Cow genome map

Conread name: Ss1.1-Pig4-TMW8018I16.3

Conread position: 85-586
Cow position: chr21:10071338-10070848 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 31

Conread position: 97-584
Cow position: chr21:42500637-42501126 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 122

Conread position: 98-569
Cow position: chr21:45866541-45867001 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 106

Conread position: 99-248
Cow position: chr21:35437745-35437598 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 100-280
Cow position: chr21:459044-459226 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 84, 6

Conread position: 101-259
Cow position: chr21:24111023-24110865 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 102-249
Cow position: chr21:29015553-29015406 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 102-281
Cow position: chr21:20243685-20243503 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 20

Conread position: 102-290
Cow position: chr21:12075799-12075621 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 99, 14

Conread position: 102-291
Cow position: chr21:36995583-36995397 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 76

Conread position: 102-312
Cow position: chr21:10516174-10515970 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 141
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 0

Conread position: 102-318
Cow position: chr21:27623514-27623725 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 36

Conread position: 102-323
Cow position: chr21:21027396-21027626 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 20

Conread position: 102-339
Cow position: chr21:2935142-2934913 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 102-382
Cow position: chr21:30158870-30158584 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 114

Conread position: 102-438
Cow position: chr21:20234670-20234333 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 237

Conread position: 102-448
Cow position: chr21:29253279-29252940 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 65, 23

Conread position: 102-466
Cow position: chr21:37874125-37874488 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 102-514
Cow position: chr21:11292644-11293058 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 269

Conread position: 102-514
Cow position: chr21:32191786-32192190 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 61

Conread position: 102-520
Cow position: chr21:37942082-37941666 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 21

Conread position: 102-533
Cow position: chr21:26829629-26829224 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 390, 181

Conread position: 102-572
Cow position: chr21:24796429-24795964 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 171

Conread position: 102-589
Cow position: chr21:44826257-44825802 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 14

Conread position: 102-590
Cow position: chr21:5566586-5567075 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 157

Conread position: 102-590
Cow position: chr21:12153743-12154221 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 28

Conread position: 102-590
Cow position: chr21:17174752-17175235 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 202

Conread position: 102-595
Cow position: chr21:23801503-23801033 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 329
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 165, 14

Conread position: 102-595
Cow position: chr21:42540613-42540127 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 14

Conread position: 103-399
Cow position: chr21:32814209-32813906 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 203

Conread position: 103-403
Cow position: chr21:42681366-42681058 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 19

Conread position: 104-457
Cow position: chr21:46462798-46463150 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 86

Conread position: 105-484
Cow position: chr21:18932103-18932471 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 36

Conread position: 105-534
Cow position: chr21:17478994-17479407 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 288
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 345, 101

Conread position: 105-569
Cow position: chr21:42914135-42913676 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 95

Conread position: 106-296
Cow position: chr21:46830536-46830342 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 17

Conread position: 106-411
Cow position: chr21:28642192-28641885 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 181, 54

Conread position: 106-590
Cow position: chr21:7564712-7564219 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 243

Conread position: 107-244
Cow position: chr21:8896568-8896431 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 107-290
Cow position: chr21:22167017-22166828 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 107-290
Cow position: chr21:22176425-22176236 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 107-327
Cow position: chr21:21961145-21961362 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 158, 27

Conread position: 107-411
Cow position: chr21:37297702-37297409 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 165

Conread position: 107-413
Cow position: chr21:13250742-13250419 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 144

Conread position: 107-470
Cow position: chr21:29500518-29500880 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 18

Conread position: 107-508
Cow position: chr21:34738210-34738606 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 84

Conread position: 107-535
Cow position: chr21:23606286-23606710 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 24

Conread position: 107-543
Cow position: chr21:18494591-18495012 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 73

Conread position: 107-571
Cow position: chr21:14760189-14760643 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 146

Conread position: 107-585
Cow position: chr21:28881760-28882221 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 183

Conread position: 107-590
Cow position: chr21:19766466-19766942 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 16

Conread position: 107-590
Cow position: chr21:24864759-24865248 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 309

Conread position: 107-590
Cow position: chr21:44566087-44565629 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 333
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 190, 65

Conread position: 107-594
Cow position: chr21:7815106-7814616 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 108-293
Cow position: chr21:13585506-13585323 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 102

Conread position: 108-303
Cow position: chr21:44861649-44861448 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 108-327
Cow position: chr21:39674951-39675171 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 108-330
Cow position: chr21:39672286-39672508 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 108-369
Cow position: chr21:14727668-14727919 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 108-404
Cow position: chr21:26986-27286 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 271

Conread position: 108-413
Cow position: chr21:13300765-13301067 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 51

Conread position: 108-416
Cow position: chr21:12507018-12507333 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 60

Conread position: 108-422
Cow position: chr21:25042101-25042416 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 108-450
Cow position: chr21:34899742-34899401 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 264

Conread position: 108-489
Cow position: chr21:35898009-35897644 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 173

Conread position: 108-513
Cow position: chr21:30966000-30965594 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 239

Conread position: 108-514
Cow position: chr21:19698946-19698546 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 277
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 217, 47

Conread position: 108-514
Cow position: chr21:23329400-23328992 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 303

Conread position: 108-514
Cow position: chr21:48459256-48458848 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 297

Conread position: 108-521
Cow position: chr21:28617214-28617611 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 173

Conread position: 108-543
Cow position: chr21:20107138-20106711 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 292
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 78, 144

Conread position: 108-569
Cow position: chr21:21170332-21169877 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 108-582
Cow position: chr21:5238018-5238467 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 318
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 217, 178

Conread position: 108-595
Cow position: chr21:4905356-4904872 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 84

Conread position: 108-595
Cow position: chr21:25764247-25764731 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 69

Conread position: 109-237
Cow position: chr21:33350316-33350442 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 109-244
Cow position: chr21:4812391-4812256 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-248
Cow position: chr21:10664053-10664192 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-253
Cow position: chr21:18044167-18044023 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-268
Cow position: chr21:28026738-28026898 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 109-272
Cow position: chr21:18828724-18828561 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 109-273
Cow position: chr21:18846210-18846051 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 109, 0

Conread position: 109-280
Cow position: chr21:8686620-8686449 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 109-280
Cow position: chr21:23341594-23341766 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 131, 0

Conread position: 109-281
Cow position: chr21:6051090-6051268 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 109-281
Cow position: chr21:36956571-36956745 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 109-284
Cow position: chr21:23283220-23283044 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 166, 0

Conread position: 109-284
Cow position: chr21:33107551-33107376 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 109-288
Cow position: chr21:30151011-30150827 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 160

Conread position: 109-290
Cow position: chr21:2261068-2260878 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 109-290
Cow position: chr21:25799977-25800163 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 74, 101

Conread position: 109-291
Cow position: chr21:9218548-9218725 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 155, 54

Conread position: 109-293
Cow position: chr21:13163537-13163708 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 18, 0

Conread position: 109-293
Cow position: chr21:18818719-18818533 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 39

Conread position: 109-293
Cow position: chr21:39508023-39507844 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 109-294
Cow position: chr21:28768823-28768638 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 109-295
Cow position: chr21:4541260-4541070 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 146, 0

Conread position: 109-295
Cow position: chr21:21076741-21076926 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 139

Conread position: 109-295
Cow position: chr21:39583867-39583685 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 20

Conread position: 109-297
Cow position: chr21:10000676-10000488 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 81

Conread position: 109-297
Cow position: chr21:20910490-20910310 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 109-300
Cow position: chr21:45355050-45355247 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 181

Conread position: 109-302
Cow position: chr21:46860754-46860560 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 159, 80

Conread position: 109-303
Cow position: chr21:297336-297526 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 160, 0

Conread position: 109-303
Cow position: chr21:1752333-1752527 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 109-303
Cow position: chr21:2810500-2810307 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 109-303
Cow position: chr21:25473115-25473308 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 149, 0

Conread position: 109-303
Cow position: chr21:27146592-27146398 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 109-303
Cow position: chr21:27619577-27619383 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 64, 70

Conread position: 109-303
Cow position: chr21:34835842-34835648 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 80

Conread position: 109-303
Cow position: chr21:38908152-38908353 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 0

Conread position: 109-303
Cow position: chr21:45781794-45781601 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 138

Conread position: 109-310
Cow position: chr21:48531123-48531324 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 109-311
Cow position: chr21:32358952-32358750 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-312
Cow position: chr21:8451458-8451662 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 183, 0

Conread position: 109-313
Cow position: chr21:16889901-16889697 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 109-313
Cow position: chr21:19050877-19050670 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 20

Conread position: 109-313
Cow position: chr21:31040826-31040620 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 172, 0

Conread position: 109-313
Cow position: chr21:49662808-49662600 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 60, 135

Conread position: 109-314
Cow position: chr21:13257283-13257488 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 70

