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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8018I16.3
        

               
Conread position:
               
69-451
               

               
Cow position:
               
chr23:2520550-2520165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
83-584
               

               
Cow position:
               
chr23:3825299-3824800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 288
               

               
Conread position:
               
86-290
               

               
Cow position:
               
chr23:36198773-36198977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
97-290
               

               
Cow position:
               
chr23:26795677-26795484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
98-449
               

               
Cow position:
               
chr23:15657257-15656915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
101-542
               

               
Cow position:
               
chr23:16610272-16609826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
102-278
               

               
Cow position:
               
chr23:31602203-31602026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 90
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr23:11814104-11813912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
102-290
               

               
Cow position:
               
chr23:3969059-3968874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
102-303
               

               
Cow position:
               
chr23:7221710-7221500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 164
               

               
Conread position:
               
102-312
               

               
Cow position:
               
chr23:3282839-3282631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
102-347
               

               
Cow position:
               
chr23:31277253-31277499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
102-381
               

               
Cow position:
               
chr23:7374427-7374698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 14
               

               
Conread position:
               
102-408
               

               
Cow position:
               
chr23:4067661-4067967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 180
               

               
Conread position:
               
102-438
               

               
Cow position:
               
chr23:20605759-20605399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
24, 334
               

               
Conread position:
               
102-444
               

               
Cow position:
               
chr23:5691224-5690876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
102-446
               

               
Cow position:
               
chr23:12003818-12004167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
102-450
               

               
Cow position:
               
chr23:14566186-14565829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
65, 312
               

               
Conread position:
               
102-500
               

               
Cow position:
               
chr23:2320192-2319793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 269
               

               
Conread position:
               
102-579
               

               
Cow position:
               
chr23:1535867-1536337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 20
               

               
Conread position:
               
102-583
               

               
Cow position:
               
chr23:7844835-7845313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 14
               

               
Conread position:
               
102-588
               

               
Cow position:
               
chr23:4339071-4338586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
102-590
               

               
Cow position:
               
chr23:2531794-2531321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
104-280
               

               
Cow position:
               
chr23:32114174-32114346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
104-289
               

               
Cow position:
               
chr23:16237818-16237625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
104-541
               

               
Cow position:
               
chr23:37191036-37190605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 194
               

               
Conread position:
               
105-337
               

               
Cow position:
               
chr23:30165722-30165500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
105-409
               

               
Cow position:
               
chr23:28076616-28076311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 266
               

               
Conread position:
               
105-590
               

               
Cow position:
               
chr23:18698480-18697999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 301
               

               
Conread position:
               
106-510
               

               
Cow position:
               
chr23:16495521-16495117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 152
               

               
Conread position:
               
106-588
               

               
Cow position:
               
chr23:26840992-26841449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 182
               

               
Conread position:
               
107-293
               

               
Cow position:
               
chr23:4517294-4517481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
107-316
               

               
Cow position:
               
chr23:26632065-26632271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
107-508
               

               
Cow position:
               
chr23:29441452-29441047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 299
               

               
Conread position:
               
107-513
               

               
Cow position:
               
chr23:39389813-39390221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 298
               

               
Conread position:
               
107-514
               

               
Cow position:
               
chr23:7791364-7790965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
342, 237
               

               
Conread position:
               
107-517
               

               
Cow position:
               
chr23:3727849-3727439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 76
               

               
Conread position:
               
107-547
               

               
Cow position:
               
chr23:29447493-29447057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 292
               

               
Conread position:
               
107-580
               

               
Cow position:
               
chr23:5151528-5152010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 90
               

               
Conread position:
               
107-585
               

               
Cow position:
               
chr23:2311997-2311521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 264
               

               
Conread position:
               
108-290
               

               
Cow position:
               
chr23:21343750-21343564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr23:11044734-11044916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
108-422
               

               
Cow position:
               
chr23:10936534-10936219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 235
               

               
Conread position:
               
108-514
               

               
Cow position:
               
chr23:8708154-8708562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 263
               

               
Conread position:
               
108-514
               

               
Cow position:
               
chr23:15020676-15021084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 263
               

               
Conread position:
               
108-514
               

               
Cow position:
               
chr23:25352123-25352531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 303
               

               
Conread position:
               
108-514
               

               
Cow position:
               
chr23:30889198-30889588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 70
               

               
Conread position:
               
108-573
               

               
Cow position:
               
chr23:16170243-16170703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
108-585
               

               
Cow position:
               
chr23:36129349-36128887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 167
               

               
Conread position:
               
108-590
               

               
Cow position:
               
chr23:6720726-6720254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 86
               

               
Conread position:
               
108-590
               

               
Cow position:
               
chr23:8005804-8006270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 173
               

               
Conread position:
               
108-590
               

               
Cow position:
               
chr23:11844854-11845303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 46
               

               
Conread position:
               
108-590
               

               
Cow position:
               
chr23:39775261-39775753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 310
               

               
Conread position:
               
108-590
               

               
Cow position:
               
chr23:40502938-40502489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 48
               

               
Conread position:
               
108-595
               

               
Cow position:
               
chr23:16665017-16664536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 141
               

               
Conread position:
               
109-239
               

               
Cow position:
               
chr23:25192651-25192521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-262
               

               
Cow position:
               
chr23:40688779-40688932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-274
               

               
Cow position:
               
chr23:21659503-21659677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
109-280
               

               
Cow position:
               
chr23:3786195-3786366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr23:22936059-22936228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr23:24562337-24562161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr23:31194636-31194464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr23:31423082-31422906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
109-282
               

               
Cow position:
               
chr23:9599081-9599254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
162, 168
               

               
Conread position:
               
109-287
               

               
Cow position:
               
chr23:13359134-13359313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
109-287
               

               
Cow position:
               
chr23:29033792-29033964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 118
               

               
Conread position:
               
109-290
               

               
Cow position:
               
chr23:5539254-5539081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
132, 102
               

               
Conread position:
               
109-290
               

               
Cow position:
               
chr23:25358238-25358423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
109-290
               

               
Cow position:
               
chr23:25665060-25664880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 138
               

               
Conread position:
               
109-293
               

               
Cow position:
               
chr23:21395049-21394860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
109-293
               

               
Cow position:
               
chr23:25580624-25580441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
109-301
               

               
Cow position:
               
chr23:5416778-5416976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
109-303
               

               
Cow position:
               
chr23:9393131-9392932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
109-309
               

               
Cow position:
               
chr23:3302618-3302816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
109-312
               

               
Cow position:
               
chr23:20025705-20025906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr23:4005464-4005665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr23:19535221-19535017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr23:31609911-31609707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr23:40141856-40141654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
109-314
               

               
Cow position:
               
chr23:13649199-13648994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr23:4100641-4100849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-322
               

               
Cow position:
               
chr23:22606047-22605832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
109-325
               

               
Cow position:
               
chr23:23192684-23192470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
109-326
               

               
Cow position:
               
chr23:13408851-13409068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr23:770736-770518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr23:10960722-10960937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr23:8323516-8323744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 214
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr23:27037376-27037600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
109-365
               

               
Cow position:
               
chr23:35941779-35942044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
191, 47
               

               
Conread position:
               
109-373
               

               
Cow position:
               
chr23:19316448-19316184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-382
               

               
Cow position:
               
chr23:26824543-26824815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 174
               

               
Conread position:
               
109-386
               

               
Cow position:
               
chr23:26230877-26231151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
217, 159
               

               
Conread position:
               
