chr17:28155718-28155370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-461
               

               
Cow position:
               
chr17:6082137-6082471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
109-466
               

               
Cow position:
               
chr17:17266757-17266401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 215
               

               
Conread position:
               
109-467
               

               
Cow position:
               
chr17:7251640-7251993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
223, 104
               

               
Conread position:
               
109-470
               

               
Cow position:
               
chr17:29074751-29074388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
109-473
               

               
Cow position:
               
chr17:6072168-6072533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 235
               

               
Conread position:
               
109-478
               

               
Cow position:
               
chr17:21038871-21039233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 96
               

               
Conread position:
               
109-481
               

               
Cow position:
               
chr17:16869677-16869319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
216, 39
               

               
Conread position:
               
109-481
               

               
Cow position:
               
chr17:42843642-42844014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-488
               

               
Cow position:
               
chr17:399974-399595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-488
               

               
Cow position:
               
chr17:43527571-43527942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
109-489
               

               
Cow position:
               
chr17:16117841-16117457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 167
               

               
Conread position:
               
109-503
               

               
Cow position:
               
chr17:19377510-19377116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-506
               

               
Cow position:
               
chr17:7396653-7396252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 264
               

               
Conread position:
               
109-507
               

               
Cow position:
               
chr17:34390971-34390574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 288
               

               
Conread position:
               
109-510
               

               
Cow position:
               
chr17:15854390-15854782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 61
               

               
Conread position:
               
109-510
               

               
Cow position:
               
chr17:18777195-18776802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 57
               

               
Conread position:
               
109-511
               

               
Cow position:
               
chr17:19214769-19214366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 262
               

               
Conread position:
               
109-513
               

               
Cow position:
               
chr17:4152633-4152227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 262
               

               
Conread position:
               
109-513
               

               
Cow position:
               
chr17:36197211-36197617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
219, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:139256-139659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 155
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:730858-730459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
340, 116
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:1708113-1707710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:2265829-2266236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:2584291-2584692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 192
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:3196996-3196597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 321
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:4177033-4176623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 319
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:6612663-6613070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:8213878-8214285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:11677596-11677189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:13725902-13726306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 297
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:14901515-14901924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 319
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:16699836-16699435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 241
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:16854467-16854061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:17493931-17494338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:18099436-18099046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 56
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:20232141-20231734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:20988010-20987603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:21660125-21659723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:22248612-22248205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:24026344-24025929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 323
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:27791154-27790747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 241
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:28130450-28130050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 182
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:29276822-29277224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 290
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:29824319-29823920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 174
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:33058968-33058562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:34005647-34005244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 219
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:34564987-34565394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:35437684-35438091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:37528107-37527700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:43539644-43540051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr17:43725922-43725518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 316
               

               
Conread position:
               
109-516
               

               
Cow position:
               
chr17:34317127-34316714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 307
               

               
Conread position:
               
109-528
               

               
Cow position:
               
chr17:6155624-6156047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 293
               

               
Conread position:
               
109-531
               

               
Cow position:
               
chr17:1654094-1653682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 139
               

               
Conread position:
               
109-532
               

               
Cow position:
               
chr17:11375110-11374690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
67, 191
               

               
Conread position:
               
109-533
               

               
Cow position:
               
chr17:1568579-1568161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 162
               

               
Conread position:
               
109-534
               

               
Cow position:
               
chr17:23337424-23337004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
109-535
               

               
Cow position:
               
chr17:21363002-21363419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
109-539
               

               
Cow position:
               
chr17:5896322-5895892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
109-539
               

               
Cow position:
               
chr17:11056786-11056353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
109-539
               

               
Cow position:
               
chr17:35233695-35234121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 169
               

               
Conread position:
               
109-540
               

               
Cow position:
               
chr17:1709984-1710402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 289
               

               
Conread position:
               
109-541
               

               
Cow position:
               
chr17:15363977-15363541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 113
               

               
Conread position:
               
109-541
               

               
Cow position:
               
chr17:22087263-22087689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 97
               

               
Conread position:
               
109-542
               

               
Cow position:
               
chr17:8926645-8926196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
109-543
               

               
Cow position:
               
chr17:35287751-35287318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 22
               

               
Conread position:
               
109-544
               

               
Cow position:
               
chr17:21874727-21874282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 274
               

               
Conread position:
               
109-544
               

               
Cow position:
               
chr17:25077235-25076801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 296
               

               
Conread position:
               
109-545
               

               
Cow position:
               
chr17:25755367-25755816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 303
               

               
Conread position:
               
109-547
               

               
Cow position:
               
chr17:3131651-3132079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 131
               

               
Conread position:
               
109-547
               

               
Cow position:
               
chr17:5553874-5553439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
109-565
               

               
Cow position:
               
chr17:27679665-27679197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 307
               

               
Conread position:
               
109-568
               

               
Cow position:
               
chr17:26230529-26230997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 296
               

               
Conread position:
               
109-571
               

               
Cow position:
               
chr17:41029536-41029997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 297
               

               
Conread position:
               
109-579
               

               
Cow position:
               
chr17:22773745-22773275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
109-581
               

               
Cow position:
               
chr17:11786564-11787034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-581
               

               
Cow position:
               
chr17:17958237-17958703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 262
               

               
Conread position:
               
109-582
               

               
Cow position:
               
chr17:3042079-3042534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 148
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:3743804-3744277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:5548910-5548437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:5805850-5805377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:5810016-5809543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:10008974-10008501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:11618171-11618647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 53
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:16874225-16874698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:18564169-18563699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:19317554-19318027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:20391415-20391888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:21212447-21211974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:36284908-36285375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 82
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:36413394-36412921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:39823553-39823080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr17:39844271-39844744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr17:4480242-4479762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 269
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr17:6566069-6566540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 154
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr17:7585060-7585531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr17:9914198-9914672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr17:13144092-13143628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 188
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr17:14212380-14211905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 264
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr17:16505105-16504634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr17:17259868-17260342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr17:27986246-27985772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr17:1970792-1971272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr17:12856892-12857369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr17:19370817-19370340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 302
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr17:21439475-21439950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 63
               

               
Conread position:
               
109-589
               

               
Cow position:
               
chr17:20780109-20780573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 114
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:144574-144110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:2006283-2006759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 207
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:3471021-3471484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 104
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:8690868-8690376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:13940727-13940257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:14026311-14025846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 84
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:16446841-16446371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 258
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:17221935-17222405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 145
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:20848126-20848588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 138
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:21973541-21973065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
381, 220
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:22774980-22775439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 184
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:23063305-23063785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 95
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:24549759-24550242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 223
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:28539630-28540095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:29472071-29472531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 155
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:30529938-30529480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 37
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:30664865-30665337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 156
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:32027869-32027388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 45
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:33272072-33271614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 56
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:34595528-34596005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 212
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr17:40771415-40771901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 104
               

               
Conread position:
               
109-592
               

               
Cow position:
               
chr17:27305755-27306229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 71
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr17:18592029-18592514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr17:20800406-20800885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 139
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr17:21182128-21182624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 272
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr17:24823855-24824314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 74
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr17:6145400-6145887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 324
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr17:8993700-8993213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr17:20226242-20226723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 76
               

               
Conread position:
               
109-601
               

               
Cow position:
               
chr17:22563780-22564262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
109-607
               

               
Cow position:
               
chr17:18201367-18201839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 173
               

               
Conread position:
               
110-233
               

               
Cow position:
               
chr17:18828501-18828378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
110-259
               