Conread position: 109-316
Cow position: chr21:3496563-3496357 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 109-316
Cow position: chr21:11083012-11082801 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 109-317
Cow position: chr21:22464402-22464611 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 145, 0

Conread position: 109-322
Cow position: chr21:16278324-16278537 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 109-326
Cow position: chr21:32560025-32559807 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 209, 0

Conread position: 109-327
Cow position: chr21:11353435-11353653 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 109-327
Cow position: chr21:25738264-25738046 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 109-327
Cow position: chr21:36115947-36116161 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 67, 13

Conread position: 109-331
Cow position: chr21:42442994-42442772 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 109-332
Cow position: chr21:31252940-31253165 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 186, 0

Conread position: 109-336
Cow position: chr21:19882302-19882067 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 54

Conread position: 109-336
Cow position: chr21:23028094-23028322 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 139

Conread position: 109-337
Cow position: chr21:29839778-29840005 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 20

Conread position: 109-346
Cow position: chr21:19237331-19237567 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 216, 209

Conread position: 109-365
Cow position: chr21:2206738-2206475 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 58

Conread position: 109-365
Cow position: chr21:44657931-44658187 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 109-372
Cow position: chr21:49423643-49423910 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 238

Conread position: 109-374
Cow position: chr21:27712823-27712553 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 109-379
Cow position: chr21:45658-45929 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 109-379
Cow position: chr21:9981075-9980817 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 217, 128

Conread position: 109-381
Cow position: chr21:40013749-40013476 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 216, 0

Conread position: 109-385
Cow position: chr21:8274572-8274299 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 92, 82

Conread position: 109-385
Cow position: chr21:42917736-42918013 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 218, 262

Conread position: 109-392
Cow position: chr21:443645-443927 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 217, 22

Conread position: 109-397
Cow position: chr21:1803141-1802850 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 44, 51

Conread position: 109-397
Cow position: chr21:10756854-10757143 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-397
Cow position: chr21:14462154-14461868 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 79, 68

Conread position: 109-397
Cow position: chr21:14797756-14797467 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 107

Conread position: 109-403
Cow position: chr21:3923855-3924150 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-403
Cow position: chr21:10045850-10046148 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 183, 71

Conread position: 109-405
Cow position: chr21:2847425-2847122 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 42

Conread position: 109-409
Cow position: chr21:6863060-6862765 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 217, 97

Conread position: 109-409
Cow position: chr21:17482372-17482667 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 292, 240

Conread position: 109-409
Cow position: chr21:21103661-21103963 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-412
Cow position: chr21:684101-684399 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 192, 80

Conread position: 109-412
Cow position: chr21:37191621-37191321 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 35

Conread position: 109-412
Cow position: chr21:40177997-40178308 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 201

Conread position: 109-413
Cow position: chr21:5840786-5841092 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 216, 85

Conread position: 109-413
Cow position: chr21:30904988-30904685 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 176

Conread position: 109-413
Cow position: chr21:31512328-31512022 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 204

Conread position: 109-413
Cow position: chr21:34684965-34685270 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 72

Conread position: 109-422
Cow position: chr21:11195746-11196057 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 71

Conread position: 109-422
Cow position: chr21:19702137-19702449 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 281

Conread position: 109-422
Cow position: chr21:31948505-31948819 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 263

Conread position: 109-422
Cow position: chr21:31950356-31950670 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 263

Conread position: 109-438
Cow position: chr21:23658153-23658485 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 37

Conread position: 109-441
Cow position: chr21:36399339-36399662 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 67, 23

Conread position: 109-446
Cow position: chr21:22945184-22945512 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 211
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 220

Conread position: 109-448
Cow position: chr21:22140729-22140392 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 239

Conread position: 109-449
Cow position: chr21:34591582-34591232 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 56

Conread position: 109-450
Cow position: chr21:8420283-8420600 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 217, 69

Conread position: 109-450
Cow position: chr21:14762901-14762554 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 303

Conread position: 109-450
Cow position: chr21:16293028-16293391 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 109-450
Cow position: chr21:17219006-17218666 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 25

Conread position: 109-450
Cow position: chr21:18979242-18978898 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 81

Conread position: 109-450
Cow position: chr21:24085967-24085622 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 54

Conread position: 109-450
Cow position: chr21:25297424-25297761 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 180

Conread position: 109-450
Cow position: chr21:25475747-25476079 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 107

Conread position: 109-450
Cow position: chr21:37352798-37352474 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 247, 67

Conread position: 109-457
Cow position: chr21:20549309-20548955 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 100

Conread position: 109-460
Cow position: chr21:19062311-19062634 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 109-460
Cow position: chr21:33993453-33993100 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 266

Conread position: 109-460
Cow position: chr21:46132383-46132019 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 308

Conread position: 109-463
Cow position: chr21:44219842-44220184 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 58, 196

Conread position: 109-469
Cow position: chr21:33316422-33316071 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 210
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 216, 146

Conread position: 109-470
Cow position: chr21:3782713-3783074 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 296

Conread position: 109-470
Cow position: chr21:26399842-26399481 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 296

Conread position: 109-478
Cow position: chr21:34254666-34254302 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 80

Conread position: 109-484
Cow position: chr21:4279248-4279615 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 22

Conread position: 109-484
Cow position: chr21:40479204-40479579 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-487
Cow position: chr21:21909968-21910346 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-488
Cow position: chr21:2709947-2709568 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-488
Cow position: chr21:27341972-27341612 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 66

Conread position: 109-488
Cow position: chr21:33770620-33770999 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-488
Cow position: chr21:34900618-34900997 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 263

Conread position: 109-495
Cow position: chr21:24082242-24081857 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 181

Conread position: 109-495
Cow position: chr21:47429283-47429669 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 166

Conread position: 109-497
Cow position: chr21:30566645-30567020 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 261
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 216, 55

Conread position: 109-500
Cow position: chr21:13111184-13110791 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 139

Conread position: 109-501
Cow position: chr21:25344489-25344872 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 76

Conread position: 109-503
Cow position: chr21:363266-363652 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 248

Conread position: 109-503
Cow position: chr21:13704073-13703682 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 65

Conread position: 109-503
Cow position: chr21:13728144-13727760 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 249
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 81

Conread position: 109-511
Cow position: chr21:23683155-23683560 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 274

Conread position: 109-513
Cow position: chr21:48086-48494 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 264

Conread position: 109-514
Cow position: chr21:150089-150492 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 306

Conread position: 109-514
Cow position: chr21:1196480-1196887 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 296

Conread position: 109-514
Cow position: chr21:5641895-5641488 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:5857523-5857118 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 261

Conread position: 109-514
Cow position: chr21:7047244-7046835 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:7525060-7525467 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:9209249-9209650 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 302

Conread position: 109-514
Cow position: chr21:10436783-10437189 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 60

Conread position: 109-514
Cow position: chr21:10571213-10571614 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 277

Conread position: 109-514
Cow position: chr21:10854199-10854608 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 298

Conread position: 109-514
Cow position: chr21:11509879-11510286 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:13735219-13734809 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 263

Conread position: 109-514
Cow position: chr21:16575504-16575097 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:17144761-17145168 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 296

Conread position: 109-514
Cow position: chr21:17539347-17539754 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:19614187-19614595 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 47

Conread position: 109-514
Cow position: chr21:19626767-19626357 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:26628710-26629117 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:26744344-26743921 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 279
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 177, 312

Conread position: 109-514
Cow position: chr21:27036391-27036798 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:29424001-29424399 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 201

Conread position: 109-514
Cow position: chr21:30134732-30135136 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 156

Conread position: 109-514
Cow position: chr21:30571137-30570730 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:33832035-33831638 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 181

Conread position: 109-514
Cow position: chr21:34074580-34074987 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:34251920-34251525 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 295

Conread position: 109-514
Cow position: chr21:34909805-34910211 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 60

Conread position: 109-514
Cow position: chr21:36376945-36377368 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 80, 125

Conread position: 109-514
Cow position: chr21:36505623-36505219 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 116

Conread position: 109-514
Cow position: chr21:36781068-36781470 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 169

Conread position: 109-514
Cow position: chr21:39429561-39429968 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 262

Conread position: 109-514
Cow position: chr21:39486331-39485925 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 117

Conread position: 109-514
Cow position: chr21:41795781-41795374 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:42558717-42559113 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 216

Conread position: 109-514
Cow position: chr21:45842060-45841651 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 264

Conread position: 109-514
Cow position: chr21:47140080-47139675 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-514
Cow position: chr21:47649284-47649687 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 71

Conread position: 109-516
Cow position: chr21:28512154-28512546 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 167

Conread position: 109-516
Cow position: chr21:33420103-33419706 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 56

Conread position: 109-516
Cow position: chr21:33933771-33933362 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 299

Conread position: 109-517
Cow position: chr21:4079967-4080377 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 234

Conread position: 109-517
Cow position: chr21:12366000-12366400 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 288

Conread position: 109-519
Cow position: chr21:34658651-34659054 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 32