109-390
               

               
Cow position:
               
chr23:19737579-19737291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
109-396
               

               
Cow position:
               
chr23:20980397-20980684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 69
               

               
Conread position:
               
109-397
               

               
Cow position:
               
chr23:7311423-7311712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
109-404
               

               
Cow position:
               
chr23:5441680-5441972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
231, 220
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr23:14910674-14910374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 238
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr23:20734058-20734359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 262
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr23:29699549-29699239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
54, 301
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr23:35937574-35937872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 174
               

               
Conread position:
               
109-412
               

               
Cow position:
               
chr23:3328359-3328057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 288
               

               
Conread position:
               
109-413
               

               
Cow position:
               
chr23:15215091-15214788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
289, 211
               

               
Conread position:
               
109-413
               

               
Cow position:
               
chr23:19967177-19967486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
109-413
               

               
Cow position:
               
chr23:22170669-22170976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
219, 280
               

               
Conread position:
               
109-415
               

               
Cow position:
               
chr23:14575975-14576284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-421
               

               
Cow position:
               
chr23:9222910-9223209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
132, 125
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr23:3549432-3549118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr23:30768261-30768577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr23:38934470-38934152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 108
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr23:39745623-39745937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-423
               

               
Cow position:
               
chr23:31606191-31606506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-446
               

               
Cow position:
               
chr23:9712664-9712998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 281
               

               
Conread position:
               
109-447
               

               
Cow position:
               
chr23:36159108-36159447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 47
               

               
Conread position:
               
109-449
               

               
Cow position:
               
chr23:5883066-5883409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr23:2369544-2369884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
216, 250
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr23:31395384-31395043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 153
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr23:31585065-31585405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-451
               

               
Cow position:
               
chr23:11209547-11209899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 131
               

               
Conread position:
               
109-460
               

               
Cow position:
               
chr23:1696380-1696722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 177
               

               
Conread position:
               
109-461
               

               
Cow position:
               
chr23:11564806-11564441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 217
               

               
Conread position:
               
109-462
               

               
Cow position:
               
chr23:3485204-3485557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-473
               

               
Cow position:
               
chr23:2791012-2790650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 124
               

               
Conread position:
               
109-473
               

               
Cow position:
               
chr23:37198564-37198203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 172
               

               
Conread position:
               
109-473
               

               
Cow position:
               
chr23:40553378-40553014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 241
               

               
Conread position:
               
109-477
               

               
Cow position:
               
chr23:11973406-11973776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 178
               

               
Conread position:
               
109-480
               

               
Cow position:
               
chr23:18371362-18371002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 113
               

               
Conread position:
               
109-481
               

               
Cow position:
               
chr23:2470148-2470510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
217, 187
               

               
Conread position:
               
109-485
               

               
Cow position:
               
chr23:35926149-35926515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
109-488
               

               
Cow position:
               
chr23:671933-672312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-488
               

               
Cow position:
               
chr23:14385945-14385566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-492
               

               
Cow position:
               
chr23:26741900-26741527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 283
               

               
Conread position:
               
109-500
               

               
Cow position:
               
chr23:8697997-8698379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 188
               

               
Conread position:
               
109-502
               

               
Cow position:
               
chr23:3745158-3745542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
109-504
               

               
Cow position:
               
chr23:40633626-40633230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 22
               

               
Conread position:
               
109-505
               

               
Cow position:
               
chr23:20586169-20585775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 268
               

               
Conread position:
               
109-507
               

               
Cow position:
               
chr23:14958129-14957726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
109-507
               

               
Cow position:
               
chr23:32007666-32007271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
216, 281
               

               
Conread position:
               
109-507
               

               
Cow position:
               
chr23:40734776-40734383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 296
               

               
Conread position:
               
109-510
               

               
Cow position:
               
chr23:14266082-14266478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 262
               

               
Conread position:
               
109-510
               

               
Cow position:
               
chr23:21351192-21350790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 241
               

               
Conread position:
               
109-510
               

               
Cow position:
               
chr23:24120318-24120720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-510
               

               
Cow position:
               
chr23:27402897-27403294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 215
               

               
Conread position:
               
109-510
               

               
Cow position:
               
chr23:32877204-32876819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
217, 171
               

               
Conread position:
               
109-513
               

               
Cow position:
               
chr23:11459479-11459065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 304
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:221626-222022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 91
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:610464-610871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:1113715-1114122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:1959890-1960290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 89
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:3716925-3717335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 303
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:3877416-3877013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 296
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:4080089-4079681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 263
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:4273733-4274139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 50
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:4636588-4636179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 299
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:4856085-4855677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 263
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:6442732-6442325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 70
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:7494377-7494784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:7852402-7851995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 302
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:9267100-9266693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:10840633-10841040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:11070827-11071234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:11080148-11080555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:11344255-11344661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:11409708-11409301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 263
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:15764098-15764495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
217, 84
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:18655437-18655851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:19493616-19494023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 296
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:21772145-21771738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:22143263-22142858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:24098889-24099295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 192
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:26798133-26797719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 80
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:26829006-26829405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 232
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:27314506-27314913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:27734976-27735381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:28622135-28621728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:29043547-29043954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:30633829-30633426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 296
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:31127053-31126646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:31353898-31354305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 296
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:32650524-32650115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 297
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:35284757-35284350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:36027489-36027088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 80
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:39747799-39748208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 266
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:39784520-39784927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr23:40774091-40774498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-515
               

               
Cow position:
               
chr23:4437371-4437777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 95
               

               
Conread position:
               
109-520
               

               
Cow position:
               
chr23:9874237-9874628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
109-522
               

               
Cow position:
               
chr23:1640362-1640773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 281
               

               
Conread position:
               
109-525
               

               
Cow position:
               
chr23:1745233-1745647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
109-525
               

               
Cow position:
               
chr23:28916091-28916509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 274
               

               
Conread position:
               
109-530
               

               
Cow position:
               
chr23:30656610-30656204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
109-534
               

               
Cow position:
               
chr23:22530850-22530442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 33
               

               
Conread position:
               
109-540
               

               
Cow position:
               
chr23:344624-344195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 169
               

               
Conread position:
               
109-543
               

               
Cow position:
               
chr23:1131654-1132094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
109-544
               

               
Cow position:
               
chr23:5623817-5623383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 296
               

               
Conread position:
               
109-556
               

               
Cow position:
               
chr23:28306608-28307055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 93
               

               
Conread position:
               
109-561
               

               
Cow position:
               
chr23:18204036-18204485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 193
               

               
Conread position:
               
109-565
               

               
Cow position:
               
chr23:406605-406170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 81
               

               
Conread position:
               
109-569
               

               
Cow position:
               
chr23:18802722-18802264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 290
               

               
Conread position:
               
109-579
               

               
Cow position:
               
chr23:18367242-18367716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
109-580
               

               
Cow position:
               
chr23:644862-645345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
109-580
               

               
Cow position:
               
chr23:39028345-39028797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 222
               

               
Conread position:
               
109-582
               

               
Cow position:
               
chr23:7835942-7835472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 74
               

               
Conread position:
               
109-582
               

               
Cow position:
               
chr23:14126105-14126589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 99
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr23:977287-976812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr23:2723509-2723982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr23:3827327-3826854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr23:25380845-25381318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr23:27423628-27424101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr23:40710684-40711152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr23:4267199-4267671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr23:4544554-4544100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
217, 142
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr23:5458502-5458977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr23:9268140-9268605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 296
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr23:10852606-10853077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 172
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr23:10873899-10873424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 263
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr23:13520009-13520470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 196
               