               
Cow position:
               
chr17:50473-50324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-267
               

               
Cow position:
               
chr17:21115613-21115456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-284
               

               
Cow position:
               
chr17:24618417-24618600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
110-289
               

               
Cow position:
               
chr17:21666856-21667035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 81
               

               
Conread position:
               
110-289
               

               
Cow position:
               
chr17:25193977-25194156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-290
               

               
Cow position:
               
chr17:35180392-35180575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 149
               

               
Conread position:
               
110-290
               

               
Cow position:
               
chr17:40741200-40741382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
110-299
               

               
Cow position:
               
chr17:3466174-3466364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
110-313
               

               
Cow position:
               
chr17:21767533-21767725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
110-315
               

               
Cow position:
               
chr17:25340944-25340733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
110-349
               

               
Cow position:
               
chr17:34208524-34208285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-362
               

               
Cow position:
               
chr17:20271764-20271513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
110-383
               

               
Cow position:
               
chr17:42258496-42258772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
110-394
               

               
Cow position:
               
chr17:1672160-1671888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
162, 62
               

               
Conread position:
               
110-397
               

               
Cow position:
               
chr17:2270354-2270647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
110-409
               

               
Cow position:
               
chr17:3652085-3651793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
216, 171
               

               
Conread position:
               
110-409
               

               
Cow position:
               
chr17:8673700-8673994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
273, 0
               

               
Conread position:
               
110-450
               

               
Cow position:
               
chr17:15187664-15187330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
110-450
               

               
Cow position:
               
chr17:16320767-16321112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 272
               

               
Conread position:
               
110-451
               

               
Cow position:
               
chr17:21183990-21183647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
110-458
               

               
Cow position:
               
chr17:9818917-9818554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 111
               

               
Conread position:
               
110-461
               

               
Cow position:
               
chr17:1025886-1026217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 70
               

               
Conread position:
               
110-488
               

               
Cow position:
               
chr17:31986559-31986181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-497
               

               
Cow position:
               
chr17:3386888-3387261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 171
               

               
Conread position:
               
110-501
               

               
Cow position:
               
chr17:1481944-1482329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 50
               

               
Conread position:
               
110-510
               

               
Cow position:
               
chr17:5281709-5281308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 81
               

               
Conread position:
               
110-510
               

               
Cow position:
               
chr17:11471498-11471897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 95
               

               
Conread position:
               
110-510
               

               
Cow position:
               
chr17:24785976-24786376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-512
               

               
Cow position:
               
chr17:5000986-5000588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 217
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr17:31084-31490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 329
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr17:8223345-8223749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 206
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr17:14021824-14021426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr17:15439432-15439837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 68
               

               
Conread position:
               
110-517
               

               
Cow position:
               
chr17:15328920-15329329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 295
               

               
Conread position:
               
110-521
               

               
Cow position:
               
chr17:979543-979156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 214
               

               
Conread position:
               
110-529
               

               
Cow position:
               
chr17:11386107-11386523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 219
               

               
Conread position:
               
110-532
               

               
Cow position:
               
chr17:36504436-36504020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 279
               

               
Conread position:
               
110-534
               

               
Cow position:
               
chr17:25740534-25740965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
110-535
               

               
Cow position:
               
chr17:30539658-30539239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 282
               

               
Conread position:
               
110-544
               

               
Cow position:
               
chr17:20591805-20592253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 227
               

               
Conread position:
               
110-563
               

               
Cow position:
               
chr17:32651208-32651662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 38
               

               
Conread position:
               
110-572
               

               
Cow position:
               
chr17:20358470-20358913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 94
               

               
Conread position:
               
110-583
               

               
Cow position:
               
chr17:4601951-4601488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
110-583
               

               
Cow position:
               
chr17:10271075-10271554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
61, 226
               

               
Conread position:
               
110-585
               

               
Cow position:
               
chr17:6956281-6956756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-589
               

               
Cow position:
               
chr17:14003421-14003887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 69
               

               
Conread position:
               
110-589
               

               
Cow position:
               
chr17:20993451-20992973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 277
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr17:2034135-2034594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr17:3781626-3782112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 290
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr17:5898935-5898467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 128
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr17:12289828-12289344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 293
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr17:18861127-18860656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 182
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr17:23803051-23803525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 256
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr17:27698108-27697632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 268
               

               
Conread position:
               
110-595
               

               
Cow position:
               
chr17:23101623-23101147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 178
               

               
Conread position:
               
110-595
               

               
Cow position:
               
chr17:24553596-24554068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 99
               

               
Conread position:
               
111-254
               

               
Cow position:
               
chr17:26803224-26803081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
111-256
               

               
Cow position:
               
chr17:2177615-2177760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
111-281
               

               
Cow position:
               
chr17:12326278-12326108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
111-287
               

               
Cow position:
               
chr17:30712632-30712808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
111-311
               

               
Cow position:
               
chr17:32977604-32977406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
111-313
               

               
Cow position:
               
chr17:2201940-2202142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
111-348
               

               
Cow position:
               
chr17:4940171-4939936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
111-348
               

               
Cow position:
               
chr17:11638479-11638715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
111-382
               

               
Cow position:
               
chr17:40105085-40104809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 181
               

               
Conread position:
               
111-395
               

               
Cow position:
               
chr17:35223141-35223445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
111-397
               

               
Cow position:
               
chr17:32267072-32266775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 211
               

               
Conread position:
               
111-399
               

               
Cow position:
               
chr17:38829677-38829965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 59
               

               
Conread position:
               
111-413
               

               
Cow position:
               
chr17:25145720-25145411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
111-421
               

               
Cow position:
               
chr17:31427371-31427692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
111-440
               

               
Cow position:
               
chr17:18266654-18266990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
214, 153
               

               
Conread position:
               
111-445
               

               
Cow position:
               
chr17:33370625-33370289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
111-447
               

               
Cow position:
               
chr17:32133114-32133447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
111-452
               

               
Cow position:
               
chr17:3154177-3153840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 170
               

               
Conread position:
               
111-474
               

               
Cow position:
               
chr17:26829103-26828739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
215, 260
               

               
Conread position:
               
111-481
               

               
Cow position:
               
chr17:14265961-14265596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 96
               

               
Conread position:
               
111-485
               

               
Cow position:
               
chr17:20269204-20269563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
111-492
               

               
Cow position:
               
chr17:20129272-20129635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
111-503
               

               
Cow position:
               
chr17:25167893-25168298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 230
               

               
Conread position:
               
111-507
               

               
Cow position:
               
chr17:35388428-35388029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 95
               

               
Conread position:
               
111-512
               

               
Cow position:
               
chr17:12357323-12356921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 253
               

               
Conread position:
               
111-514
               

               
Cow position:
               
chr17:29951143-29951537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
111-540
               

               
Cow position:
               
chr17:31232348-31231912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 289
               

               
Conread position:
               
111-580
               

               
Cow position:
               
chr17:40892749-40893206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
111-584
               

               
Cow position:
               
chr17:12059500-12059033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 78
               

               
Conread position:
               
111-585
               

               
Cow position:
               
chr17:38832646-38833103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 88
               

               
Conread position:
               
111-586
               

               
Cow position:
               
chr17:20091003-20090576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
111-588
               

               
Cow position:
               
chr17:20022918-20022451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 37
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr17:1410652-1410166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 66
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr17:25542214-25541745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 39
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr17:36331370-36330885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 142
               

               
Conread position:
               