Conread position: 109-520
Cow position: chr21:5596767-5597171 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 273
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 159

Conread position: 109-521
Cow position: chr21:15545749-15545341 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 95

Conread position: 109-521
Cow position: chr21:17412679-17412277 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 288

Conread position: 109-522
Cow position: chr21:33209812-33210225 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 174

Conread position: 109-531
Cow position: chr21:46912156-46912570 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 90

Conread position: 109-531
Cow position: chr21:48484827-48484415 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 82

Conread position: 109-532
Cow position: chr21:46973522-46973100 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 296
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 16, 92

Conread position: 109-534
Cow position: chr21:23672365-23672785 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 50

Conread position: 109-534
Cow position: chr21:39700463-39700033 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 265

Conread position: 109-535
Cow position: chr21:4998872-4998450 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 220

Conread position: 109-535
Cow position: chr21:17713926-17714353 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 279
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 215, 308

Conread position: 109-538
Cow position: chr21:2495558-2495134 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 174

Conread position: 109-538
Cow position: chr21:2877899-2877470 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 263

Conread position: 109-540
Cow position: chr21:27376063-27376493 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 35

Conread position: 109-542
Cow position: chr21:44331678-44331252 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 109

Conread position: 109-544
Cow position: chr21:5021081-5021516 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 296

Conread position: 109-549
Cow position: chr21:41957570-41957128 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 284

Conread position: 109-564
Cow position: chr21:9711102-9710644 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 101

Conread position: 109-568
Cow position: chr21:21216528-21216075 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 290

Conread position: 109-572
Cow position: chr21:21480566-21480114 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 109-575
Cow position: chr21:40244047-40244518 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 297

Conread position: 109-576
Cow position: chr21:15742490-15742015 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 321
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 280

Conread position: 109-578
Cow position: chr21:30897032-30897492 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 301
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 102

Conread position: 109-579
Cow position: chr21:27743354-27743826 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 247

Conread position: 109-579
Cow position: chr21:29942609-29943081 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 318
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 129

Conread position: 109-580
Cow position: chr21:32535598-32536055 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 58

Conread position: 109-581
Cow position: chr21:13632503-13632972 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 34

Conread position: 109-581
Cow position: chr21:27147611-27147138 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-583
Cow position: chr21:28477238-28477704 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 211

Conread position: 109-584
Cow position: chr21:4098502-4098955 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 321
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 178, 39

Conread position: 109-584
Cow position: chr21:4473405-4472935 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 84

Conread position: 109-584
Cow position: chr21:7597328-7596848 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 269

Conread position: 109-584
Cow position: chr21:16794953-16795426 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-584
Cow position: chr21:20370308-20370781 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-584
Cow position: chr21:30655582-30656055 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-584
Cow position: chr21:38848857-38848384 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-584
Cow position: chr21:47823659-47823191 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 58

Conread position: 109-585
Cow position: chr21:1179323-1178849 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-585
Cow position: chr21:2472834-2472359 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 262

Conread position: 109-585
Cow position: chr21:4585734-4585274 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 13

Conread position: 109-585
Cow position: chr21:5455377-5454908 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 223

Conread position: 109-585
Cow position: chr21:25382611-25383107 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 266

Conread position: 109-585
Cow position: chr21:26756780-26756310 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 23

Conread position: 109-585
Cow position: chr21:26875534-26876011 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 265

Conread position: 109-585
Cow position: chr21:36892289-36891818 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-586
Cow position: chr21:36225361-36225833 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 22

Conread position: 109-586
Cow position: chr21:44122668-44123143 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-588
Cow position: chr21:2938642-2939119 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-588
Cow position: chr21:13897806-13898274 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 190

Conread position: 109-588
Cow position: chr21:17411894-17411422 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 262

Conread position: 109-588
Cow position: chr21:21624027-21624504 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-588
Cow position: chr21:22100257-22099780 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-588
Cow position: chr21:24130699-24131155 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 109-588
Cow position: chr21:29954833-29955310 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-588
Cow position: chr21:31039739-31039262 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-588
Cow position: chr21:34391353-34390889 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 142

Conread position: 109-589
Cow position: chr21:28923755-28924196 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 112

Conread position: 109-589
Cow position: chr21:30250592-30250114 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 137

Conread position: 109-590
Cow position: chr21:750351-750828 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 262

Conread position: 109-590
Cow position: chr21:4189453-4189929 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 65

Conread position: 109-590
Cow position: chr21:4282251-4281787 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 183

Conread position: 109-590
Cow position: chr21:5153230-5153709 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 324

Conread position: 109-590
Cow position: chr21:6623762-6624245 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 52

Conread position: 109-590
Cow position: chr21:6765088-6764612 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 50

Conread position: 109-590
Cow position: chr21:10263653-10264121 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 138

Conread position: 109-590
Cow position: chr21:20575847-20575387 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 311
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 143

Conread position: 109-590
Cow position: chr21:24222926-24222449 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 23

Conread position: 109-590
Cow position: chr21:24698090-24698569 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 303

Conread position: 109-590
Cow position: chr21:26244551-26245002 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 323
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 157

Conread position: 109-590
Cow position: chr21:27863907-27863425 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 296

Conread position: 109-590
Cow position: chr21:28989225-28989698 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 170

Conread position: 109-590
Cow position: chr21:30849324-30848853 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 35

Conread position: 109-590
Cow position: chr21:31576121-31576584 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 328
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 200

Conread position: 109-590
Cow position: chr21:33901369-33901850 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 304

Conread position: 109-590
Cow position: chr21:36756221-36756688 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 159

Conread position: 109-590
Cow position: chr21:38900397-38900862 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 18

Conread position: 109-590
Cow position: chr21:38917848-38918295 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 330
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 339, 89

Conread position: 109-590
Cow position: chr21:48291419-48290964 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 319
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 63, 20

Conread position: 109-595
Cow position: chr21:642959-643419 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 45

Conread position: 109-595
Cow position: chr21:725275-724789 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 67

Conread position: 109-595
Cow position: chr21:2904850-2904383 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 278

Conread position: 109-595
Cow position: chr21:7672735-7673218 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 304

Conread position: 109-595
Cow position: chr21:20262721-20262240 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 280

Conread position: 109-595
Cow position: chr21:22855835-22856313 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 25

Conread position: 109-595
Cow position: chr21:27230178-27229696 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 39

Conread position: 109-595
Cow position: chr21:28210799-28211290 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 39

Conread position: 109-595
Cow position: chr21:29484578-29485077 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 166

Conread position: 109-595
Cow position: chr21:33263464-33263939 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 185

Conread position: 109-595
Cow position: chr21:43240477-43240958 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 22

Conread position: 109-595
Cow position: chr21:44281220-44280730 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 290

Conread position: 109-595
Cow position: chr21:44514880-44515359 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 14

Conread position: 109-596
Cow position: chr21:10075321-10074834 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 116

Conread position: 109-596
Cow position: chr21:18574457-18574944 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-596
Cow position: chr21:33709557-33709070 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 262

Conread position: 109-596
Cow position: chr21:39225005-39224518 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 262

Conread position: 109-596
Cow position: chr21:47978210-47978704 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 211

Conread position: 109-613
Cow position: chr21:2420118-2420610 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 197

Conread position: 109-629
Cow position: chr21:24607009-24607516 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 63

Conread position: 110-267
Cow position: chr21:2293248-2293091 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 97

Conread position: 110-285
Cow position: chr21:23603757-23603932 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 80

Conread position: 110-290
Cow position: chr21:1058413-1058601 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 110-290
Cow position: chr21:40128400-40128220 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 110-293
Cow position: chr21:26736697-26736506 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 108

Conread position: 110-295
Cow position: chr21:13303144-13303328 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 110-303
Cow position: chr21:3047278-3047471 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 110-303
Cow position: chr21:21000442-21000243 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 110-303
Cow position: chr21:31661671-31661868 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 101

Conread position: 110-313
Cow position: chr21:44761742-44761539 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 110-318
Cow position: chr21:31276335-31276543 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 13

Conread position: 110-327
Cow position: chr21:7666442-7666225 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 110-327
Cow position: chr21:19350918-19350701 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 110-334
Cow position: chr21:29999967-29999741 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 219, 0

Conread position: 110-341
Cow position: chr21:471237-471480 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 110-351
Cow position: chr21:1765592-1765346 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 57, 174

Conread position: 110-353
Cow position: chr21:6697478-6697234 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 66

Conread position: 110-363
Cow position: chr21:45275228-45275484 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 27

Conread position: 110-381
Cow position: chr21:33415177-33414905 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 229, 186

Conread position: 110-392
Cow position: chr21:4559129-4558846 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 197, 34

Conread position: 110-412
Cow position: chr21:12338780-12339086 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 142

Conread position: 110-413
Cow position: chr21:2871102-2870796 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 261

Conread position: 110-413
Cow position: chr21:4035376-4035077 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 57, 69

Conread position: 110-413
Cow position: chr21:23293540-23293237 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 93