               
Conread position:
               
109-587
               

               
Cow position:
               
chr23:16246295-16246756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 139
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr23:2528634-2528158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 47
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr23:3873522-3873045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr23:6593165-6592675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 297
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr23:1670468-1670929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 140
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr23:8911030-8911489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 134
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr23:10554460-10553982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 295
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr23:13511288-13511749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr23:13598905-13599369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 137
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr23:15710528-15710052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr23:16072780-16073269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 398
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr23:21789220-21788740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 296
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr23:27564143-27563674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 133
               

               
Conread position:
               
109-593
               

               
Cow position:
               
chr23:34315417-34314924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 209
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr23:1289853-1290331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 177
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr23:8959150-8959629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 228
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr23:11473954-11473474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 96
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr23:12864451-12864936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 262
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr23:3734685-3734198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-615
               

               
Cow position:
               
chr23:9712056-9711524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
109-632
               

               
Cow position:
               
chr23:416715-417216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 182
               

               
Conread position:
               
109-635
               

               
Cow position:
               
chr23:22804280-22804796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 91
               

               
Conread position:
               
109-654
               

               
Cow position:
               
chr23:22031685-22031141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
110-280
               

               
Cow position:
               
chr23:17404362-17404533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr23:20057561-20057391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr23:15608348-15608179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
110-290
               

               
Cow position:
               
chr23:2472537-2472357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-291
               

               
Cow position:
               
chr23:23885195-23885379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
110-301
               

               
Cow position:
               
chr23:30244243-30244435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
110-301
               

               
Cow position:
               
chr23:33332273-33332082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-302
               

               
Cow position:
               
chr23:40890562-40890760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
110-307
               

               
Cow position:
               
chr23:4741194-4740992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr23:6245382-6245176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-327
               

               
Cow position:
               
chr23:954037-953820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-341
               

               
Cow position:
               
chr23:11079038-11079265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
110-349
               

               
Cow position:
               
chr23:6664496-6664743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
110-381
               

               
Cow position:
               
chr23:10843880-10844147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
110-397
               

               
Cow position:
               
chr23:40371052-40370759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 188
               

               
Conread position:
               
110-399
               

               
Cow position:
               
chr23:20001630-20001917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
110-413
               

               
Cow position:
               
chr23:25565748-25566061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 286
               

               
Conread position:
               
110-413
               

               
Cow position:
               
chr23:38708764-38709067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
217, 49
               

               
Conread position:
               
110-422
               

               
Cow position:
               
chr23:772203-772512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 229
               

               
Conread position:
               
110-422
               

               
Cow position:
               
chr23:27529722-27529429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
110-438
               

               
Cow position:
               
chr23:10913059-10913385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
110-450
               

               
Cow position:
               
chr23:9517910-9517571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 261
               

               
Conread position:
               
110-450
               

               
Cow position:
               
chr23:14642650-14642307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
110-461
               

               
Cow position:
               
chr23:15038591-15038242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
110-473
               

               
Cow position:
               
chr23:7293943-7294320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
110-506
               

               
Cow position:
               
chr23:11782550-11782948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
110-510
               

               
Cow position:
               
chr23:573503-573095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 267
               

               
Conread position:
               
110-510
               

               
Cow position:
               
chr23:4892461-4892856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 240
               

               
Conread position:
               
110-510
               

               
Cow position:
               
chr23:40825546-40825944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 176
               

               
Conread position:
               
110-513
               

               
Cow position:
               
chr23:14215470-14215067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 77
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr23:3286509-3286916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 262
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr23:3904528-3904933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
125, 81
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr23:32657454-32657862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 263
               

               
Conread position:
               
110-532
               

               
Cow position:
               
chr23:20435511-20435084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
55, 187
               

               
Conread position:
               
110-540
               

               
Cow position:
               
chr23:1009847-1009420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
110-548
               

               
Cow position:
               
chr23:1719068-1719498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 57
               

               
Conread position:
               
110-566
               

               
Cow position:
               
chr23:10014098-10014543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 177
               

               
Conread position:
               
110-584
               

               
Cow position:
               
chr23:20456069-20455597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-584
               

               
Cow position:
               
chr23:26932538-26932066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-585
               

               
Cow position:
               
chr23:28084919-28085391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 46
               

               
Conread position:
               
110-585
               

               
Cow position:
               
chr23:30663072-30662602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 135
               

               
Conread position:
               
110-585
               

               
Cow position:
               
chr23:41285491-41285941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 103
               

               
Conread position:
               
110-588
               

               
Cow position:
               
chr23:19056598-19056127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 75
               

               
Conread position:
               
110-589
               

               
Cow position:
               
chr23:1647172-1647644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 50
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr23:1254232-1254714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 50
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr23:1924286-1923810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr23:4608841-4608355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 143
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr23:11128785-11129260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 136
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr23:18797151-18796674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 308
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr23:25865135-25864673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 182
               

               
Conread position:
               
110-591
               

               
Cow position:
               
chr23:9595277-9594805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 189
               

               
Conread position:
               
110-595
               

               
Cow position:
               
chr23:36308969-36309454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 235
               

               
Conread position:
               
111-239
               

               
Cow position:
               
chr23:6173255-6173128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
111-281
               

               
Cow position:
               
chr23:26305930-26306097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
111-325
               

               
Cow position:
               
chr23:27899904-27900124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
111-331
               

               
Cow position:
               
chr23:20919605-20919379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 148
               

               
Conread position:
               
111-375
               

               
Cow position:
               
chr23:497052-496777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
111-381
               

               
Cow position:
               
chr23:33599827-33599558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
111-397
               

               
Cow position:
               
chr23:2802741-2802446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
181, 66
               

               
Conread position:
               
111-449
               

               
Cow position:
               
chr23:39235830-39235482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 144
               

               
Conread position:
               
111-459
               

               
Cow position:
               
chr23:3167796-3168145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 67
               

               
Conread position:
               
111-488
               

               
Cow position:
               
chr23:15569327-15569704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 260
               

               
Conread position:
               
111-494
               

               
Cow position:
               
chr23:615355-614977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
111-495
               

               
Cow position:
               
chr23:39049857-39049489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
369, 69
               

               
Conread position:
               
111-510
               

               
Cow position:
               
chr23:7596776-7596382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 138
               

               
Conread position:
               
111-514
               

               
Cow position:
               
chr23:25562573-25562169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 293
               

               
Conread position:
               
111-532
               

               
Cow position:
               
chr23:2180099-2179677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 277
               

               
Conread position:
               
111-582
               

               
Cow position:
               
chr23:14191104-14191573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 197
               

               
Conread position:
               
111-583
               

               
Cow position:
               
chr23:19002521-19002042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 279
               

               
Conread position:
               
111-589
               

               
Cow position:
               
chr23:32309234-32309709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 268
               

               
Conread position:
               
111-590
               

               
Cow position:
               
chr23:1604780-1605255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 181
               

               
Conread position:
               
111-591
               

               
Cow position:
               
chr23:3209061-3208590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr23:1721449-1720949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 297
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr23:26986727-26986237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr23:29625983-29626450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 128
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr23:31493437-31493898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 157
               

               
Conread position:
               
112-305
               

               
Cow position:
               
chr23:9652967-9652768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
112-327
               

               
Cow position:
               
chr23:20977497-20977712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-409
               

               
Cow position:
               
chr23:39207353-39207056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 180
               

               
Conread position:
               
112-414
               

               
Cow position:
               
chr23:39126317-39126023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
254, 93
               