111-598
               

               
Cow position:
               
chr17:5695351-5694876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
111-615
               

               
Cow position:
               
chr17:21336104-21335599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 11
               

               
Conread position:
               
112-281
               

               
Cow position:
               
chr17:9060426-9060250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
112-288
               

               
Cow position:
               
chr17:30358949-30359126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
112-322
               

               
Cow position:
               
chr17:39783558-39783769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
112-391
               

               
Cow position:
               
chr17:9748361-9748643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
112-422
               

               
Cow position:
               
chr17:30810489-30810803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 241
               

               
Conread position:
               
112-508
               

               
Cow position:
               
chr17:21871143-21870757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 155
               

               
Conread position:
               
112-538
               

               
Cow position:
               
chr17:10649441-10649860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 279
               

               
Conread position:
               
112-588
               

               
Cow position:
               
chr17:923473-923942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 219
               

               
Conread position:
               
112-589
               

               
Cow position:
               
chr17:15334128-15333646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 303
               

               
Conread position:
               
113-459
               

               
Cow position:
               
chr17:40405901-40406243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 168
               

               
Conread position:
               
113-556
               

               
Cow position:
               
chr17:17453018-17452573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
180, 56
               

               
Conread position:
               
113-595
               

               
Cow position:
               
chr17:33289060-33288585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 284
               

               
Conread position:
               
114-590
               

               
Cow position:
               
chr17:5899975-5900434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 184
               

               
Conread position:
               
115-284
               

               
Cow position:
               
chr17:20643298-20643473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
115-418
               

               
Cow position:
               
chr17:36221143-36221471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 319
               

               
Conread position:
               
116-279
               

               
Cow position:
               
chr17:24752677-24752515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
116-290
               

               
Cow position:
               
chr17:38829-39009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
116-314
               

               
Cow position:
               
chr17:23884169-23883973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
116-586
               

               
Cow position:
               
chr17:5541974-5541504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 255
               

               
Conread position:
               
116-590
               

               
Cow position:
               
chr17:20093526-20093061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 78
               

               
Conread position:
               
116-617
               

               
Cow position:
               
chr17:14050591-14050112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
210, 47
               

               
Conread position:
               
117-327
               

               
Cow position:
               
chr17:18894978-18895193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 142
               

               
Conread position:
               
117-332
               

               
Cow position:
               
chr17:23088754-23088968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 59
               

               
Conread position:
               
117-335
               

               
Cow position:
               
chr17:26510240-26510023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
117-342
               

               
Cow position:
               
chr17:27775519-27775753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
117-365
               

               
Cow position:
               
chr17:3490389-3490644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr17:18551588-18551326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 172
               

               
Conread position:
               
117-399
               

               
Cow position:
               
chr17:35441041-35440747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
53, 270
               

               
Conread position:
               
117-405
               

               
Cow position:
               
chr17:36845807-36846104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
117-413
               

               
Cow position:
               
chr17:42382442-42382136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
117-446
               

               
Cow position:
               
chr17:23517568-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 72
               

               
Conread position:
               
117-451
               

               
Cow position:
               
chr17:11767767-11768105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
117-467
               

               
Cow position:
               
chr17:11839298-11839644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 203
               

               
Conread position:
               
117-532
               

               
Cow position:
               
chr17:18494928-18494505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
65, 197
               

               
Conread position:
               
117-532
               

               
Cow position:
               
chr17:20083914-20083511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 275
               

               
Conread position:
               
117-544
               

               
Cow position:
               
chr17:20233825-20234250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 214
               

               
Conread position:
               
117-577
               

               
Cow position:
               
chr17:30204252-30204714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
117-589
               

               
Cow position:
               
chr17:29083802-29084238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 209
               

               
Conread position:
               
117-595
               

               
Cow position:
               
chr17:3388458-3388898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 104
               

               
Conread position:
               
118-507
               

               
Cow position:
               
chr17:9897512-9897888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 188
               

               
Conread position:
               
118-514
               

               
Cow position:
               
chr17:31531960-31532358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 253
               

               
Conread position:
               
118-595
               

               
Cow position:
               
chr17:39735780-39736246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
119-450
               

               
Cow position:
               
chr17:32456801-32456461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
55, 296
               

               
Conread position:
               
119-476
               

               
Cow position:
               
chr17:15318942-15319299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 252
               

               
Conread position:
               
119-595
               

               
Cow position:
               
chr17:32989093-32989548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 268
               

               
Conread position:
               
119-595
               

               
Cow position:
               
chr17:32994013-32993552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 268
               

               
Conread position:
               
120-450
               

               
Cow position:
               
chr17:17128747-17129076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
120-507
               

               
Cow position:
               
chr17:1312778-1313161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
159, 76
               

               
Conread position:
               
120-553
               

               
Cow position:
               
chr17:5997506-5997067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
121-373
               

               
Cow position:
               
chr17:19025331-19025077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
121-447
               

               
Cow position:
               
chr17:30753455-30753123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 266
               

               
Conread position:
               
121-514
               

               
Cow position:
               
chr17:148561-148954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 72
               

               
Conread position:
               
121-590
               

               
Cow position:
               
chr17:4213359-4213807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 306
               

               
Conread position:
               
122-299
               

               
Cow position:
               
chr17:20157173-20157351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 126
               

               
Conread position:
               
123-406
               

               
Cow position:
               
chr17:28169158-28169437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
202, 53
               

               
Conread position:
               
125-451
               

               
Cow position:
               
chr17:9903538-9903861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 216
               

               
Conread position:
               
125-579
               

               
Cow position:
               
chr17:13237121-13236668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 137
               

               
Conread position:
               
128-305
               

               
Cow position:
               
chr17:24587181-24587360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
128-349
               

               
Cow position:
               
chr17:26771729-26771955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
128-589
               

               
Cow position:
               
chr17:32365895-32366350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 190
               

               
Conread position:
               
129-515
               

               
Cow position:
               
chr17:25844349-25844739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 275
               

               
Conread position:
               
130-290
               

               
Cow position:
               
chr17:24787452-24787292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-450
               

               
Cow position:
               
chr17:18764466-18764134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
130-514
               

               
Cow position:
               
chr17:21716534-21716148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 241
               

               
Conread position:
               
130-595
               

               
Cow position:
               
chr17:15300253-15299800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 149
               

               
Conread position:
               
131-284
               

               
Cow position:
               
chr17:36282075-36282228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-289
               

               
Cow position:
               
chr17:6848500-6848664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
131-354
               

               
Cow position:
               
chr17:28232843-28232612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
131-375
               

               
Cow position:
               
chr17:11942041-11942292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 186
               

               
Conread position:
               
131-388
               

               
Cow position:
               
chr17:29109902-29109641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
131-390
               

               
Cow position:
               
chr17:26533323-26533579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
131-405
               

               
Cow position:
               
chr17:18138601-18138884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 251
               

               
Conread position:
               
131-422
               

               
Cow position:
               
chr17:43178175-43177892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
131-506
               

               
Cow position:
               
chr17:3499058-3498679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 275
               

               
Conread position:
               
131-510
               

               
Cow position:
               
chr17:17179655-17180017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
195, 30
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr17:15243889-15243503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
124, 115
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr17:18312119-18312498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 248
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr17:28024229-28023844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 115
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr17:42398048-42398428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 52
               

               
Conread position:
               
131-520
               

               
Cow position:
               
chr17:3684045-3683661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 165
               

               
Conread position:
               