Conread position: 110-422
Cow position: chr21:17208109-17208415 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 289, 137

Conread position: 110-450
Cow position: chr21:25603573-25603235 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 178

Conread position: 110-450
Cow position: chr21:32447156-32447495 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 295

Conread position: 110-450
Cow position: chr21:36711807-36712147 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 200

Conread position: 110-451
Cow position: chr21:3173730-3174062 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 60, 21

Conread position: 110-452
Cow position: chr21:22856794-22857136 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 46

Conread position: 110-468
Cow position: chr21:5595278-5595632 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 71

Conread position: 110-481
Cow position: chr21:13764593-13764950 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 243
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 61, 72

Conread position: 110-487
Cow position: chr21:17433638-17433266 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 138, 167

Conread position: 110-492
Cow position: chr21:7717173-7716793 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 81

Conread position: 110-497
Cow position: chr21:19957845-19958222 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 110-503
Cow position: chr21:21967935-21968319 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 254
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 82

Conread position: 110-505
Cow position: chr21:38867952-38867566 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 73, 38

Conread position: 110-507
Cow position: chr21:4732603-4732207 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 311

Conread position: 110-512
Cow position: chr21:13070250-13069847 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 274
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 145

Conread position: 110-513
Cow position: chr21:2514788-2515186 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 260

Conread position: 110-513
Cow position: chr21:4428292-4428697 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 277
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 89, 243

Conread position: 110-514
Cow position: chr21:21785473-21785069 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 295

Conread position: 110-514
Cow position: chr21:26835680-26835275 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 79

Conread position: 110-514
Cow position: chr21:27607749-27607343 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 295

Conread position: 110-533
Cow position: chr21:18935386-18935792 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 110-534
Cow position: chr21:17414907-17414515 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 282
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 379, 79

Conread position: 110-540
Cow position: chr21:2927619-2927161 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 302
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 143, 21

Conread position: 110-540
Cow position: chr21:47767769-47767338 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 295

Conread position: 110-548
Cow position: chr21:37517751-37517313 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 305

Conread position: 110-563
Cow position: chr21:5649520-5649966 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 237

Conread position: 110-572
Cow position: chr21:912347-911896 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 130

Conread position: 110-580
Cow position: chr21:9863011-9862564 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 318
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 199

Conread position: 110-585
Cow position: chr21:11143906-11143435 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 261

Conread position: 110-585
Cow position: chr21:33245546-33245068 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 12

Conread position: 110-590
Cow position: chr21:8126172-8125715 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 128

Conread position: 110-590
Cow position: chr21:10514426-10514894 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 185

Conread position: 110-590
Cow position: chr21:15976255-15976721 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 166

Conread position: 110-590
Cow position: chr21:18289278-18289751 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 70

Conread position: 110-590
Cow position: chr21:22719160-22718695 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 47

Conread position: 110-590
Cow position: chr21:24297146-24296680 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 46

Conread position: 110-590
Cow position: chr21:37706803-37706327 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 337
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 63, 69

Conread position: 111-283
Cow position: chr21:29855289-29855461 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 111-287
Cow position: chr21:37719925-37719736 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 111-295
Cow position: chr21:31926-32109 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 111-299
Cow position: chr21:38450067-38449871 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 0

Conread position: 111-313
Cow position: chr21:35573269-35573070 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 111-331
Cow position: chr21:168031-167809 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 80, 0

Conread position: 111-387
Cow position: chr21:48638128-48637854 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 25

Conread position: 111-392
Cow position: chr21:29704594-29704315 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 165

Conread position: 111-411
Cow position: chr21:45263405-45263108 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 111-413
Cow position: chr21:612152-611853 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 185

Conread position: 111-413
Cow position: chr21:9201802-9202106 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 121

Conread position: 111-413
Cow position: chr21:25158508-25158810 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 183

Conread position: 111-413
Cow position: chr21:36909436-36909743 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 147

Conread position: 111-438
Cow position: chr21:6025381-6025065 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 207
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 213, 48

Conread position: 111-450
Cow position: chr21:17452400-17452067 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 62, 153

Conread position: 111-462
Cow position: chr21:25598609-25598960 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 259

Conread position: 111-463
Cow position: chr21:26681323-26680983 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 186

Conread position: 111-470
Cow position: chr21:8981509-8981156 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 194

Conread position: 111-481
Cow position: chr21:14125674-14126028 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 218

Conread position: 111-488
Cow position: chr21:28599386-28599763 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 96

Conread position: 111-507
Cow position: chr21:30595135-30594734 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 11

Conread position: 111-510
Cow position: chr21:34301520-34301931 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 304

Conread position: 111-514
Cow position: chr21:451819-452224 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 260

Conread position: 111-514
Cow position: chr21:23900192-23899787 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 294

Conread position: 111-514
Cow position: chr21:26854748-26854343 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 260

Conread position: 111-514
Cow position: chr21:27287920-27288324 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 293

Conread position: 111-514
Cow position: chr21:28914748-28914345 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 239

Conread position: 111-520
Cow position: chr21:937667-938049 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 111-521
Cow position: chr21:17434705-17434296 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 268
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 17

Conread position: 111-525
Cow position: chr21:32297887-32297482 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 218

Conread position: 111-535
Cow position: chr21:34181610-34182035 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 218

Conread position: 111-542
Cow position: chr21:1780968-1781400 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 136

Conread position: 111-549
Cow position: chr21:393637-394071 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 56

Conread position: 111-557
Cow position: chr21:12616758-12617195 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 37

Conread position: 111-580
Cow position: chr21:13751002-13751471 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 294
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 24, 17

Conread position: 111-584
Cow position: chr21:7038248-7037777 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 260

Conread position: 111-585
Cow position: chr21:2366956-2367415 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 89

Conread position: 111-587
Cow position: chr21:39401209-39401678 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 53

Conread position: 111-589
Cow position: chr21:3236144-3236613 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 22

Conread position: 111-590
Cow position: chr21:3813852-3813395 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 174

Conread position: 111-590
Cow position: chr21:7582290-7581817 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 199

Conread position: 111-590
Cow position: chr21:33729049-33729518 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 79

Conread position: 111-590
Cow position: chr21:33997610-33997139 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 85

Conread position: 111-590
Cow position: chr21:48262745-48263223 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 166

Conread position: 111-595
Cow position: chr21:28442351-28442827 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 69

Conread position: 111-595
Cow position: chr21:29214540-29214065 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 172

Conread position: 111-628
Cow position: chr21:20925890-20925376 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 137

Conread position: 112-318
Cow position: chr21:6102708-6102501 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 173

Conread position: 112-323
Cow position: chr21:3467886-3468101 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 14

Conread position: 112-345
Cow position: chr21:28908214-28907988 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 180, 73

Conread position: 112-437
Cow position: chr21:12440565-12440896 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 210
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 271

Conread position: 112-540
Cow position: chr21:81686-82120 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 112-590
Cow position: chr21:17417139-17416671 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 297
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 155, 64

Conread position: 112-642
Cow position: chr21:15584787-15584275 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 163

Conread position: 113-413
Cow position: chr21:35389210-35388902 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 70, 181

Conread position: 113-417
Cow position: chr21:20588648-20588955 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 113-461
Cow position: chr21:8290026-8289677 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 113-585
Cow position: chr21:44108638-44109086 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 319
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 217, 91

Conread position: 115-518
Cow position: chr21:48108234-48107847 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 280
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 218, 111

Conread position: 116-381
Cow position: chr21:33579812-33580073 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 107, 60

Conread position: 116-473
Cow position: chr21:38691815-38692158 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 50

Conread position: 116-505
Cow position: chr21:16789341-16789730 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 376

Conread position: 116-514
Cow position: chr21:4898030-4897633 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 38

Conread position: 116-533
Cow position: chr21:25991456-25991040 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 278
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 159

Conread position: 116-569
Cow position: chr21:36163342-36162892 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 74

Conread position: 116-585
Cow position: chr21:23192898-23192429 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 289

Conread position: 116-585
Cow position: chr21:45971532-45971089 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 30

Conread position: 116-590
Cow position: chr21:28810635-28810174 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 173

Conread position: 117-281
Cow position: chr21:28910081-28909918 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 117-284
Cow position: chr21:9363423-9363250 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 146

Conread position: 117-293
Cow position: chr21:12802162-12801983 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 32, 51

Conread position: 117-313
Cow position: chr21:26557437-26557241 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 39

Conread position: 117-365
Cow position: chr21:9006201-9006451 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 209

Conread position: 117-365
Cow position: chr21:34618002-34618257 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 117-377
Cow position: chr21:12325654-12325919 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 132

Conread position: 117-405
Cow position: chr21:2906280-2905986 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 190

Conread position: 117-413
Cow position: chr21:12465971-12466271 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 261

Conread position: 117-413
Cow position: chr21:23971215-23970918 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 193
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 52, 104

Conread position: 117-488
Cow position: chr21:31158874-31159250 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 131