               
Conread position:
               
112-438
               

               
Cow position:
               
chr23:281313-281641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
112-450
               

               
Cow position:
               
chr23:15702951-15702616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 238
               

               
Conread position:
               
112-589
               

               
Cow position:
               
chr23:1428356-1428837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 109
               

               
Conread position:
               
113-585
               

               
Cow position:
               
chr23:15057072-15056620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
113-590
               

               
Cow position:
               
chr23:1398479-1398012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 209
               

               
Conread position:
               
114-365
               

               
Cow position:
               
chr23:35929561-35929813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
183, 32
               

               
Conread position:
               
114-581
               

               
Cow position:
               
chr23:28183340-28183804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 257
               

               
Conread position:
               
115-533
               

               
Cow position:
               
chr23:9641869-9641446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
15, 176
               

               
Conread position:
               
115-540
               

               
Cow position:
               
chr23:26066653-26067088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 283
               

               
Conread position:
               
116-498
               

               
Cow position:
               
chr23:39573743-39573358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
116-590
               

               
Cow position:
               
chr23:25676110-25675673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
117-316
               

               
Cow position:
               
chr23:25927197-25927007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr23:13427191-13427416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
117-392
               

               
Cow position:
               
chr23:30364444-30364166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 219
               

               
Conread position:
               
117-439
               

               
Cow position:
               
chr23:18108272-18108589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
117-451
               

               
Cow position:
               
chr23:41193956-41194285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
117-505
               

               
Cow position:
               
chr23:38580863-38581246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 62
               

               
Conread position:
               
118-288
               

               
Cow position:
               
chr23:5420948-5420779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
118-302
               

               
Cow position:
               
chr23:26941540-26941726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
118-392
               

               
Cow position:
               
chr23:20704186-20703905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 144
               

               
Conread position:
               
119-327
               

               
Cow position:
               
chr23:15866140-15865926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
119-354
               

               
Cow position:
               
chr23:9073207-9072978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
219, 31
               

               
Conread position:
               
119-467
               

               
Cow position:
               
chr23:28366771-28366421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
119-514
               

               
Cow position:
               
chr23:32052153-32052552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 251
               

               
Conread position:
               
119-579
               

               
Cow position:
               
chr23:1321628-1321192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 61
               

               
Conread position:
               
119-586
               

               
Cow position:
               
chr23:41220689-41220199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 432
               

               
Conread position:
               
120-331
               

               
Cow position:
               
chr23:16087371-16087158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
120-513
               

               
Cow position:
               
chr23:3710475-3710866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 252
               

               
Conread position:
               
120-537
               

               
Cow position:
               
chr23:28032004-28032417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
218, 89
               

               
Conread position:
               
120-537
               

               
Cow position:
               
chr23:28120064-28120480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
218, 231
               

               
Conread position:
               
120-595
               

               
Cow position:
               
chr23:533788-534261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 178
               

               
Conread position:
               
121-585
               

               
Cow position:
               
chr23:17848173-17848633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 12
               

               
Conread position:
               
122-281
               

               
Cow position:
               
chr23:34449803-34449648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
122-387
               

               
Cow position:
               
chr23:39813017-39813279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 82
               

               
Conread position:
               
122-498
               

               
Cow position:
               
chr23:14896230-14895864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
326, 75
               

               
Conread position:
               
123-362
               

               
Cow position:
               
chr23:28628351-28628596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 184
               

               
Conread position:
               
123-382
               

               
Cow position:
               
chr23:39761933-39762191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
123-570
               

               
Cow position:
               
chr23:10415448-10415017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
168, 42
               

               
Conread position:
               
123-595
               

               
Cow position:
               
chr23:20745024-20744559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 275
               

               
Conread position:
               
124-450
               

               
Cow position:
               
chr23:26422002-26422336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 206
               

               
Conread position:
               
126-607
               

               
Cow position:
               
chr23:40777830-40778308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 282
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr23:26349564-26349771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
127-514
               

               
Cow position:
               
chr23:2021885-2021507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
322, 177
               

               
Conread position:
               
129-288
               

               
Cow position:
               
chr23:29741926-29742084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
130-403
               

               
Cow position:
               
chr23:35653675-35653946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
131-263
               

               
Cow position:
               
chr23:26093466-26093331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
131-280
               

               
Cow position:
               
chr23:2167607-2167457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
131-295
               

               
Cow position:
               
chr23:8291243-8291407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-315
               

               
Cow position:
               
chr23:9806537-9806356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
131-326
               

               
Cow position:
               
chr23:4953710-4953903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
131-337
               

               
Cow position:
               
chr23:2721503-2721706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
131-341
               

               
Cow position:
               
chr23:17187777-17187996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
131-376
               

               
Cow position:
               
chr23:7324327-7324570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
131-387
               

               
Cow position:
               
chr23:30338082-30338348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
131-413
               

               
Cow position:
               
chr23:34855089-34854806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
194, 263
               

               
Conread position:
               
131-484
               

               
Cow position:
               
chr23:24504816-24505171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 224
               

               
Conread position:
               
131-513
               

               
Cow position:
               
chr23:1047302-1046924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 241
               

               
Conread position:
               
131-513
               

               
Cow position:
               
chr23:4293222-4293600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
122, 47
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr23:8308750-8308365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 280
               

               
Conread position:
               
131-521
               

               
Cow position:
               
chr23:361344-360955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 182
               

               
Conread position:
               
131-532
               

               
Cow position:
               
chr23:7750760-7751153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 84
               

               
Conread position:
               
131-555
               

               
Cow position:
               
chr23:29471529-29471132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
320, 73
               

               
Conread position:
               
131-585
               

               
Cow position:
               
chr23:4579465-4579017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 278
               

               
Conread position:
               
131-590
               

               
Cow position:
               
chr23:34347908-34348346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
131-595
               

               
Cow position:
               
chr23:1700496-1700928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 39
               

               
Conread position:
               
132-470
               

               
Cow position:
               
chr23:14245076-14245420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
132-514
               

               
Cow position:
               
chr23:15529360-15529740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
132-514
               

               
Cow position:
               
chr23:33074804-33075188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 66
               

               
Conread position:
               
132-532
               

               
Cow position:
               
chr23:26318993-26319389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 95
               

               
Conread position:
               
132-549
               

               
Cow position:
               
chr23:1430226-1429813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 197
               

               
Conread position:
               
132-572
               

               
Cow position:
               
chr23:25669492-25669084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 114
               

               
Conread position:
               
132-590
               

               
Cow position:
               
chr23:39806438-39806899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 39
               

               
Conread position:
               
133-293
               

               
Cow position:
               
chr23:25678153-25678002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr23:34264938-34264725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
194, 100
               

               
Conread position:
               
133-365
               

               
Cow position:
               
chr23:14430916-14430678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
50, 134
               

               
Conread position:
               
133-473
               

               
Cow position:
               
chr23:25336718-25336378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 210
               

               
Conread position:
               
133-584
               

               
Cow position:
               
chr23:20545800-20545351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 238
               

               
Conread position:
               
133-599
               

               
Cow position:
               
chr23:39110669-39111136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 238
               

               
Conread position:
               
134-380
               

               
Cow position:
               
chr23:14970010-14969764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
191, 70
               

               
Conread position:
               
134-514
               

               
Cow position:
               
chr23:39741159-39740783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 171
               

               
Conread position:
               
134-518
               

               
Cow position:
               
chr23:7392708-7392334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
134-584
               