131-540
               

               
Cow position:
               
chr17:20303709-20304117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 58
               

               
Conread position:
               
131-545
               

               
Cow position:
               
chr17:25590617-25590212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
131-569
               

               
Cow position:
               
chr17:3138967-3138550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
323, 190
               

               
Conread position:
               
131-572
               

               
Cow position:
               
chr17:19998748-19999184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 94
               

               
Conread position:
               
131-590
               

               
Cow position:
               
chr17:1493544-1493084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 225
               

               
Conread position:
               
132-365
               

               
Cow position:
               
chr17:37431489-37431250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
132-366
               

               
Cow position:
               
chr17:31744049-31743814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 111
               

               
Conread position:
               
132-372
               

               
Cow position:
               
chr17:39857025-39857267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 134
               

               
Conread position:
               
132-497
               

               
Cow position:
               
chr17:255683-256053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
68, 169
               

               
Conread position:
               
132-569
               

               
Cow position:
               
chr17:41400356-41399928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 184
               

               
Conread position:
               
132-590
               

               
Cow position:
               
chr17:21494990-21495443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 192
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr17:16689367-16689207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
133-312
               

               
Cow position:
               
chr17:20700533-20700359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
133-362
               

               
Cow position:
               
chr17:34883163-34882928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-446
               

               
Cow position:
               
chr17:22057560-22057251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 240
               

               
Conread position:
               
133-518
               

               
Cow position:
               
chr17:11035536-11035920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
133-585
               

               
Cow position:
               
chr17:14932274-14931827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 196
               

               
Conread position:
               
134-330
               

               
Cow position:
               
chr17:1536978-1537174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-360
               

               
Cow position:
               
chr17:874611-874377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr17:1217981-1217718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
134-590
               

               
Cow position:
               
chr17:21293435-21292977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
135-326
               

               
Cow position:
               
chr17:41113386-41113190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
135-548
               

               
Cow position:
               
chr17:36265617-36265225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
135-569
               

               
Cow position:
               
chr17:5730543-5730960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
239, 49
               

               
Conread position:
               
136-331
               

               
Cow position:
               
chr17:28447850-28448052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
136-514
               

               
Cow position:
               
chr17:6858775-6858395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 303
               

               
Conread position:
               
136-521
               

               
Cow position:
               
chr17:21707385-21707015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
136-584
               

               
Cow position:
               
chr17:9698096-9697629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
137-421
               

               
Cow position:
               
chr17:20858419-20858137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 123
               

               
Conread position:
               
137-443
               

               
Cow position:
               
chr17:28140778-28141087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 277
               

               
Conread position:
               
137-590
               

               
Cow position:
               
chr17:32457968-32457500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 269
               

               
Conread position:
               
138-589
               

               
Cow position:
               
chr17:13922098-13922545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 51
               

               
Conread position:
               
139-590
               

               
Cow position:
               
chr17:17061050-17060617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
140-469
               

               
Cow position:
               
chr17:20006179-20006504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
309, 219
               

               
Conread position:
               
140-584
               

               
Cow position:
               
chr17:13999384-13998942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 231
               

               
Conread position:
               
141-274
               

               
Cow position:
               
chr17:11360610-11360743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
142-542
               

               
Cow position:
               
chr17:26084653-26085054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
142-591
               

               
Cow position:
               
chr17:6937034-6936608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
143-295
               

               
Cow position:
               
chr17:38628888-38629041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
143-298
               

               
Cow position:
               
chr17:8450375-8450530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
143-459
               

               
Cow position:
               
chr17:3371073-3371388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
140, 82
               

               
Conread position:
               
144-514
               

               
Cow position:
               
chr17:40368548-40368919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 262
               

               
Conread position:
               
144-584
               

               
Cow position:
               
chr17:27863783-27864221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 227
               

               
Conread position:
               
145-321
               

               
Cow position:
               
chr17:14027750-14027572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
145-343
               

               
Cow position:
               
chr17:484255-484451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
147-311
               

               
Cow position:
               
chr17:4684963-4685127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
147-543
               

               
Cow position:
               
chr17:34628862-34628458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
20, 261
               

               
Conread position:
               
148-279
               

               
Cow position:
               
chr17:4729953-4729822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-413
               

               
Cow position:
               
chr17:5740207-5740454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
148-585
               

               
Cow position:
               
chr17:10025771-10025336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 223
               

               
Conread position:
               
148-591
               

               
Cow position:
               
chr17:9564941-9565373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
149-539
               

               
Cow position:
               
chr17:25608876-25608484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 259
               

               
Conread position:
               
151-514
               

               
Cow position:
               
chr17:8804093-8803742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
339, 16
               

               
Conread position:
               
152-607
               

               
Cow position:
               
chr17:20033279-20032830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 37
               

               
Conread position:
               
154-588
               

               
Cow position:
               
chr17:14239799-14239368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
155-514
               

               
Cow position:
               
chr17:21926346-21926699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
155-514
               

               
Cow position:
               
chr17:26822731-26823092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 216
               

               
Conread position:
               
155-572
               

               
Cow position:
               
chr17:25188919-25189336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
155-584
               

               
Cow position:
               
chr17:25195379-25195806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 216
               

               
Conread position:
               
155-588
               

               
Cow position:
               
chr17:29364440-29364870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 106
               

               
Conread position:
               
157-586
               

               
Cow position:
               
chr17:26514353-26514778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 248
               

               
Conread position:
               
159-514
               

               
Cow position:
               
chr17:24095073-24094716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
167, 212
               

               
Conread position:
               
159-595
               

               
Cow position:
               
chr17:15103237-15102822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 11
               

               
Conread position:
               
160-414
               

               
Cow position:
               
chr17:25344299-25344042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
160-513
               

               
Cow position:
               
chr17:24503491-24503844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
165, 58
               

               
Conread position:
               
160-540
               

               
Cow position:
               
chr17:5280997-5280628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 24
               

               
Conread position:
               
168-365
               

               
Cow position:
               
chr17:19765918-19766114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
157, 8
               

               
Conread position:
               
168-503
               

               
Cow position:
               
chr17:43717660-43717335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 155
               

               
Conread position:
               
168-584
               

               
Cow position:
               
chr17:24580633-24580235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
169-281
               

               
Cow position:
               
chr17:1036234-1036122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
169-510
               

               
Cow position:
               
chr17:36499928-36499589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
158, 239
               

               
Conread position:
               
169-569
               

               
Cow position:
               
chr17:41394059-41393665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
159, 93
               

               
Conread position:
               
169-578
               

               
Cow position:
               
chr17:25815258-25815654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 221
               

               
Conread position:
               
169-590
               

               
Cow position:
               
chr17:40289350-40288935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
197, 112
               

               
Conread position:
               
170-445
               

               
Cow position:
               
chr17:17983123-17982856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
170-590
               

               
Cow position:
               
chr17:26182873-26183293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 227
               

               
Conread position:
               
172-290
               

               
Cow position:
               
chr17:19756527-19756409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
172-324
               

               
Cow position:
               
chr17:16415157-16415004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
172-336
               

               
Cow position:
               
chr17:27938210-27938044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
172-365
               

               
Cow position:
               
chr17:19900139-19900332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
155, 102
               

               
Conread position:
               
172-413
               

               
Cow position:
               
chr17:24293805-24294063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
141, 217
               

               
Conread position:
               
172-437
               

               
Cow position:
               
chr17:28242183-28242446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
153, 200
               

               
Conread position:
               