Conread position: 117-589
Cow position: chr21:16612250-16612712 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 273

Conread position: 118-379
Cow position: chr21:2657211-2657472 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 165

Conread position: 118-453
Cow position: chr21:26852871-26853213 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 97

Conread position: 118-522
Cow position: chr21:42464225-42463811 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 169

Conread position: 118-595
Cow position: chr21:33983188-33982712 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 288

Conread position: 119-284
Cow position: chr21:28625730-28625895 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 119-327
Cow position: chr21:17794576-17794365 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 188

Conread position: 119-510
Cow position: chr21:37924135-37924533 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 265
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 257

Conread position: 119-585
Cow position: chr21:25480212-25480681 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 252

Conread position: 120-514
Cow position: chr21:9743955-9743559 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 251

Conread position: 120-584
Cow position: chr21:37299088-37299544 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 275

Conread position: 121-507
Cow position: chr21:18934551-18934925 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 63, 20

Conread position: 123-309
Cow position: chr21:33154951-33155137 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 123-373
Cow position: chr21:3635103-3634847 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 117, 186

Conread position: 123-467
Cow position: chr21:46777346-46777006 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 251

Conread position: 123-595
Cow position: chr21:4794848-4795321 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 252

Conread position: 124-585
Cow position: chr21:30688561-30688105 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 266

Conread position: 126-339
Cow position: chr21:14238185-14238396 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 126-475
Cow position: chr21:20162165-20162512 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 229

Conread position: 126-514
Cow position: chr21:5790855-5791245 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 245

Conread position: 126-514
Cow position: chr21:24236743-24237132 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 244

Conread position: 128-514
Cow position: chr21:38651289-38650906 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 242

Conread position: 130-411
Cow position: chr21:220594-220885 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 32

Conread position: 130-590
Cow position: chr21:4399434-4399891 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 162

Conread position: 131-304
Cow position: chr21:18791103-18790925 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 166

Conread position: 131-365
Cow position: chr21:32574359-32574603 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 186

Conread position: 131-371
Cow position: chr21:10642236-10642473 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 212, 115

Conread position: 131-420
Cow position: chr21:3818746-3819035 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 67

Conread position: 131-450
Cow position: chr21:17262477-17262168 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 115

Conread position: 131-462
Cow position: chr21:16118132-16117802 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 112

Conread position: 131-469
Cow position: chr21:19668754-19668431 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 43

Conread position: 131-469
Cow position: chr21:30626547-30626211 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 15

Conread position: 131-507
Cow position: chr21:4569863-4569485 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 276

Conread position: 131-510
Cow position: chr21:13395186-13395563 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 264
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 147

Conread position: 131-514
Cow position: chr21:21963113-21963497 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 240

Conread position: 131-514
Cow position: chr21:24136553-24136937 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 182

Conread position: 131-514
Cow position: chr21:40267193-40266815 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 198, 277

Conread position: 131-515
Cow position: chr21:3920577-3920195 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 213

Conread position: 131-532
Cow position: chr21:45151996-45151587 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 60

Conread position: 131-535
Cow position: chr21:44671388-44671787 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 274

Conread position: 131-572
Cow position: chr21:16696005-16696443 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 203

Conread position: 131-579
Cow position: chr21:45474120-45473681 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 302
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 156, 130

Conread position: 131-585
Cow position: chr21:19363815-19363376 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 40

Conread position: 131-588
Cow position: chr21:25076753-25076298 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 301
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 64

Conread position: 131-599
Cow position: chr21:45916069-45915615 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 59

Conread position: 132-313
Cow position: chr21:42136208-42136034 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 132-468
Cow position: chr21:21964667-21964988 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 72, 0

Conread position: 132-498
Cow position: chr21:35899441-35899804 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 113

Conread position: 132-564
Cow position: chr21:16909691-16910129 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 276

Conread position: 132-579
Cow position: chr21:1990936-1991364 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 296
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 207

Conread position: 132-585
Cow position: chr21:29069690-29069244 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 27

Conread position: 132-590
Cow position: chr21:10151444-10151893 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 106

Conread position: 133-293
Cow position: chr21:9359311-9359484 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 37

Conread position: 133-327
Cow position: chr21:11024353-11024159 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 133-409
Cow position: chr21:27500432-27500709 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 238

Conread position: 133-436
Cow position: chr21:13533564-13533876 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 57, 249

Conread position: 133-481
Cow position: chr21:17475457-17475801 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 220
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 127, 149

Conread position: 133-514
Cow position: chr21:25193432-25193812 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 227

Conread position: 133-514
Cow position: chr21:28259634-28260015 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 284

Conread position: 133-572
Cow position: chr21:23984646-23984212 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 45

Conread position: 133-588
Cow position: chr21:36973177-36972724 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 238

Conread position: 133-590
Cow position: chr21:9415880-9416338 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 113

Conread position: 133-595
Cow position: chr21:37479596-37480050 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 148

Conread position: 134-313
Cow position: chr21:18601300-18601477 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 134-441
Cow position: chr21:38944021-38943724 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 146

Conread position: 134-576
Cow position: chr21:30990628-30990204 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 134-595
Cow position: chr21:23586501-23586977 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 112

Conread position: 135-472
Cow position: chr21:17370244-17369908 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 259

Conread position: 135-514
Cow position: chr21:33235437-33235818 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 298

Conread position: 136-361
Cow position: chr21:32190809-32191039 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 205, 0

Conread position: 136-578
Cow position: chr21:28429089-28429517 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 143

Conread position: 137-331
Cow position: chr21:40083443-40083642 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 95

Conread position: 138-312
Cow position: chr21:44074095-44074261 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 45, 0

Conread position: 138-362
Cow position: chr21:2984149-2983923 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 183, 0

Conread position: 138-585
Cow position: chr21:26633026-26632577 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 294
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 14, 120

Conread position: 139-413
Cow position: chr21:21411775-21411490 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 198

Conread position: 139-519
Cow position: chr21:23821813-23822187 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 9

Conread position: 139-534
Cow position: chr21:42190515-42190140 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 102

Conread position: 140-514
Cow position: chr21:41032925-41033295 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 192

Conread position: 141-514
Cow position: chr21:4665839-4665466 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 254
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 185, 230

Conread position: 141-584
Cow position: chr21:26071507-26071066 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 230

Conread position: 141-590
Cow position: chr21:30232054-30231606 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 48

Conread position: 141-603
Cow position: chr21:5344313-5344769 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 23

Conread position: 142-347
Cow position: chr21:33949894-33950104 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 14

Conread position: 142-514
Cow position: chr21:27065482-27065114 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 246
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 187, 162

Conread position: 144-478
Cow position: chr21:28029046-28029378 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 32

Conread position: 145-339
Cow position: chr21:22334849-22335041 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 17

Conread position: 146-579
Cow position: chr21:5137857-5137410 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 305
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 138, 261

Conread position: 148-293
Cow position: chr21:7067674-7067819 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 90

Conread position: 148-522
Cow position: chr21:22310545-22310922 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 240
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 181, 98

Conread position: 149-514
Cow position: chr21:32396028-32395661 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 104

Conread position: 150-588
Cow position: chr21:34955854-34956285 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 287
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 214, 41

Conread position: 152-281
Cow position: chr21:21143491-21143623 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 152-450
Cow position: chr21:23449232-23449524 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 82

Conread position: 152-595
Cow position: chr21:641243-641682 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 65

Conread position: 153-278
Cow position: chr21:28955140-28955263 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 40, 0

Conread position: 155-473
Cow position: chr21:22349802-22350121 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 176, 93

Conread position: 155-548
Cow position: chr21:17616657-17616270 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 128

Conread position: 155-588
Cow position: chr21:3364448-3364879 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 216

Conread position: 155-588
Cow position: chr21:13930796-13931227 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 286
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 171, 216

Conread position: 156-589
Cow position: chr21:16188149-16187720 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 119

Conread position: 157-319
Cow position: chr21:41281243-41281080 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 157-514
Cow position: chr21:43402329-43401974 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 167, 108

Conread position: 159-547
Cow position: chr21:42170293-42170684 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 86

Conread position: 159-590
Cow position: chr21:13048533-13048105 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 160-318
Cow position: chr21:665506-665346 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 127

Conread position: 160-351
Cow position: chr21:45250615-45250421 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 160-513
Cow position: chr21:39061512-39061867 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 246

Conread position: 160-576
Cow position: chr21:42905706-42905297 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 161-589
Cow position: chr21:19196503-19196077 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 161-595
Cow position: chr21:31691146-31691576 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 140

Conread position: 162-505
Cow position: chr21:20377694-20377363 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 27

Conread position: 162-590
Cow position: chr21:34010721-34010308 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 162-595
Cow position: chr21:42384172-42384603 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 84

Conread position: 163-327
Cow position: chr21:17439214-17439052 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 163-362
Cow position: chr21:17839700-17839897 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 162, 9