               
Cow position:
               
chr23:41472191-41472642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 114
               

               
Conread position:
               
135-381
               

               
Cow position:
               
chr23:921994-922241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
191, 236
               

               
Conread position:
               
136-590
               

               
Cow position:
               
chr23:18322841-18322396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 134
               

               
Conread position:
               
137-305
               

               
Cow position:
               
chr23:3192571-3192409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
137-390
               

               
Cow position:
               
chr23:25086486-25086230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 181
               

               
Conread position:
               
137-438
               

               
Cow position:
               
chr23:11399680-11399981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
137-514
               

               
Cow position:
               
chr23:16172238-16172617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 268
               

               
Conread position:
               
137-514
               

               
Cow position:
               
chr23:28222645-28223011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
312, 192
               

               
Conread position:
               
137-514
               

               
Cow position:
               
chr23:31638399-31638778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
188, 213
               

               
Conread position:
               
139-284
               

               
Cow position:
               
chr23:8063108-8063253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
139-507
               

               
Cow position:
               
chr23:16383891-16383524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 75
               

               
Conread position:
               
139-514
               

               
Cow position:
               
chr23:1581960-1582335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 232
               

               
Conread position:
               
139-514
               

               
Cow position:
               
chr23:17846897-17847264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
139-544
               

               
Cow position:
               
chr23:7175204-7175599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
139-595
               

               
Cow position:
               
chr23:21336909-21336450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 252
               

               
Conread position:
               
140-450
               

               
Cow position:
               
chr23:23849331-23849650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
140-478
               

               
Cow position:
               
chr23:28118516-28118184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 10
               

               
Conread position:
               
140-501
               

               
Cow position:
               
chr23:39793035-39793389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
141-289
               

               
Cow position:
               
chr23:8918682-8918829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
141-405
               

               
Cow position:
               
chr23:11084090-11083818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
141-585
               

               
Cow position:
               
chr23:11711918-11711476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
185, 230
               

               
Conread position:
               
142-589
               

               
Cow position:
               
chr23:2502279-2501828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 49
               

               
Conread position:
               
143-390
               

               
Cow position:
               
chr23:30588806-30589055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
145-556
               

               
Cow position:
               
chr23:6158618-6158223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 20
               

               
Conread position:
               
145-592
               

               
Cow position:
               
chr23:19759044-19758598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 262
               

               
Conread position:
               
145-708
               

               
Cow position:
               
chr23:292629-293192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
181, 226
               

               
Conread position:
               
148-413
               

               
Cow position:
               
chr23:29467139-29466884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
148-514
               

               
Cow position:
               
chr23:26373755-26374123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
178, 223
               

               
Conread position:
               
149-532
               

               
Cow position:
               
chr23:5870596-5870211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 245
               

               
Conread position:
               
155-318
               

               
Cow position:
               
chr23:19266182-19266016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
155-584
               

               
Cow position:
               
chr23:15271640-15271213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 216
               

               
Conread position:
               
155-595
               

               
Cow position:
               
chr23:4980931-4980512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 63
               

               
Conread position:
               
157-514
               

               
Cow position:
               
chr23:30622594-30622236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
168, 23
               

               
Conread position:
               
158-514
               

               
Cow position:
               
chr23:3321780-3322138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
167, 213
               

               
Conread position:
               
158-590
               

               
Cow position:
               
chr23:34416171-34416588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
161-417
               

               
Cow position:
               
chr23:10518129-10517870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
165, 210
               

               
Conread position:
               
161-465
               

               
Cow position:
               
chr23:25362946-25363253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 245
               

               
Conread position:
               
161-537
               

               
Cow position:
               
chr23:28359042-28358669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
193, 125
               

               
Conread position:
               
161-589
               

               
Cow position:
               
chr23:24866909-24867335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 102
               

               
Conread position:
               
161-595
               

               
Cow position:
               
chr23:3394904-3394466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 213
               

               
Conread position:
               
164-354
               

               
Cow position:
               
chr23:9231929-9231740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
164-588
               

               
Cow position:
               
chr23:22298414-22298009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 215
               

               
Conread position:
               
167-450
               

               
Cow position:
               
chr23:25883289-25883567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
161, 59
               

               
Conread position:
               
167-450
               

               
Cow position:
               
chr23:28987853-28988138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
159, 18
               

               
Conread position:
               
167-544
               

               
Cow position:
               
chr23:23470559-23470919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
167-595
               

               
Cow position:
               
chr23:11380669-11380221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 258
               

               
Conread position:
               
168-570
               

               
Cow position:
               
chr23:32961765-32961356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
168-585
               

               
Cow position:
               
chr23:1337699-1337282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
169-588
               

               
Cow position:
               
chr23:14739064-14739467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 114
               

               
Conread position:
               
169-590
               

               
Cow position:
               
chr23:14839120-14838718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 10
               

               
Conread position:
               
170-514
               

               
Cow position:
               
chr23:17678279-17677939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
171-408
               

               
Cow position:
               
chr23:26322812-26322577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
154, 219
               

               
Conread position:
               
172-413
               

               
Cow position:
               
chr23:28079447-28079690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 230
               

               
Conread position:
               
172-450
               

               
Cow position:
               
chr23:30912689-30912408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
81, 233
               

               
Conread position:
               
172-457
               

               
Cow position:
               
chr23:666493-666216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 118
               

               
Conread position:
               
172-538
               

               
Cow position:
               
chr23:37992611-37992962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
138, 6
               

               
Conread position:
               
172-580
               

               
Cow position:
               
chr23:4996470-4996078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
282, 74
               

               
Conread position:
               
172-584
               

               
Cow position:
               
chr23:22011097-22011507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
154, 199
               

               
Conread position:
               
172-585
               

               
Cow position:
               
chr23:11434653-11434234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 229
               

               
Conread position:
               
172-590
               

               
Cow position:
               
chr23:19636649-19636233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr23:35070099-35070353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
226, 249
               

               
Conread position:
               
175-313
               

               
Cow position:
               
chr23:1065635-1065773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
175-514
               

               
Cow position:
               
chr23:19203012-19202671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
151, 196
               

               
Conread position:
               
178-588
               

               
Cow position:
               
chr23:3208591-3208183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
148, 193
               

               
Conread position:
               
179-331
               

               
Cow position:
               
chr23:11163357-11163205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
179-450
               

               
Cow position:
               
chr23:26003685-26003951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 220
               

               
Conread position:
               
179-520
               

               
Cow position:
               
chr23:2371002-2371332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
179-590
               

               
Cow position:
               
chr23:40526350-40525956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
182-576
               

               
Cow position:
               
chr23:353954-353577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 121
               

               
Conread position:
               
183-303
               

               
Cow position:
               
chr23:2269688-2269567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
183-362
               

               
Cow position:
               
chr23:36014707-36014887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
183-433
               

               
Cow position:
               
chr23:9294128-9293880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
142, 55
               

               
Conread position:
               
183-584
               

               
Cow position:
               
chr23:479154-479551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
142, 6
               

               
Conread position:
               
184-305
               

               
Cow position:
               
chr23:9655913-9656034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-510
               

               
Cow position:
               
chr23:11376504-11376179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
214, 247
               

               
Conread position:
               
185-521
               

               
Cow position:
               
chr23:17796690-17796348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 183
               

               
Conread position:
               
185-543
               

               
Cow position:
               
chr23:25408464-25408815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
185-590
               

               
Cow position:
               
chr23:16058228-16058621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
186-365
               