172-450
               

               
Cow position:
               
chr17:26532524-26532795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
155, 60
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr17:7821379-7821039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
153, 27
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr17:20361517-20361858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
153, 58
               

               
Conread position:
               
172-566
               

               
Cow position:
               
chr17:42419391-42419761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
172-584
               

               
Cow position:
               
chr17:18490191-18490599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
172-590
               

               
Cow position:
               
chr17:9853639-9854049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 233
               

               
Conread position:
               
172-600
               

               
Cow position:
               
chr17:5255720-5255299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
173-327
               

               
Cow position:
               
chr17:19925421-19925268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr17:34153846-34154078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 5
               

               
Conread position:
               
173-507
               

               
Cow position:
               
chr17:16399143-16398807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
152, 199
               

               
Conread position:
               
173-513
               

               
Cow position:
               
chr17:39790341-39790689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
173-514
               

               
Cow position:
               
chr17:10254601-10254944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
153, 198
               

               
Conread position:
               
173-514
               

               
Cow position:
               
chr17:30225105-30224762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
153, 198
               

               
Conread position:
               
173-585
               

               
Cow position:
               
chr17:10354408-10353998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
153, 198
               

               
Conread position:
               
174-595
               

               
Cow position:
               
chr17:20157275-20157679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
177-392
               

               
Cow position:
               
chr17:29450197-29449983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 25
               

               
Conread position:
               
178-337
               

               
Cow position:
               
chr17:12539218-12539062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
135, 7
               

               
Conread position:
               
178-449
               

               
Cow position:
               
chr17:20653242-20652968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
99, 184
               

               
Conread position:
               
178-473
               

               
Cow position:
               
chr17:8644696-8644989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 191
               

               
Conread position:
               
178-501
               

               
Cow position:
               
chr17:26771695-26771377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
147, 213
               

               
Conread position:
               
178-590
               

               
Cow position:
               
chr17:11397329-11397732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 137
               

               
Conread position:
               
179-450
               

               
Cow position:
               
chr17:3095494-3095755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
157, 10
               

               
Conread position:
               
179-533
               

               
Cow position:
               
chr17:8280066-8279697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 170
               

               
Conread position:
               
180-422
               

               
Cow position:
               
chr17:24978770-24979013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
146, 191
               

               
Conread position:
               
180-450
               

               
Cow position:
               
chr17:15893565-15893831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
180-514
               

               
Cow position:
               
chr17:22226598-22226263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
146, 254
               

               
Conread position:
               
180-586
               

               
Cow position:
               
chr17:12929882-12929475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 225
               

               
Conread position:
               
181-397
               

               
Cow position:
               
chr17:19484787-19484570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 190
               

               
Conread position:
               
181-589
               

               
Cow position:
               
chr17:2810279-2810692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
182-585
               

               
Cow position:
               
chr17:15293872-15293471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
144, 189
               

               
Conread position:
               
182-590
               

               
Cow position:
               
chr17:24883901-24883506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 70
               

               
Conread position:
               
182-595
               

               
Cow position:
               
chr17:25900861-25901272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
183-496
               

               
Cow position:
               
chr17:31798467-31798788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
115, 199
               

               
Conread position:
               
183-590
               

               
Cow position:
               
chr17:37342808-37342422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
147, 8
               

               
Conread position:
               
184-422
               

               
Cow position:
               
chr17:28363005-28362775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
184-579
               

               
Cow position:
               
chr17:1061395-1061003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
184-590
               

               
Cow position:
               
chr17:24077071-24077468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 119
               

               
Conread position:
               
184-590
               

               
Cow position:
               
chr17:43142055-43141644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
185-413
               

               
Cow position:
               
chr17:26082300-26082070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
185-511
               

               
Cow position:
               
chr17:25947138-25946810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
140, 240
               

               
Conread position:
               
185-529
               

               
Cow position:
               
chr17:3843159-3843487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
307, 6
               

               
Conread position:
               
185-588
               

               
Cow position:
               
chr17:38837235-38837631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
141, 121
               

               
Conread position:
               
186-397
               

               
Cow position:
               
chr17:9742765-9742977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
186-413
               

               
Cow position:
               
chr17:1105215-1105443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 144
               

               
Conread position:
               
186-516
               

               
Cow position:
               
chr17:19455627-19455317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
139, 50
               

               
Conread position:
               
186-519
               

               
Cow position:
               
chr17:13409685-13409360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
186-584
               

               
Cow position:
               
chr17:23880157-23879762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 33
               

               
Conread position:
               
188-589
               

               
Cow position:
               
chr17:27795317-27795712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 176
               

               
Conread position:
               
189-474
               

               
Cow position:
               
chr17:25875082-25875363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 8
               

               
Conread position:
               
189-584
               

               
Cow position:
               
chr17:5174449-5174056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
137, 182
               

               
Conread position:
               
190-372
               

               
Cow position:
               
chr17:13108349-13108529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
190-513
               

               
Cow position:
               
chr17:16895623-16895313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
150, 177
               

               
Conread position:
               
190-514
               

               
Cow position:
               
chr17:32399850-32399525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
135, 31
               

               
Conread position:
               
190-525
               

               
Cow position:
               
chr17:44924504-44924183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
136, 195
               

               
Conread position:
               
191-409
               

               
Cow position:
               
chr17:30816205-30815986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 180
               

               
Conread position:
               
191-584
               

               
Cow position:
               
chr17:3709537-3709928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 180
               

               
Conread position:
               
192-590
               

               
Cow position:
               
chr17:1463832-1464230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
133, 241
               

               
Conread position:
               
193-613
               

               
Cow position:
               
chr17:10473510-10473923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
194-408
               

               
Cow position:
               
chr17:37693788-37694007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
194-572
               

               
Cow position:
               
chr17:21680443-21680820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 178
               

               
Conread position:
               
196-590
               

               
Cow position:
               
chr17:11304711-11305100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
95, 204
               

               
Conread position:
               
198-413
               

               
Cow position:
               
chr17:22790777-22790993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 145
               

               
Conread position:
               
198-448
               

               
Cow position:
               
chr17:23723556-23723813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
198-450
               

               
Cow position:
               
chr17:7700126-7700377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 201
               

               
Conread position:
               
198-531
               

               
Cow position:
               
chr17:3306549-3306877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 9
               

               
Conread position:
               
199-413
               

               
Cow position:
               
chr17:2274954-2275168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
128, 201
               

               
Conread position:
               
199-455
               

               
Cow position:
               
chr17:6180686-6180940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 121
               

               
Conread position:
               
201-595
               

               
Cow position:
               
chr17:40331453-40331839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 9
               

               
Conread position:
               
202-351
               

               
Cow position:
               
chr17:39257331-39257184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 88
               

               
Conread position:
               
202-367
               

               
Cow position:
               
chr17:10308328-10308163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
204-362
               

               
Cow position:
               
chr17:28224338-28224179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
204-413
               

               
Cow position:
               
chr17:20874011-20874211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
204-535
               

               
Cow position:
               
chr17:20824640-20824306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
130, 233
               

               
Conread position:
               
204-587
               

               
Cow position:
               
chr17:40421354-40421733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 200
               

               
Conread position:
               
204-590
               

               
Cow position:
               
chr17:1783921-1783539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
205-488
               

               
Cow position:
               
chr17:14008163-14008451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 174
               

               
Conread position:
               
205-488
               

               
Cow position:
               
chr17:15040719-15040436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
121, 166
               

               
Conread position:
               