Conread position: 164-585
Cow position: chr21:8985217-8985635 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 235

Conread position: 164-589
Cow position: chr21:5392870-5392449 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 130

Conread position: 166-590
Cow position: chr21:20160354-20160764 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 223

Conread position: 167-362
Cow position: chr21:26421995-26421800 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 120

Conread position: 167-374
Cow position: chr21:15531040-15531242 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 16

Conread position: 167-481
Cow position: chr21:43631521-43631219 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 123, 0

Conread position: 167-581
Cow position: chr21:35823218-35822813 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 138, 37

Conread position: 167-590
Cow position: chr21:20045097-20044676 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 114

Conread position: 168-514
Cow position: chr21:13954184-13954533 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 15

Conread position: 168-596
Cow position: chr21:38120775-38121197 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 242

Conread position: 169-384
Cow position: chr21:42487209-42487423 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 178

Conread position: 169-470
Cow position: chr21:703494-703190 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 42, 237

Conread position: 169-585
Cow position: chr21:7132788-7132395 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 169-589
Cow position: chr21:24857984-24858402 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 236

Conread position: 170-313
Cow position: chr21:34586739-34586596 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 10

Conread position: 170-413
Cow position: chr21:37122379-37122133 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 164, 0

Conread position: 171-485
Cow position: chr21:17282378-17282689 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 226

Conread position: 172-289
Cow position: chr21:38628055-38628172 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 172-291
Cow position: chr21:28944730-28944611 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 172-382
Cow position: chr21:29225383-29225175 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 153, 108

Conread position: 172-450
Cow position: chr21:30354848-30355123 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 74

Conread position: 172-450
Cow position: chr21:36657256-36657519 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 153, 114

Conread position: 172-505
Cow position: chr21:24887673-24888015 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 100, 74

Conread position: 172-521
Cow position: chr21:17410979-17410635 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 158, 100

Conread position: 172-548
Cow position: chr21:1815284-1814911 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 69, 48

Conread position: 172-582
Cow position: chr21:19614853-19615254 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 74

Conread position: 172-595
Cow position: chr21:11645308-11644871 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 6

Conread position: 173-321
Cow position: chr21:45373784-45373932 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 173-513
Cow position: chr21:15905499-15905839 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 153, 198

Conread position: 173-514
Cow position: chr21:31436023-31436365 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 106, 171

Conread position: 176-312
Cow position: chr21:8617917-8618054 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 177-488
Cow position: chr21:19501705-19502017 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 15, 195

Conread position: 177-590
Cow position: chr21:6833733-6834137 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 217

Conread position: 178-595
Cow position: chr21:46263859-46264265 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 100

Conread position: 179-382
Cow position: chr21:5459710-5459509 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 148, 16

Conread position: 179-521
Cow position: chr21:26097727-26097377 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 222, 207

Conread position: 179-522
Cow position: chr21:32236982-32237318 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 105

Conread position: 179-542
Cow position: chr21:28993943-28993578 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 220

Conread position: 179-590
Cow position: chr21:42414416-42414009 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 106

Conread position: 180-400
Cow position: chr21:10624188-10623967 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 145, 0

Conread position: 180-487
Cow position: chr21:13763309-13763607 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 269, 141

Conread position: 180-512
Cow position: chr21:11759779-11759451 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 144, 14

Conread position: 180-588
Cow position: chr21:45372039-45372445 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 191

Conread position: 180-595
Cow position: chr21:34653770-34654168 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 70

Conread position: 181-590
Cow position: chr21:10726969-10727365 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 16

Conread position: 183-354
Cow position: chr21:43046624-43046454 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 138, 88

Conread position: 183-411
Cow position: chr21:10032044-10032275 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 142, 0

Conread position: 183-412
Cow position: chr21:42633961-42633734 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 183, 192

Conread position: 183-451
Cow position: chr21:876108-876373 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 143, 8

Conread position: 184-362
Cow position: chr21:18155701-18155880 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 142, 0

Conread position: 184-579
Cow position: chr21:2786104-2785699 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 166

Conread position: 185-303
Cow position: chr21:18800927-18800809 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 185-461
Cow position: chr21:47745984-47745711 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 15

Conread position: 185-469
Cow position: chr21:47760467-47760750 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 5

Conread position: 185-488
Cow position: chr21:35068051-35068354 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 141, 186

Conread position: 185-514
Cow position: chr21:661918-661587 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 141, 186

Conread position: 185-589
Cow position: chr21:18850537-18850138 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 205

Conread position: 185-595
Cow position: chr21:40786361-40786773 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 5

Conread position: 186-522
Cow position: chr21:36642597-36642929 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 213

Conread position: 186-555
Cow position: chr21:31702266-31701897 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 197

Conread position: 186-587
Cow position: chr21:46849429-46849042 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 266
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 139, 84

Conread position: 186-590
Cow position: chr21:395568-395956 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 116

Conread position: 186-590
Cow position: chr21:426482-426895 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 116

Conread position: 186-590
Cow position: chr21:41974689-41974286 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 219

Conread position: 187-579
Cow position: chr21:11228263-11227884 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 266
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 187

Conread position: 189-313
Cow position: chr21:17196815-17196692 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 189-411
Cow position: chr21:10657592-10657373 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 48

Conread position: 189-438
Cow position: chr21:40265526-40265769 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 210

Conread position: 190-364
Cow position: chr21:12331455-12331629 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 137, 96

Conread position: 190-510
Cow position: chr21:3987792-3987469 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 135, 215

Conread position: 191-415
Cow position: chr21:27406510-27406289 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 96

Conread position: 192-590
Cow position: chr21:46037534-46037148 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 254
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 133, 48

Conread position: 193-406
Cow position: chr21:4123614-4123401 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 133

Conread position: 193-450
Cow position: chr21:18712983-18713232 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 116, 0

Conread position: 193-450
Cow position: chr21:31278479-31278727 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 145, 90

Conread position: 193-495
Cow position: chr21:36762746-36763037 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 187

Conread position: 193-514
Cow position: chr21:18718366-18718688 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 132, 87

Conread position: 193-584
Cow position: chr21:24764964-24765364 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 233

Conread position: 193-584
Cow position: chr21:39561294-39561683 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 133, 178

Conread position: 193-588
Cow position: chr21:13168847-13169240 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 178

Conread position: 194-409
Cow position: chr21:40530604-40530394 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 131, 87

Conread position: 194-502
Cow position: chr21:12973553-12973251 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 60

Conread position: 194-514
Cow position: chr21:19439162-19439475 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 131, 20

Conread position: 194-530
Cow position: chr21:5009479-5009148 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 131, 183

Conread position: 195-535
Cow position: chr21:23785727-23786066 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 137

Conread position: 195-579
Cow position: chr21:48176528-48176901 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 252
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 137, 54

Conread position: 195-588
Cow position: chr21:11740431-11740033 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 8

Conread position: 196-354
Cow position: chr21:43317582-43317418 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 45

Conread position: 196-422
Cow position: chr21:5808721-5808492 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 196-532
Cow position: chr21:11707050-11706713 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 84

Conread position: 196-590
Cow position: chr21:13489343-13489734 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 109

Conread position: 198-413
Cow position: chr21:8219556-8219774 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 55, 8

Conread position: 198-584
Cow position: chr21:2491087-2490704 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 257
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 128, 8

Conread position: 198-590
Cow position: chr21:47802560-47802171 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 194

Conread position: 198-595
Cow position: chr21:2679261-2679652 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 82

Conread position: 199-588
Cow position: chr21:4092687-4093072 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 262
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 127, 81

Conread position: 200-585
Cow position: chr21:13128391-13128013 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 47, 7

Conread position: 201-581
Cow position: chr21:28734207-28733833 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 204

Conread position: 204-514
Cow position: chr21:2359600-2359906 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 121, 166

Conread position: 204-563
Cow position: chr21:25127318-25127665 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 75

Conread position: 204-590
Cow position: chr21:11639729-11640110 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 121, 37

Conread position: 204-595
Cow position: chr21:36297187-36297588 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 205-336
Cow position: chr21:31997432-31997565 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 205-336
Cow position: chr21:49678697-49678570 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 205-387
Cow position: chr21:13190146-13190328 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 90, 112

Conread position: 205-391
Cow position: chr21:36680420-36680603 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 132, 117

Conread position: 205-450
Cow position: chr21:43603513-43603272 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 87

Conread position: 205-573
Cow position: chr21:40058514-40058872 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 193

Conread position: 206-474
Cow position: chr21:697275-697013 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 121, 75

Conread position: 209-345
Cow position: chr21:19800019-19800157 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 209-413
Cow position: chr21:9732889-9732681 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 168

Conread position: 209-436
Cow position: chr21:46626782-46627021 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 52

Conread position: 209-590
Cow position: chr21:28998194-28997810 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 88, 197

Conread position: 209-590
Cow position: chr21:44755064-44754690 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 79

Conread position: 209-594
Cow position: chr21:43357548-43357162 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 122