               
Cow position:
               
chr23:15844733-15844547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
186-413
               

               
Cow position:
               
chr23:29811278-29811507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
186-438
               

               
Cow position:
               
chr23:40081093-40081345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
186-585
               

               
Cow position:
               
chr23:33601892-33601504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 129
               

               
Conread position:
               
189-590
               

               
Cow position:
               
chr23:14164772-14164371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
189-590
               

               
Cow position:
               
chr23:28206245-28206624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
189-590
               

               
Cow position:
               
chr23:38455553-38455152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 21
               

               
Conread position:
               
190-589
               

               
Cow position:
               
chr23:24509335-24509720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 156
               

               
Conread position:
               
192-590
               

               
Cow position:
               
chr23:5389338-5389728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
192-590
               

               
Cow position:
               
chr23:27996772-27997155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
135, 99
               

               
Conread position:
               
193-422
               

               
Cow position:
               
chr23:31827350-31827580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
132, 178
               

               
Conread position:
               
194-449
               

               
Cow position:
               
chr23:11404625-11404371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
194-514
               

               
Cow position:
               
chr23:7429086-7429408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 211
               

               
Conread position:
               
194-590
               

               
Cow position:
               
chr23:16700383-16700015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
195-413
               

               
Cow position:
               
chr23:18487387-18487608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
196-520
               

               
Cow position:
               
chr23:15003643-15003947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
196-596
               

               
Cow position:
               
chr23:33658201-33657801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 175
               

               
Conread position:
               
197-589
               

               
Cow position:
               
chr23:28052916-28053295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 175
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr23:19910311-19910102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
198-590
               

               
Cow position:
               
chr23:7402346-7402728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 192
               

               
Conread position:
               
199-514
               

               
Cow position:
               
chr23:11965469-11965152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
129, 172
               

               
Conread position:
               
199-590
               

               
Cow position:
               
chr23:9734061-9734437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 10
               

               
Conread position:
               
199-590
               

               
Cow position:
               
chr23:40780969-40781357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 119
               

               
Conread position:
               
201-392
               

               
Cow position:
               
chr23:13945400-13945592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
201-470
               

               
Cow position:
               
chr23:9235422-9235164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 200
               
UCSC Genome Browser

               
Conread position:
               
201-514
               

               
Cow position:
               
chr23:15180796-15181103 (view  custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
141, 113
               
UCSC Genome Browser

               
               
               
Conread position:
204-454

               
               
               
Cow position:
chr23:208489-208725 (view  custom track)

               
               
               
Alignm length:
251

               
               
               
Alignm identity:
182

               
               
               
Alignm E-value:
4e-34

               
               
               
Alignm gaps (pig, cow):
99, 0
UCSC Genome Browser

               
               
               
Conread position:
204-531

               
               
               
Cow position:
chr23:8327308-8327639 (view  custom track)

               
               
               
Alignm length:
335

               
               
               
Alignm identity:
220

               
               
               
Alignm E-value:
1e-32

               
               
               
Alignm gaps (pig, cow):
121, 200

               
               
               Conread position:205-409
               
               
               Cow position:chr23:12570793-12570588 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:147
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):121, 0

               
               
               Conread position:205-422
               
               
               Cow position:chr23:1240707-1240919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:168
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):122, 163

               
               
               Conread position:205-514
               
               
               Cow position:chr23:805971-806282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:207
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):120, 166

               
               
               Conread position:205-579
               
               
               Cow position:chr23:5738081-5737705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:242
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):103, 36

               
               
               Conread position:206-426
               
               
               Cow position:chr23:30752193-30751974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:151
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):119, 202

               
               
               Conread position:209-342
               
               
               Cow position:chr23:34356309-34356442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:102
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:209-590
               
               
               Cow position:chr23:4529241-4528850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:210-413
               
               
               Cow position:chr23:21667100-21667304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):189, 113

               
               
               Conread position:213-327
               
               
               Cow position:chr23:18091192-18091306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:93
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:213-460
               
               
               Cow position:chr23:35369355-35369114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:150
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):191, 0

               
               
               Conread position:213-590
               
               
               Cow position:chr23:5162082-5162460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):78, 70

               
               
               Conread position:214-413
               
               
               Cow position:chr23:9133010-9132808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:157
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:214-520
               
               
               Cow position:chr23:29824408-29824113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):99, 109

               
               
               Conread position:214-572
               
               
               Cow position:chr23:32555519-32555164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:236
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):111, 177

               
               
               Conread position:215-514
               
               
               Cow position:chr23:30334472-30334174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:204
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):110, 71

               
               
               Conread position:217-514
               
               
               Cow position:chr23:4531919-4531616 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:201
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):94, 158

               
               
               Conread position:217-520
               
               
               Cow position:chr23:12896948-12896649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:230
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):68, 192

               
               
               Conread position:218-514
               
               
               Cow position:chr23:26932810-26933108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):108, 215

               
               
               Conread position:218-590
               
               
               Cow position:chr23:37065501-37065876 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 29

               
               
               Conread position:219-514
               
               
               Cow position:chr23:27378137-27378434 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:203
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):107, 152

               
               
               Conread position:219-569
               
               
               Cow position:chr23:29175650-29175982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:237
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):106, 73

               
               
               Conread position:219-595
               
               
               Cow position:chr23:39778077-39778435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):119, 73

               
               
               Conread position:220-413
               
               
               Cow position:chr23:22574396-22574206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:147
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):105, 94

               
               
               Conread position:220-514
               
               
               Cow position:chr23:769324-769019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:208
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):165, 101

               
               
               Conread position:220-590
               
               
               Cow position:chr23:2799232-2799607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:267
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):179, 23

               
               
               Conread position:221-635
               
               
               Cow position:chr23:39752777-39753186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:417
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):104, 184

               
               
               Conread position:226-590
               
               
               Cow position:chr23:6995298-6994956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:260
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):268, 57

               
               
               Conread position:227-478
               
               
               Cow position:chr23:1664360-1664606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:190
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):100, 52

               
               
               Conread position:229-595
               
               
               Cow position:chr23:4968858-4968490 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:266
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):66, 18

               
               
               Conread position:230-588
               
               
               Cow position:chr23:12660977-12661324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:364
               
               
               Alignm identity:241
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):134, 98

               
               
               Conread position:233-412
               
               
               Cow position:chr23:2408103-2407924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:131
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):6, 119

               
               
               Conread position:234-501
               
               
               Cow position:chr23:38414299-38414022 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:202
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):49, 136

               
               
               Conread position:234-514
               
               
               Cow position:chr23:19948080-19947798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:190
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):92, 137

               
               
               Conread position:235-594
               
               
               Cow position:chr23:1905705-1906081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):90, 149

               
               
               Conread position:236-381
               
               
               Cow position:chr23:1922389-1922244 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):91, 56

               
               
               Conread position:237-585
               
               
               Cow position:chr23:4472433-4472081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:233
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):174, 91

               
               
               Conread position:238-450
               
               
               Cow position:chr23:4819065-4819275 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:143
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):87, 59

               
               
               Conread position:238-513
               
               
               Cow position:chr23:21624016-21623739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):17, 133

               
               
               Conread position:241-410
               
               
               Cow position:chr23:7360620-7360791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:128
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):83, 42

               
               
               Conread position:241-450
               
               
               Cow position:chr23:39780295-39780496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):85, 150

               
               
               Conread position:241-528
               
               
               Cow position:chr23:10085497-10085216 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:203
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):89, 44

               
               