205-525
               

               
Cow position:
               
chr17:4299312-4299619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
286, 21
               

               
Conread position:
               
205-579
               

               
Cow position:
               
chr17:242325-242692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
205-588
               

               
Cow position:
               
chr17:17032934-17032553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
121, 166
               

               
Conread position:
               
205-590
               

               
Cow position:
               
chr17:34079412-34079046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 194
               

               
Conread position:
               
206-413
               

               
Cow position:
               
chr17:9936472-9936263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
206-533
               

               
Cow position:
               
chr17:4606659-4606967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
206-541
               

               
Cow position:
               
chr17:9117335-9117664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
209-365
               

               
Cow position:
               
chr17:26519622-26519465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
209-393
               

               
Cow position:
               
chr17:12024039-12023862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
209-409
               

               
Cow position:
               
chr17:2730108-2729906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
209-462
               

               
Cow position:
               
chr17:18410835-18410582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 162
               

               
Conread position:
               
209-584
               

               
Cow position:
               
chr17:6065408-6065781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
117, 162
               

               
Conread position:
               
209-596
               

               
Cow position:
               
chr17:3156597-3156984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
117, 202
               

               
Conread position:
               
210-397
               

               
Cow position:
               
chr17:30806012-30805824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
210-514
               

               
Cow position:
               
chr17:13278721-13278416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
210-590
               

               
Cow position:
               
chr17:30718725-30718353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
210-615
               

               
Cow position:
               
chr17:20889067-20889464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
244, 5
               

               
Conread position:
               
211-450
               

               
Cow position:
               
chr17:34017276-34017039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
213-348
               

               
Cow position:
               
chr17:4165252-4165389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
213-510
               

               
Cow position:
               
chr17:40642396-40642097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
112, 192
               

               
Conread position:
               
213-589
               

               
Cow position:
               
chr17:17405816-17406199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 208
               

               
Conread position:
               
214-348
               

               
Cow position:
               
chr17:36313954-36314090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
214-348
               

               
Cow position:
               
chr17:36318009-36318145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
214-422
               

               
Cow position:
               
chr17:7128875-7129071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr17:588152-587926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
71, 108
               

               
Conread position:
               
214-473
               

               
Cow position:
               
chr17:13871245-13871504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 157
               

               
Conread position:
               
214-514
               

               
Cow position:
               
chr17:2517144-2516845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
118, 218
               

               
Conread position:
               
214-514
               

               
Cow position:
               
chr17:2520363-2520064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
118, 218
               

               
Conread position:
               
214-514
               

               
Cow position:
               
chr17:10318826-10319128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 157
               

               
Conread position:
               
214-580
               

               
Cow position:
               
chr17:11171491-11171848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
214-590
               

               
Cow position:
               
chr17:17121371-17121736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 178
               

               
Conread position:
               
215-327
               

               
Cow position:
               
chr17:2249757-2249645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
215-484
               

               
Cow position:
               
chr17:40312428-40312687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
234, 24
               

               
Conread position:
               
215-579
               

               
Cow position:
               
chr17:1295875-1295517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 175
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:19906780-19906977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 139
               

               
Conread position:
               
216-487
               

               
Cow position:
               
chr17:18337986-18337715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 155
               

               
Conread position:
               
217-590
               

               
Cow position:
               
chr17:25181448-25181078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
218-356
               

               
Cow position:
               
chr17:18146026-18145886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
218-514
               

               
Cow position:
               
chr17:43008417-43008715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
107, 187
               

               
Conread position:
               
219-525
               

               
Cow position:
               
chr17:24973650-24973955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 153
               

               
Conread position:
               
219-580
               

               
Cow position:
               
chr17:5224103-5224457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 160
               

               
Conread position:
               
219-595
               

               
Cow position:
               
chr17:38614660-38615032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
221-586
               

               
Cow position:
               
chr17:28285317-28284967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
275, 34
               

               
Conread position:
               
221-590
               

               
Cow position:
               
chr17:5688645-5688296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
221-595
               

               
Cow position:
               
chr17:18109384-18109012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 176
               

               
Conread position:
               
225-450
               

               
Cow position:
               
chr17:27069190-27069408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 65
               

               
Conread position:
               
225-525
               

               
Cow position:
               
chr17:12216365-12216069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
225-585
               

               
Cow position:
               
chr17:33291091-33290750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
207, 79
               

               
Conread position:
               
226-514
               

               
Cow position:
               
chr17:4339349-4339069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 164
               

               
Conread position:
               
226-590
               

               
Cow position:
               
chr17:15664376-15664742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 170
               

               
Conread position:
               
228-409
               

               
Cow position:
               
chr17:13458109-13457927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 143
               

               
Conread position:
               
228-422
               

               
Cow position:
               
chr17:15352783-15352982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
228-510
               

               
Cow position:
               
chr17:15225852-15225571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
228-575
               

               
Cow position:
               
chr17:21313106-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 181
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr17:6801310-6800952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 177
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr17:15910261-15910619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
98, 143
               

               
Conread position:
               
230-514
               

               
Cow position:
               
chr17:43324507-43324221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 142
               

               
Conread position:
               
231-507
               

               
Cow position:
               
chr17:31122886-31122608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 174
               

               
Conread position:
               
233-445
               

               
Cow position:
               
chr17:4085419-4085628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 8
               

               
Conread position:
               
233-503
               

               
Cow position:
               
chr17:16448048-16448318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
215, 75
               

               
Conread position:
               
233-584
               

               
Cow position:
               
chr17:25707659-25708019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 183
               

               
Conread position:
               
233-590
               

               
Cow position:
               
chr17:18720730-18720382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
234-422
               

               
Cow position:
               
chr17:4752603-4752787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
234-581
               

               
Cow position:
               
chr17:10634343-10634002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 166
               

               
Conread position:
               
234-590
               

               
Cow position:
               
chr17:19891332-19891689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
235-590
               

               
Cow position:
               
chr17:42435920-42435577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 62
               

               
Conread position:
               
237-351
               

               
Cow position:
               
chr17:5870905-5871021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
237-584
               

               
Cow position:
               
chr17:30059706-30060051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
237-585
               

               
Cow position:
               
chr17:21771322-21771678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
238-514
               

               
Cow position:
               
chr17:14243889-14244167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 167
               

               
Conread position:
               
238-593
               

               
Cow position:
               
chr17:1080723-1081063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
234, 116
               

               
Conread position:
               
241-536
               

               
Cow position:
               
chr17:21620436-21620733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 164
               

               
Conread position:
               
241-580
               

               
Cow position:
               
chr17:8544030-8544359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
241-583
               

               
Cow position:
               
chr17:18472909-18473222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
241-584
               

               
Cow position:
               
chr17:11376583-11376924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 130
               

               
Conread position:
               
242-478
               

               
Cow position:
               
chr17:12054444-12054676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
217, 5
               

               
Conread position:
               
243-518
               

               
Cow position:
               
chr17:37163805-37163524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 164
               

               
Conread position:
               
244-514
               

               
Cow position:
               
chr17:14051376-14051105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
244-593
               

               
Cow position:
               
chr17:3503304-3503651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
245-413
               

               
Cow position:
               
chr17:6997816-6997982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
246-455
               

               
Cow position:
               
chr17:22082165-22081969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
246-519
               

               
Cow position:
               
chr17:7041210-7040949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
247-434
               

               
Cow position:
               
chr17:8832375-8832191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
247-469
               

               
Cow position:
               
chr17:17950971-17951191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 152
               

               
Conread position:
               