Conread position: 211-399
Cow position: chr21:29954712-29954523 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 184, 0

Conread position: 212-514
Cow position: chr21:40108268-40107969 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 114, 38

Conread position: 212-590
Cow position: chr21:26648288-26647920 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 104

Conread position: 213-649
Cow position: chr21:12961196-12960749 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 126

Conread position: 214-403
Cow position: chr21:17204999-17204807 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 214-422
Cow position: chr21:8888584-8888793 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 112, 157

Conread position: 214-457
Cow position: chr21:21600942-21600699 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 111, 176

Conread position: 214-488
Cow position: chr21:4957472-4957198 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 112, 157

Conread position: 214-506
Cow position: chr21:25173588-25173882 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 112, 158

Conread position: 214-584
Cow position: chr21:1457903-1457535 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 112, 157

Conread position: 214-590
Cow position: chr21:30607385-30606999 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 200

Conread position: 214-590
Cow position: chr21:39889026-39888661 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 169

Conread position: 215-450
Cow position: chr21:36357844-36358076 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 124

Conread position: 215-514
Cow position: chr21:1529509-1529216 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 110, 80

Conread position: 215-584
Cow position: chr21:33632730-33632363 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 111, 156

Conread position: 215-651
Cow position: chr21:10882145-10882600 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 302
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 232

Conread position: 216-579
Cow position: chr21:36793602-36793972 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 116, 193

Conread position: 217-514
Cow position: chr21:39822089-39821790 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 109, 154

Conread position: 217-541
Cow position: chr21:23309760-23310080 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 69

Conread position: 217-549
Cow position: chr21:42023856-42024169 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 84

Conread position: 217-590
Cow position: chr21:33562735-33563096 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 101

Conread position: 218-327
Cow position: chr21:39313447-39313338 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 218-397
Cow position: chr21:8546495-8546306 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 71, 112

Conread position: 218-468
Cow position: chr21:17709550-17709797 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 85

Conread position: 218-590
Cow position: chr21:17511501-17511864 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 45

Conread position: 219-590
Cow position: chr21:17643240-17642896 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 107, 81

Conread position: 219-590
Cow position: chr21:36795323-36795691 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 184

Conread position: 220-514
Cow position: chr21:35919312-35919608 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 151

Conread position: 221-590
Cow position: chr21:23322358-23321990 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 110

Conread position: 221-590
Cow position: chr21:41155587-41155953 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 222-569
Cow position: chr21:44252102-44251776 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 76, 182

Conread position: 223-514
Cow position: chr21:36857356-36857642 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 81

Conread position: 223-579
Cow position: chr21:18783956-18783611 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 21

Conread position: 226-413
Cow position: chr21:5985029-5985218 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 102, 66

Conread position: 226-466
Cow position: chr21:41040595-41040836 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 173

Conread position: 226-512
Cow position: chr21:10966963-10967247 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 164

Conread position: 226-514
Cow position: chr21:27336552-27336842 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 145

Conread position: 226-518
Cow position: chr21:5482481-5482776 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 100, 188

Conread position: 226-519
Cow position: chr21:23478986-23478697 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 158, 15

Conread position: 226-590
Cow position: chr21:44114400-44114042 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 45, 107

Conread position: 228-408
Cow position: chr21:43251845-43251664 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 143

Conread position: 228-511
Cow position: chr21:4812001-4811722 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 221, 92

Conread position: 228-514
Cow position: chr21:32356622-32356335 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 143

Conread position: 228-518
Cow position: chr21:16166901-16166624 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 160

Conread position: 228-579
Cow position: chr21:24945165-24944818 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 174

Conread position: 230-424
Cow position: chr21:14597480-14597679 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 124

Conread position: 230-450
Cow position: chr21:14464299-14464528 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 186

Conread position: 230-569
Cow position: chr21:30650793-30650456 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 141

Conread position: 231-488
Cow position: chr21:26241563-26241815 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 99, 43

Conread position: 232-570
Cow position: chr21:15867051-15867383 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 92, 49

Conread position: 232-585
Cow position: chr21:33350481-33350824 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 234-514
Cow position: chr21:39418319-39418596 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 108

Conread position: 234-635
Cow position: chr21:3585618-3585235 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 80, 0

Conread position: 235-514
Cow position: chr21:34877538-34877258 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 13

Conread position: 235-548
Cow position: chr21:13035310-13034997 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 99, 172

Conread position: 235-594
Cow position: chr21:6713800-6713434 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 9, 245

Conread position: 235-595
Cow position: chr21:24598403-24598754 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 21, 36

Conread position: 236-590
Cow position: chr21:21223024-21223370 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 25, 10

Conread position: 237-511
Cow position: chr21:35395547-35395269 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 191

Conread position: 237-514
Cow position: chr21:20329084-20329359 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 54

Conread position: 237-590
Cow position: chr21:5971095-5970750 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 212, 86

Conread position: 240-590
Cow position: chr21:49700293-49699952 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 164

Conread position: 242-590
Cow position: chr21:23150273-23149933 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 146

Conread position: 246-514
Cow position: chr21:6192422-6192697 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 116

Conread position: 247-489
Cow position: chr21:34011352-34011107 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 57, 161

Conread position: 247-497
Cow position: chr21:25184038-25183789 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 124

Conread position: 247-514
Cow position: chr21:4267599-4267330 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 158

Conread position: 247-514
Cow position: chr21:17049343-17049605 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 151

Conread position: 247-564
Cow position: chr21:42939977-42940296 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 186

Conread position: 247-596
Cow position: chr21:39403787-39403429 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 169

Conread position: 250-513
Cow position: chr21:13439995-13440252 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 36

Conread position: 251-464
Cow position: chr21:24348419-24348632 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 75, 120

Conread position: 251-486
Cow position: chr21:13256550-13256789 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 37, 161

Conread position: 252-525
Cow position: chr21:13410067-13409798 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 75, 153

Conread position: 252-583
Cow position: chr21:5636965-5636642 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 78, 119

Conread position: 252-585
Cow position: chr21:46242477-46242153 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 221
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 195, 17

Conread position: 254-416
Cow position: chr21:29015131-29014970 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 31

Conread position: 255-514
Cow position: chr21:37538871-37538610 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 116

Conread position: 255-584
Cow position: chr21:30059685-30059358 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 116

Conread position: 255-584
Cow position: chr21:41235952-41235625 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 116

Conread position: 256-595
Cow position: chr21:40899096-40899434 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 149

Conread position: 258-465
Cow position: chr21:28907890-28907683 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 119

Conread position: 258-520
Cow position: chr21:20426302-20426548 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 41, 0

Conread position: 258-584
Cow position: chr21:17948163-17947839 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 212
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 113

Conread position: 260-522
Cow position: chr21:8618038-8618300 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 25, 32

Conread position: 260-584
Cow position: chr21:26480667-26480988 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 209
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 53

Conread position: 261-413
Cow position: chr21:30257939-30257784 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 261-540
Cow position: chr21:15445314-15445030 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 69, 183

Conread position: 261-590
Cow position: chr21:41878241-41878559 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 110

Conread position: 264-590
Cow position: chr21:33490-33807 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 20

Conread position: 265-517
Cow position: chr21:42348909-42348656 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 106

Conread position: 265-589
Cow position: chr21:27569387-27569082 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 7

Conread position: 265-595
Cow position: chr21:27124359-27124026 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 120

Conread position: 266-411
Cow position: chr21:19562962-19563109 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 266-520
Cow position: chr21:9278138-9278402 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 143

Conread position: 267-627
Cow position: chr21:8351530-8351187 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 30

Conread position: 269-549
Cow position: chr21:37361701-37361426 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 23

Conread position: 269-590
Cow position: chr21:14452000-14452322 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 23

Conread position: 270-510
Cow position: chr21:13585282-13585064 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 270-548
Cow position: chr21:18781614-18781893 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 177
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 59, 138

Conread position: 271-449
Cow position: chr21:11877159-11877331 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 272-590
Cow position: chr21:28626017-28626329 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 84

Conread position: 274-488
Cow position: chr21:24797473-24797674 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 276-512
Cow position: chr21:13316162-13316397 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 130

Conread position: 277-585
Cow position: chr21:47067108-47066815 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 7, 55

Conread position: 279-577
Cow position: chr21:37282092-37282377 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 123

Conread position: 279-590
Cow position: chr21:31662243-31662555 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 51, 120

Conread position: 282-522
Cow position: chr21:13303605-13303844 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 108

Conread position: 282-590
Cow position: chr21:23535499-23535797 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 88

Conread position: 284-590
Cow position: chr21:40133944-40134245 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 7

Conread position: 285-513
Cow position: chr21:21652258-21652487 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 164, 119

Conread position: 286-590
Cow position: chr21:30150478-30150175 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 13

Conread position: 287-546
Cow position: chr21:43300866-43300606 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 62

Conread position: 287-592
Cow position: chr21:41579541-41579846 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 5