               Conread position:241-569
               
               
               Cow position:chr23:39309431-39309104 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:238
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):89, 48

               
               
               Conread position:241-584
               
               
               Cow position:chr23:25192861-25193200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:225
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):85, 130

               
               
               Conread position:244-535
               
               
               Cow position:chr23:26435769-26435486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):278, 61

               
               
               Conread position:246-472
               
               
               Cow position:chr23:1610530-1610764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):46, 119

               
               
               Conread position:247-382
               
               
               Cow position:chr23:36172235-36172373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:113
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:247-534
               
               
               Cow position:chr23:587085-587373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):83, 36

               
               
               Conread position:247-590
               
               
               Cow position:chr23:20752702-20753043 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:240
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):227, 157

               
               
               Conread position:247-596
               
               
               Cow position:chr23:28059542-28059891 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):79, 124

               
               
               Conread position:248-595
               
               
               Cow position:chr23:16563533-16563868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):79, 19

               
               
               Conread position:249-460
               
               
               Cow position:chr23:35366405-35366202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:251-514
               
               
               Cow position:chr23:6568989-6569254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):75, 120

               
               
               Conread position:251-532
               
               
               Cow position:chr23:12090444-12090164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:187
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):198, 153

               
               
               Conread position:252-461
               
               
               Cow position:chr23:1545909-1546113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):21, 129

               
               
               Conread position:252-470
               
               
               Cow position:chr23:7937842-7937637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:252-514
               
               
               Cow position:chr23:3449952-3449688 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):74, 119

               
               
               Conread position:252-585
               
               
               Cow position:chr23:3247285-3247608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:238
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):78, 31

               
               
               Conread position:252-590
               
               
               Cow position:chr23:17891201-17890866 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:217
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):70, 146

               
               
               Conread position:254-595
               
               
               Cow position:chr23:29459398-29459065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:256
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 156

               
               
               Conread position:255-531
               
               
               Cow position:chr23:36198990-36199261 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):30, 37

               
               
               Conread position:256-591
               
               
               Cow position:chr23:25358429-25358757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:224
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):29, 36

               
               
               Conread position:257-589
               
               
               Cow position:chr23:1883092-1883420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):72, 142

               
               
               Conread position:258-584
               
               
               Cow position:chr23:19316184-19315860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:210
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):68, 113

               
               
               Conread position:259-514
               
               
               Cow position:chr23:13600518-13600261 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:170
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):67, 112

               
               
               Conread position:260-584
               
               
               Cow position:chr23:27862030-27862350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:223
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):33, 81

               
               
               Conread position:266-590
               
               
               Cow position:chr23:31601750-31601424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:225
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):64, 139

               
               
               Conread position:267-503
               
               
               Cow position:chr23:5143891-5143653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:161
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):65, 132

               
               
               Conread position:267-534
               
               
               Cow position:chr23:1690497-1690761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):63, 141

               
               
               Conread position:267-590
               
               
               Cow position:chr23:20171288-20171606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:216
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):217, 32

               
               
               Conread position:272-465
               
               
               Cow position:chr23:35363057-35362871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):55, 31

               
               
               Conread position:273-473
               
               
               Cow position:chr23:4972501-4972695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:148
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):97, 47

               
               
               Conread position:277-590
               
               
               Cow position:chr23:3262781-3262470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:216
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):10, 103

               
               
               Conread position:277-590
               
               
               Cow position:chr23:13555710-13555411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):15, 114

               
               
               Conread position:278-516
               
               
               Cow position:chr23:34883165-34882923 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:162
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):47, 157

               
               
               Conread position:279-548
               
               
               Cow position:chr23:1605400-1605667 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):46, 123

               
               
               Conread position:279-595
               
               
               Cow position:chr23:3918377-3918063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:223
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):46, 120

               
               
               Conread position:282-473
               
               
               Cow position:chr23:8918129-8917941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:141
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):48, 123

               
               
               Conread position:282-535
               
               
               Cow position:chr23:20195193-20194942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):5, 25

               
               
               Conread position:284-589
               
               
               Cow position:chr23:26948915-26949222 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:211
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):8, 252

               
               
               Conread position:285-514
               
               
               Cow position:chr23:10824797-10825027 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):40, 120

               
               
               Conread position:285-590
               
               
               Cow position:chr23:186898-187205 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:217
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):45, 123

               
               
               Conread position:291-585
               
               
               Cow position:chr23:15287401-15287116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:213
               
               
               Alignm E-value:8.99634e-43
               
               
               Alignm gaps (pig, cow):37, 114

               
               
               Conread position:291-588
               
               
               Cow position:chr23:11045217-11045512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):39, 95

               
               
               Conread position:291-589
               
               
               Cow position:chr23:8063286-8063570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:208
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):39, 68

               
               
               Conread position:291-590
               
               
               Cow position:chr23:1803528-1803813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:211
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):156, 7

               
               
               Conread position:291-590
               
               
               Cow position:chr23:16237527-16237224 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:206
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):38, 125

               
               
               Conread position:291-590
               
               
               Cow position:chr23:29242677-29242976 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:216
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):22, 117

               
               
               Conread position:291-590
               
               
               Cow position:chr23:29346026-29345737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:200
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):113, 0

               
               
               Conread position:292-514
               
               
               Cow position:chr23:4005430-4005205 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):34, 78

               
               
               Conread position:293-481
               
               
               Cow position:chr23:29742121-29742302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:138
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):29, 11

               
               
               Conread position:293-538
               
               
               Cow position:chr23:26795169-26794933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):44, 112

               
               
               Conread position:293-543
               
               
               Cow position:chr23:2436592-2436343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:171
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):19, 67

               
               
               Conread position:293-589
               
               
               Cow position:chr23:17404587-17404865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):199, 37

               
               
               Conread position:293-589
               
               
               Cow position:chr23:29034047-29034344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 116

               
               
               Conread position:293-590
               
               
               Cow position:chr23:40891094-40891389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:201
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):19, 115

               
               
               Conread position:293-591
               
               
               Cow position:chr23:3967812-3967537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):63, 45

               
               
               Conread position:293-595
               
               
               Cow position:chr23:16881422-16881129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:221
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):33, 78

               
               
               Conread position:295-520
               
               
               Cow position:chr23:22588533-22588305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:160
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):35, 113

               
               
               Conread position:299-522
               
               
               Cow position:chr23:5617320-5617539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):149, 30

               
               
               Conread position:300-543
               
               
               Cow position:chr23:1991685-1991446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):30, 95

               
               
               Conread position:300-566
               
               
               Cow position:chr23:6172920-6172665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):30, 94

               
               
               Conread position:300-590
               
               
               Cow position:chr23:20057125-20056837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 105

               
               
               Conread position:302-531
               
               
               Cow position:chr23:4523234-4523008 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):8, 43

               
               
               Conread position:303-563
               
               
               Cow position:chr23:2259852-2259592 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):175, 26

               
               
               Conread position:303-590
               
               
               Cow position:chr23:37224321-37224039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):42, 113

               
               
               Conread position:306-413
               
               
               Cow position:chr23:5744845-5744955 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:111
               
               
               Alignm identity:90
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:306-503
               
               
               Cow position:chr23:4740731-4740526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:306-516
               
               
               Cow position:chr23:4810498-4810709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:159
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):24, 93

               
               
               Conread position:306-517
               
               
               Cow position:chr23:5395677-5395473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):24, 100

               
               
               Conread position:306-524
               
               
               Cow position:chr23:3715513-3715733 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):22, 47

               
               