247-521
               

               
Cow position:
               
chr17:22032955-22032691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 77
               

               
Conread position:
               
247-529
               

               
Cow position:
               
chr17:20126349-20126620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
246, 78
               

               
Conread position:
               
247-589
               

               
Cow position:
               
chr17:7760742-7760407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 160
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr17:25796611-25796272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 157
               

               
Conread position:
               
249-595
               

               
Cow position:
               
chr17:18495776-18495445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
243, 23
               

               
Conread position:
               
250-514
               

               
Cow position:
               
chr17:16292120-16291853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 122
               

               
Conread position:
               
251-514
               

               
Cow position:
               
chr17:37161147-37161405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
252-525
               

               
Cow position:
               
chr17:7811010-7810741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 159
               

               
Conread position:
               
252-579
               

               
Cow position:
               
chr17:5330308-5330638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 151
               

               
Conread position:
               
252-590
               

               
Cow position:
               
chr17:9746258-9746581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
240, 33
               

               
Conread position:
               
252-595
               

               
Cow position:
               
chr17:5423343-5422997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
253-413
               

               
Cow position:
               
chr17:42559850-42560007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 121
               

               
Conread position:
               
253-521
               

               
Cow position:
               
chr17:31481305-31481037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
147, 32
               

               
Conread position:
               
253-590
               

               
Cow position:
               
chr17:8079051-8079377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 103
               

               
Conread position:
               
254-569
               

               
Cow position:
               
chr17:42347486-42347180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 136
               

               
Conread position:
               
254-590
               

               
Cow position:
               
chr17:9568052-9567725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 145
               

               
Conread position:
               
254-595
               

               
Cow position:
               
chr17:26818717-26818386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 150
               

               
Conread position:
               
256-585
               

               
Cow position:
               
chr17:3511652-3511325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
256-628
               

               
Cow position:
               
chr17:4612339-4611979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
258-595
               

               
Cow position:
               
chr17:21115206-21114882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
261-532
               

               
Cow position:
               
chr17:33121830-33122105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 150
               

               
Conread position:
               
264-413
               

               
Cow position:
               
chr17:24754684-24754531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
264-588
               

               
Cow position:
               
chr17:9079444-9079141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
5, 118
               

               
Conread position:
               
266-514
               

               
Cow position:
               
chr17:21494469-21494219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
266-585
               

               
Cow position:
               
chr17:8212833-8213150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
266-595
               

               
Cow position:
               
chr17:17059187-17059495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
276, 122
               

               
Conread position:
               
268-503
               

               
Cow position:
               
chr17:27142503-27142739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 153
               

               
Conread position:
               
268-595
               

               
Cow position:
               
chr17:21004082-21003754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 146
               

               
Conread position:
               
269-461
               

               
Cow position:
               
chr17:41995542-41995734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
270-583
               

               
Cow position:
               
chr17:21244042-21243729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
271-572
               

               
Cow position:
               
chr17:21031540-21031834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
183, 58
               

               
Conread position:
               
272-585
               

               
Cow position:
               
chr17:32419366-32419056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
273-590
               

               
Cow position:
               
chr17:16371004-16371321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
274-509
               

               
Cow position:
               
chr17:24876893-24877130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 131
               

               
Conread position:
               
276-525
               

               
Cow position:
               
chr17:21017553-21017800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
277-585
               

               
Cow position:
               
chr17:6423519-6423824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
277-589
               

               
Cow position:
               
chr17:7697814-7698115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
277-590
               

               
Cow position:
               
chr17:33999287-33998986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 101
               

               
Conread position:
               
279-510
               

               
Cow position:
               
chr17:17267172-17266945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
279-584
               

               
Cow position:
               
chr17:1526593-1526292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
213, 49
               

               
Conread position:
               
283-595
               

               
Cow position:
               
chr17:11664824-11664513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 46
               

               
Conread position:
               
284-446
               

               
Cow position:
               
chr17:15376088-15376244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
285-583
               

               
Cow position:
               
chr17:3466601-3466886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
286-514
               

               
Cow position:
               
chr17:26627876-26627646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 150
               

               
Conread position:
               
286-595
               

               
Cow position:
               
chr17:14848755-14848470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
287-557
               

               
Cow position:
               
chr17:27162421-27162684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
287-590
               

               
Cow position:
               
chr17:27047931-27048221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
290-590
               

               
Cow position:
               
chr17:13989403-13989107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
291-534
               

               
Cow position:
               
chr17:4824273-4824508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 34
               

               
Conread position:
               
291-585
               

               
Cow position:
               
chr17:35126486-35126770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
291-586
               

               
Cow position:
               
chr17:11172842-11172554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
291-590
               

               
Cow position:
               
chr17:6624026-6624321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
291-590
               

               
Cow position:
               
chr17:7132683-7132375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
292-533
               

               
Cow position:
               
chr17:20839785-20839548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
292-541
               

               
Cow position:
               
chr17:39012491-39012744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
293-473
               

               
Cow position:
               
chr17:23680758-23680930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 114
               

               
Conread position:
               
293-492
               

               
Cow position:
               
chr17:14088553-14088354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
293-501
               

               
Cow position:
               
chr17:1359023-1358822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
293-505
               

               
Cow position:
               
chr17:32554249-32554041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
200, 36
               

               
Conread position:
               
293-507
               

               
Cow position:
               
chr17:38116186-38116396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
293-543
               

               
Cow position:
               
chr17:12220164-12219916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
293-543
               

               
Cow position:
               
chr17:34948414-34948659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
293-582
               

               
Cow position:
               
chr17:33403166-33402879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
293-584
               

               
Cow position:
               
chr17:38200992-38200705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
293-585
               

               
Cow position:
               
chr17:36790922-36791196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
194, 32
               

               
Conread position:
               
293-589
               

               
Cow position:
               
chr17:24787247-24786959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
293-590
               

               
Cow position:
               
chr17:11832364-11832050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
293-590
               

               
Cow position:
               
chr17:20215946-20216233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
199, 100
               

               
Conread position:
               
293-590
               

               
Cow position:
               
chr17:24761449-24761163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 36
               

               
Conread position:
               
293-595
               

               
Cow position:
               
chr17:24587392-24587696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
293-615
               

               
Cow position:
               
chr17:9778025-9778336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
296-601
               

               
Cow position:
               
chr17:34208043-34207739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
297-515
               

               
Cow position:
               
chr17:30999554-30999760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
297-545
               

               
Cow position:
               
chr17:37415122-37414872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
299-579
               

               
Cow position:
               
chr17:18884567-18884276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
300-413
               

               
Cow position:
               
chr17:32977193-32977078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
300-585
               

               
Cow position:
               
chr17:25128568-25128293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
300-590
               

               
Cow position:
               
chr17:2662190-2662489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
301-470
               

               
Cow position:
               
chr17:12759858-12759689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
301-497
               

               
Cow position:
               
chr17:3258279-3258469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
153, 88
               

               
Conread position:
               
301-523
               

               
Cow position:
               
chr17:29040684-29040464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
301-635
               

               
Cow position:
               
chr17:30713135-30713455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
302-492
               

               
Cow position:
               
chr17:21710288-21710474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
303-548
               

               
Cow position:
               
chr17:7890395-7890148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
303-590
               

               
Cow position:
               
chr17:21628267-21628543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
305-595
               

               
Cow position:
               
chr17:4225705-4225427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
306-502
               

               
Cow position:
               
chr17:1328183-1327992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
306-505
               