Conread position: 290-588
Cow position: chr21:45330814-45330517 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 40, 115

Conread position: 291-584
Cow position: chr21:18378640-18378925 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 216, 107

Conread position: 291-589
Cow position: chr21:1058872-1059166 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 159, 107

Conread position: 291-590
Cow position: chr21:6051301-6051591 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 113

Conread position: 291-590
Cow position: chr21:7067839-7068140 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 249

Conread position: 291-590
Cow position: chr21:33947449-33947161 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 183, 38

Conread position: 291-590
Cow position: chr21:35061883-35062175 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 114

Conread position: 291-635
Cow position: chr21:7709959-7710295 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 100

Conread position: 292-589
Cow position: chr21:22860798-22861089 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 105

Conread position: 292-590
Cow position: chr21:3498294-3498581 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 98

Conread position: 292-590
Cow position: chr21:19258622-19258910 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 124

Conread position: 293-560
Cow position: chr21:21143678-21143959 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 260

Conread position: 293-572
Cow position: chr21:18780173-18779901 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 73, 30

Conread position: 293-584
Cow position: chr21:8549478-8549764 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 23

Conread position: 293-585
Cow position: chr21:12801947-12801666 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 36

Conread position: 293-589
Cow position: chr21:18828514-18828215 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 125

Conread position: 293-590
Cow position: chr21:34739646-34739932 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 199, 37

Conread position: 293-590
Cow position: chr21:45355633-45355921 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 113

Conread position: 293-595
Cow position: chr21:29002365-29002062 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 115

Conread position: 294-595
Cow position: chr21:47764314-47764022 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 198, 99

Conread position: 295-532
Cow position: chr21:5425780-5426006 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 297-569
Cow position: chr21:31676299-31676566 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 81

Conread position: 297-595
Cow position: chr21:18845214-18844917 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 41, 61

Conread position: 298-488
Cow position: chr21:42465631-42465820 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 108

Conread position: 300-585
Cow position: chr21:21077133-21077409 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 58

Conread position: 300-589
Cow position: chr21:35569580-35569296 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 72, 29

Conread position: 300-590
Cow position: chr21:42135820-42135528 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 26, 105

Conread position: 301-575
Cow position: chr21:42145721-42145992 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 115

Conread position: 301-590
Cow position: chr21:41620924-41621213 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 105

Conread position: 302-531
Cow position: chr21:31277627-31277852 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 36, 54

Conread position: 302-580
Cow position: chr21:34565407-34565131 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 69

Conread position: 303-589
Cow position: chr21:28443573-28443287 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 105

Conread position: 303-595
Cow position: chr21:32559547-32559270 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 80

Conread position: 304-589
Cow position: chr21:33727654-33727376 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 99

Conread position: 305-541
Cow position: chr21:33791559-33791322 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 33, 90

Conread position: 305-590
Cow position: chr21:13365150-13365431 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 30, 98

Conread position: 306-492
Cow position: chr21:13163703-13163882 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 142, 28

Conread position: 306-521
Cow position: chr21:31253345-31253566 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 114

Conread position: 306-572
Cow position: chr21:42459737-42459466 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 257

Conread position: 306-589
Cow position: chr21:10601558-10601288 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 75

Conread position: 306-590
Cow position: chr21:3381271-3380990 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 133, 83

Conread position: 306-590
Cow position: chr21:3763927-3763654 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 13

Conread position: 306-590
Cow position: chr21:5426756-5427028 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 142, 19

Conread position: 306-590
Cow position: chr21:35996982-35997264 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 94

Conread position: 306-590
Cow position: chr21:41597625-41597899 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 93

Conread position: 306-595
Cow position: chr21:45850900-45850609 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 186, 97

Conread position: 307-553
Cow position: chr21:17428314-17428551 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 43

Conread position: 307-553
Cow position: chr21:22353419-22353182 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 43

Conread position: 307-590
Cow position: chr21:1591362-1591642 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 94, 22

Conread position: 307-590
Cow position: chr21:17193949-17193663 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 92

Conread position: 307-590
Cow position: chr21:18942018-18941746 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 54

Conread position: 308-587
Cow position: chr21:40589671-40589399 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 21, 91

Conread position: 308-590
Cow position: chr21:6102457-6102173 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 122

Conread position: 308-595
Cow position: chr21:47465309-47465023 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 73

Conread position: 309-492
Cow position: chr21:4268686-4268867 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 90

Conread position: 311-589
Cow position: chr21:18842423-18842150 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 106

Conread position: 312-540
Cow position: chr21:37345286-37345056 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 101

Conread position: 312-589
Cow position: chr21:15610971-15611232 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 148, 13

Conread position: 313-581
Cow position: chr21:30592485-30592225 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 313-585
Cow position: chr21:28190845-28191117 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 93

Conread position: 313-590
Cow position: chr21:46143760-46144047 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 151

Conread position: 314-590
Cow position: chr21:15911218-15911491 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 76

Conread position: 314-595
Cow position: chr21:13488337-13488622 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 56

Conread position: 315-589
Cow position: chr21:39450349-39450074 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 22, 9

Conread position: 315-595
Cow position: chr21:802475-802222 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 74

Conread position: 315-596
Cow position: chr21:9990333-9990606 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 45

Conread position: 316-522
Cow position: chr21:45375436-45375645 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 75, 134

Conread position: 317-525
Cow position: chr21:29979935-29979732 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 73

Conread position: 318-473
Cow position: chr21:35897304-35897454 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 12, 87

Conread position: 319-587
Cow position: chr21:49662294-49662036 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 53

Conread position: 319-590
Cow position: chr21:18790733-18790474 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 71

Conread position: 321-595
Cow position: chr21:41198586-41198304 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 84

Conread position: 325-540
Cow position: chr21:47861024-47861239 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 87

Conread position: 325-590
Cow position: chr21:27146162-27145904 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 99

Conread position: 325-610
Cow position: chr21:10007811-10007528 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 58

Conread position: 326-590
Cow position: chr21:21169664-21169404 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 122, 63

Conread position: 326-590
Cow position: chr21:32339906-32339652 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 122, 57

Conread position: 327-516
Cow position: chr21:7825342-7825160 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 165, 21

Conread position: 335-584
Cow position: chr21:10114489-10114248 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 35

Conread position: 335-587
Cow position: chr21:23311105-23310867 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 20

Conread position: 335-589
Cow position: chr21:27624552-27624785 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 163, 22

Conread position: 338-589
Cow position: chr21:18800686-18800452 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 340-590
Cow position: chr21:10633796-10633549 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 108, 58

Conread position: 343-590
Cow position: chr21:24642366-24642609 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 53

Conread position: 349-595
Cow position: chr21:18041989-18041752 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 147, 40

Conread position: 350-590
Cow position: chr21:957521-957761 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 8, 57

Conread position: 356-590
Cow position: chr21:11359898-11360124 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 357-590
Cow position: chr21:12462109-12461879 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 47

Conread position: 358-590
Cow position: chr21:20152810-20153044 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 46

Conread position: 359-518
Cow position: chr21:14515709-14515870 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 56

Conread position: 359-590
Cow position: chr21:29978899-29978672 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 112

Conread position: 368-585
Cow position: chr21:46911-47123 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 39

Conread position: 368-588
Cow position: chr21:17856416-17856628 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 126, 37

Conread position: 368-589
Cow position: chr21:20260448-20260232 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 126, 21

Conread position: 369-540
Cow position: chr21:27810278-27810448 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 38

Conread position: 370-595
Cow position: chr21:20192777-20192992 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 19

Conread position: 372-585
Cow position: chr21:30222218-30222428 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 35

Conread position: 389-595
Cow position: chr21:22465085-22465286 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 116

Conread position: 395-595
Cow position: chr21:35354429-35354626 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 11

Conread position: 398-595
Cow position: chr21:4280775-4280577 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 85

Conread position: 399-590
Cow position: chr21:10561688-10561495 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 132

Conread position: 400-585
Cow position: chr21:30835261-30835450 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 146

Conread position: 402-595
Cow position: chr21:45262911-45262715 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 413-590
Cow position: chr21:31090508-31090339 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 70

Conread position: 415-589
Cow position: chr21:45906707-45906536 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 114

Conread position: 419-595
Cow position: chr21:33360116-33359942 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 108

Conread position: 422-585
Cow position: chr21:47719378-47719216 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 61

Conread position: 426-589
Cow position: chr21:44214049-44214214 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 68, 100

Conread position: 428-595
Cow position: chr21:16569828-16569996 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 98

Conread position: 433-583
Cow position: chr21:27079907-27079755 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 437-589
Cow position: chr21:12339575-12339728 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 33

Conread position: 438-595
Cow position: chr21:297689-297849 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 45

Conread position: 443-590
Cow position: chr21:35899786-35899932 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 83

Conread position: 447-583
Cow position: chr21:41598064-41598201 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 86

Show alignments to all cow chromosomes.