               Conread position:306-569
               
               
               Cow position:chr23:19538246-19537988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:174
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):32, 99

               
               
               Conread position:306-579
               
               
               Cow position:chr23:2282426-2282163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:202
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):24, 51

               
               
               Conread position:306-585
               
               
               Cow position:chr23:21452985-21452708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:215
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):24, 105

               
               
               Conread position:306-588
               
               
               Cow position:chr23:16583161-16582885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):24, 98

               
               
               Conread position:306-588
               
               
               Cow position:chr23:19979200-19978929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:206
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):23, 100

               
               
               Conread position:306-589
               
               
               Cow position:chr23:26632548-26632830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:207
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):186, 98

               
               
               Conread position:306-590
               
               
               Cow position:chr23:7221266-7220986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:194
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):32, 118

               
               
               Conread position:307-522
               
               
               Cow position:chr23:1878122-1877912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):30, 95

               
               
               Conread position:307-569
               
               
               Cow position:chr23:33696026-33695766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):23, 98

               
               
               Conread position:308-520
               
               
               Cow position:chr23:12408761-12408550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):22, 69

               
               
               Conread position:308-589
               
               
               Cow position:chr23:11315267-11315009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:203
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):18, 82

               
               
               Conread position:308-590
               
               
               Cow position:chr23:4562638-4562912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:201
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):143, 16

               
               
               Conread position:308-595
               
               
               Cow position:chr23:9599252-9599528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:208
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):22, 84

               
               
               Conread position:309-589
               
               
               Cow position:chr23:6244836-6244570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):21, 96

               
               
               Conread position:309-595
               
               
               Cow position:chr23:38208462-38208760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:207
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):90, 233

               
               
               Conread position:310-496
               
               
               Cow position:chr23:41348896-41348711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):141, 94

               
               
               Conread position:310-519
               
               
               Cow position:chr23:36726162-36725954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):81, 20

               
               
               Conread position:310-590
               
               
               Cow position:chr23:2055454-2055731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):28, 114

               
               
               Conread position:310-590
               
               
               Cow position:chr23:18402534-18402263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):28, 105

               
               
               Conread position:311-590
               
               
               Cow position:chr23:26849148-26848873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):19, 53

               
               
               Conread position:312-504
               
               
               Cow position:chr23:6767646-6767832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:313-571
               
               
               Cow position:chr23:18296566-18296816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):135, 15

               
               
               Conread position:313-590
               
               
               Cow position:chr23:670375-670646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:192
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):26, 93

               
               
               Conread position:315-595
               
               
               Cow position:chr23:5706756-5707027 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:205
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):17, 76

               
               
               Conread position:316-590
               
               
               Cow position:chr23:2417213-2417477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:182
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):13, 82

               
               
               Conread position:316-635
               
               
               Cow position:chr23:1885418-1885101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:222
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):14, 90

               
               
               Conread position:320-595
               
               
               Cow position:chr23:6367368-6367644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:209
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):115, 84

               
               
               Conread position:321-583
               
               
               Cow position:chr23:22674677-22674416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):25, 105

               
               
               Conread position:323-590
               
               
               Cow position:chr23:10416659-10416394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):7, 68

               
               
               Conread position:325-535
               
               
               Cow position:chr23:35254470-35254264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):57, 65

               
               
               Conread position:325-581
               
               
               Cow position:chr23:33717775-33717523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):167, 8

               
               
               Conread position:325-583
               
               
               Cow position:chr23:36076053-36075797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):38, 23

               
               
               Conread position:325-589
               
               
               Cow position:chr23:25378423-25378675 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):123, 39

               
               
               Conread position:325-590
               
               
               Cow position:chr23:5603503-5603258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:325-590
               
               
               Cow position:chr23:15742867-15743118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):167, 57

               
               
               Conread position:326-590
               
               
               Cow position:chr23:24704048-24704311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):122, 63

               
               
               Conread position:331-590
               
               
               Cow position:chr23:40648953-40648705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:335-589
               
               
               Cow position:chr23:27544610-27544853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:183
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):157, 68

               
               
               Conread position:338-615
               
               
               Cow position:chr23:4504608-4504883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):28, 32

               
               
               Conread position:339-587
               
               
               Cow position:chr23:1068531-1068292 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:179
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):97, 62

               
               
               Conread position:341-569
               
               
               Cow position:chr23:14417902-14417675 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):108, 63

               
               
               Conread position:343-543
               
               
               Cow position:chr23:2457248-2457444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:142
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:343-590
               
               
               Cow position:chr23:5723329-5723572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:177
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):95, 55

               
               
               Conread position:343-595
               
               
               Cow position:chr23:18902265-18902018 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):149, 62

               
               
               Conread position:345-588
               
               
               Cow position:chr23:21764705-21764945 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):146, 60

               
               
               Conread position:346-590
               
               
               Cow position:chr23:22399190-22399436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):147, 59

               
               
               Conread position:348-585
               
               
               Cow position:chr23:1776840-1776612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:352-579
               
               
               Cow position:chr23:24930278-24930056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):96, 53

               
               
               Conread position:352-595
               
               
               Cow position:chr23:4646308-4646544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):195, 53

               
               
               Conread position:357-548
               
               
               Cow position:chr23:30585862-30585674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):135, 48

               
               
               Conread position:357-618
               
               
               Cow position:chr23:20248900-20248637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):92, 47

               
               
               Conread position:359-535
               
               
               Cow position:chr23:30999377-30999553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):133, 46

               
               
               Conread position:359-560
               
               
               Cow position:chr23:5451123-5451322 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):135, 46

               
               
               Conread position:360-590
               
               
               Cow position:chr23:38973649-38973877 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:168
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):95, 29

               
               
               Conread position:361-595
               
               
               Cow position:chr23:5426231-5426467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:176
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):134, 44

               
               
               Conread position:363-595
               
               
               Cow position:chr23:19371265-19371041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:164
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):29, 39

               
               
               Conread position:368-549
               
               
               Cow position:chr23:1585578-1585401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:369-595
               
               
               Cow position:chr23:2488173-2487958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):125, 36

               
               
               Conread position:382-584
               
               
               Cow position:chr23:3434087-3433890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:147
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):110, 12

               
               
               Conread position:388-590
               
               
               Cow position:chr23:12334033-12334237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:140
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):18, 49

               
               
               Conread position:394-589
               
               
               Cow position:chr23:3282282-3282096 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):146, 13

               
               
               Conread position:400-590
               
               
               Cow position:chr23:1921390-1921200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):54, 141

               
               
               Conread position:401-590
               
               
               Cow position:chr23:4329839-4329648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):47, 14

               
               
               Conread position:413-589
               
               
               Cow position:chr23:21502787-21502611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:134
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):117, 133

               
               
               Conread position:420-590
               
               
               Cow position:chr23:35938199-35938372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):59, 122

               
               
               Conread position:428-595
               
               
               Cow position:chr23:12363753-12363584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):62, 103

               
               
               Conread position:429-574
               
               
               Cow position:chr23:24809799-24809652 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:112
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):63, 121

               
               
               Conread position:432-588
               
               
               Cow position:chr23:5732419-5732576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:125
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):60, 93

               
               
               Conread position:436-583
               
               
               Cow position:chr23:16076286-16076147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):63, 34

               
               
               Conread position:436-595
               
               
               Cow position:chr23:2801811-2801649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):54, 44

               
               
               Conread position:437-594
               
               
               Cow position:chr23:5795352-5795510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):55, 106
Show alignments to all cow chromosomes.