               
Cow position:
               
chr17:3182797-3182601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
187, 77
               

               
Conread position:
               
306-547
               

               
Cow position:
               
chr17:19756113-19755875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
306-575
               

               
Cow position:
               
chr17:33926334-33926073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
227, 25
               

               
Conread position:
               
306-582
               

               
Cow position:
               
chr17:39771183-39771450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
306-587
               

               
Cow position:
               
chr17:25097250-25097524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
186, 77
               

               
Conread position:
               
306-587
               

               
Cow position:
               
chr17:33792969-33793228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
306-590
               

               
Cow position:
               
chr17:15684292-15684574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
306-590
               

               
Cow position:
               
chr17:23245999-23246273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
306-590
               

               
Cow position:
               
chr17:41290230-41289957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
306-595
               

               
Cow position:
               
chr17:32472004-32471709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
307-569
               

               
Cow position:
               
chr17:1275307-1275571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
307-580
               

               
Cow position:
               
chr17:40741435-40741703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
307-588
               

               
Cow position:
               
chr17:11156705-11156430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
307-590
               

               
Cow position:
               
chr17:21739096-21738809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
308-590
               

               
Cow position:
               
chr17:31231325-31231051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
309-503
               

               
Cow position:
               
chr17:966949-966759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
309-540
               

               
Cow position:
               
chr17:22781482-22781709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
309-584
               

               
Cow position:
               
chr17:27765071-27765333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
309-590
               

               
Cow position:
               
chr17:11361973-11362250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
309-590
               

               
Cow position:
               
chr17:41892281-41891996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
309-644
               

               
Cow position:
               
chr17:18174014-18173698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
310-530
               

               
Cow position:
               
chr17:10446707-10446926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
310-584
               

               
Cow position:
               
chr17:2839681-2839968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 226
               

               
Conread position:
               
310-595
               

               
Cow position:
               
chr17:32279116-32278836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
310-595
               

               
Cow position:
               
chr17:38646859-38647133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
280, 15
               

               
Conread position:
               
312-459
               

               
Cow position:
               
chr17:13124943-13124796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
312-503
               

               
Cow position:
               
chr17:33052656-33052839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
312-567
               

               
Cow position:
               
chr17:15067830-15067583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
313-585
               

               
Cow position:
               
chr17:1035810-1035537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
313-609
               

               
Cow position:
               
chr17:27429372-27429663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
315-590
               

               
Cow position:
               
chr17:44232924-44232647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
318-535
               

               
Cow position:
               
chr17:26224317-26224525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 86
               

               
Conread position:
               
318-590
               

               
Cow position:
               
chr17:5006692-5006421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
318-590
               

               
Cow position:
               
chr17:22806739-22806478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
320-502
               

               
Cow position:
               
chr17:21412446-21412265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
320-569
               

               
Cow position:
               
chr17:21434928-21434682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
321-543
               

               
Cow position:
               
chr17:24490323-24490547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
321-579
               

               
Cow position:
               
chr17:1256702-1256446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
322-541
               

               
Cow position:
               
chr17:21697536-21697755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 82
               

               
Conread position:
               
323-585
               

               
Cow position:
               
chr17:12590969-12591229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 18
               

               
Conread position:
               
323-590
               

               
Cow position:
               
chr17:14762317-14762057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
325-532
               

               
Cow position:
               
chr17:20072268-20072080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
325-572
               

               
Cow position:
               
chr17:35311228-35311474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
325-575
               

               
Cow position:
               
chr17:32950079-32950325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
325-585
               

               
Cow position:
               
chr17:26881530-26881271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
158, 79
               

               
Conread position:
               
325-590
               

               
Cow position:
               
chr17:37482272-37482004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
123, 214
               

               
Conread position:
               
325-593
               

               
Cow position:
               
chr17:21207328-21207073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
168, 79
               

               
Conread position:
               
325-595
               

               
Cow position:
               
chr17:12447591-12447329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
167, 23
               

               
Conread position:
               
329-590
               

               
Cow position:
               
chr17:25999927-26000186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
163, 78
               

               
Conread position:
               
329-595
               

               
Cow position:
               
chr17:9911574-9911832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
330-548
               

               
Cow position:
               
chr17:4436420-4436203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
330-589
               

               
Cow position:
               
chr17:908558-908804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
162, 73
               

               
Conread position:
               
330-595
               

               
Cow position:
               
chr17:25611905-25612158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
160, 73
               

               
Conread position:
               
332-593
               

               
Cow position:
               
chr17:32273869-32273617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
160, 9
               

               
Conread position:
               
335-587
               

               
Cow position:
               
chr17:1063006-1063238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
335-595
               

               
Cow position:
               
chr17:12536651-12536393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
336-580
               

               
Cow position:
               
chr17:3577356-3577594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
206, 69
               

               
Conread position:
               
337-595
               

               
Cow position:
               
chr17:265475-265743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 166
               

               
Conread position:
               
339-590
               

               
Cow position:
               
chr17:8837128-8836881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
343-580
               

               
Cow position:
               
chr17:10459111-10458881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
343-590
               

               
Cow position:
               
chr17:24149002-24149249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
111, 64
               

               
Conread position:
               
345-583
               

               
Cow position:
               
chr17:20990367-20990135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
346-589
               

               
Cow position:
               
chr17:1634654-1634428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
177, 22
               

               
Conread position:
               
347-589
               

               
Cow position:
               
chr17:24821695-24821926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
195, 54
               

               
Conread position:
               
352-585
               

               
Cow position:
               
chr17:10510828-10510597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
357-590
               

               
Cow position:
               
chr17:7142703-7142926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
357-595
               

               
Cow position:
               
chr17:4106147-4105922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
228, 44
               

               
Conread position:
               
357-595
               

               
Cow position:
               
chr17:4121883-4121658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
228, 44
               

               
Conread position:
               
360-505
               

               
Cow position:
               
chr17:20928752-20928898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
361-640
               

               
Cow position:
               
chr17:18146025-18146303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
368-595
               

               
Cow position:
               
chr17:4967960-4968184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
368-595
               

               
Cow position:
               
chr17:31037530-31037305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
382-595
               

               
Cow position:
               
chr17:32280529-32280736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
399-576
               

               
Cow position:
               
chr17:32018006-32017825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
400-590
               

               
Cow position:
               
chr17:20884397-20884588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
402-595
               

               
Cow position:
               
chr17:33658190-33657996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
405-590
               

               
Cow position:
               
chr17:32348955-32349136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
408-590
               

               
Cow position:
               
chr17:25501994-25502178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
410-585
               

               
Cow position:
               
chr17:25616145-25616310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
421-583
               

               
Cow position:
               
chr17:32009540-32009382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
425-595
               

               
Cow position:
               
chr17:25514222-25514051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
428-590
               

               
Cow position:
               
chr17:7654551-7654387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
429-595
               

               
Cow position:
               
chr17:21325238-21325404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
432-589
               

               
Cow position:
               
chr17:15340844-15340690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
436-590
               

               
Cow position:
               
chr17:23798191-23798346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
436-590
               

               
Cow position:
               
chr17:27203132-27202981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
436-595
               

               
Cow position:
               
chr17:23517030-23516870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
438-595
               

               
Cow position:
               
chr17:21758224-21758069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
445-595
               

               
Cow position:
               
chr17:9824590-9824741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
459-595
               

               
Cow position:
               
chr17:21478987-21478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 90
               
Show alignments to all cow chromosomes.