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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8018I16.3
        

               
Conread position:
               
76-514
               

               
Cow position:
               
chr24:16475288-16475726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 96
               

               
Conread position:
               
78-303
               

               
Cow position:
               
chr24:23695426-23695206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
96-438
               

               
Cow position:
               
chr24:38884931-38884597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
97-514
               

               
Cow position:
               
chr24:35872413-35872006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
99-443
               

               
Cow position:
               
chr24:28336025-28335683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
99-522
               

               
Cow position:
               
chr24:15919224-15919643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
193, 17
               

               
Conread position:
               
101-314
               

               
Cow position:
               
chr24:34603010-34603226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 162
               

               
Conread position:
               
102-316
               

               
Cow position:
               
chr24:17491424-17491636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
102-378
               

               
Cow position:
               
chr24:16646080-16645811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
102-382
               

               
Cow position:
               
chr24:31770329-31770619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
102-413
               

               
Cow position:
               
chr24:16056019-16055699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
102-422
               

               
Cow position:
               
chr24:13236117-13236438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 166
               

               
Conread position:
               
102-450
               

               
Cow position:
               
chr24:16962802-16962442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
102-512
               

               
Cow position:
               
chr24:12348582-12348989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
232, 213
               

               
Conread position:
               
102-514
               

               
Cow position:
               
chr24:13819458-13819870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 223
               

               
Conread position:
               
102-516
               

               
Cow position:
               
chr24:11006731-11007149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 206
               

               
Conread position:
               
104-605
               

               
Cow position:
               
chr24:6154352-6154829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
98, 131
               

               
Conread position:
               
106-255
               

               
Cow position:
               
chr24:17752398-17752253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
106-596
               

               
Cow position:
               
chr24:13178893-13178403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 327
               

               
Conread position:
               
107-239
               

               
Cow position:
               
chr24:27266865-27266997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-410
               

               
Cow position:
               
chr24:12198499-12198195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
107-464
               

               
Cow position:
               
chr24:11064393-11064729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 97
               

               
Conread position:
               
107-511
               

               
Cow position:
               
chr24:31302541-31302939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
107-514
               

               
Cow position:
               
chr24:3794343-3794736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 64
               

               
Conread position:
               
107-533
               

               
Cow position:
               
chr24:5607606-5607194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
108-257
               

               
Cow position:
               
chr24:5279440-5279290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
108-296
               

               
Cow position:
               
chr24:28601207-28601019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
108-297
               

               
Cow position:
               
chr24:7744115-7744303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
108-327
               

               
Cow position:
               
chr24:40771643-40771861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
184, 101
               

               
Conread position:
               
108-447
               

               
Cow position:
               
chr24:12191481-12191824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
108-450
               

               
Cow position:
               
chr24:14914019-14913678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 136
               

               
Conread position:
               
108-470
               

               
Cow position:
               
chr24:12146734-12146377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
217, 85
               

               
Conread position:
               
108-488
               

               
Cow position:
               
chr24:8814485-8814096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 85
               

               
Conread position:
               
108-510
               

               
Cow position:
               
chr24:40280873-40280471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
224, 216
               

               
Conread position:
               
108-514
               

               
Cow position:
               
chr24:12293548-12293956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 263
               

               
Conread position:
               
108-514
               

               
Cow position:
               
chr24:40466559-40466152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 297
               

               
Conread position:
               
108-548
               

               
Cow position:
               
chr24:36174250-36173820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
108-584
               

               
Cow position:
               
chr24:38897022-38896548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 263
               

               
Conread position:
               
108-585
               

               
Cow position:
               
chr24:34271044-34271519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 263
               

               
Conread position:
               
108-590
               

               
Cow position:
               
chr24:11839704-11840187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 195
               

               
Conread position:
               
108-595
               

               
Cow position:
               
chr24:5141456-5141949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 305
               

               
Conread position:
               
109-244
               

               
Cow position:
               
chr24:19406633-19406498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-263
               

               
Cow position:
               
chr24:8003176-8003330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr24:43200792-43200620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
109-284
               

               
Cow position:
               
chr24:27632914-27633089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr24:19782635-19782821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr24:25424534-25424709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
109-289
               

               
Cow position:
               
chr24:17294859-17294677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
109-289
               

               
Cow position:
               
chr24:40974520-40974694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
109-289
               

               
Cow position:
               
chr24:45004454-45004633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
109-293
               

               
Cow position:
               
chr24:36800912-36801091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
109-293
               

               
Cow position:
               
chr24:40206368-40206552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
170, 87
               

               
Conread position:
               
109-295
               

               
Cow position:
               
chr24:144495-144309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-295
               

               
Cow position:
               
chr24:34761363-34761549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-303
               

               
Cow position:
               
chr24:40184098-40184298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
109-304
               

               
Cow position:
               
chr24:44877356-44877550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
109-311
               

               
Cow position:
               
chr24:3512793-3512597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr24:17566701-17566902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr24:18234630-18234834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr24:18399590-18399389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
109-314
               

               
Cow position:
               
chr24:33052773-33052569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr24:35815628-35815420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr24:13890787-13890569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr24:18740513-18740295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr24:26795272-26795490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr24:40789739-40789521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr24:14760754-14760977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
109-336
               

               
Cow position:
               
chr24:16996434-16996667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
109-336
               

               
Cow position:
               
chr24:24455249-24455478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
109-337
               

               
Cow position:
               
chr24:16897320-16897087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
109-354
               

               
Cow position:
               
chr24:13373652-13373409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
109-362
               

               
Cow position:
               
chr24:16541319-16541065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 0
               

               
Conread position:
               
109-362
               

               
Cow position:
               
chr24:38444384-38444639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
109-371
               

               
Cow position:
               
chr24:23486517-23486775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
219, 88
               

               
Conread position:
               
109-371
               

               
Cow position:
               
chr24:29360452-29360193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
109-379
               

               
Cow position:
               
chr24:15372644-15372917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 169
               

               
Conread position:
               
109-381
               

               
Cow position:
               
chr24:4649422-4649149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-392
               

               
Cow position:
               
chr24:13117488-13117772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
109-397
               

               
Cow position:
               
chr24:16844810-16844518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
109-397
               

               
Cow position:
               
chr24:17030054-17029767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
221, 95
               

               
Conread position:
               
109-400
               

               
Cow position:
               
chr24:17309573-17309281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
216, 16
               

               
Conread position:
               
109-400
               

               
Cow position:
               
chr24:18839788-18839503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
113, 158
               

               
Conread position:
               
109-400
               

               
Cow position:
               
chr24:27153797-27153505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-403
               

               
Cow position:
               
chr24:4616221-4615926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
109-405
               

               
Cow position:
               
chr24:26412902-26413201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-407
               

               
Cow position:
               
chr24:38655571-38655267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr24:13319599-13319299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 238
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr24:17720569-17720264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 266
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr24:35503131-35502828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
109-412
               

               
Cow position:
               
chr24:17544107-17543803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 269
               

               
Conread position:
               
109-413
               

               
Cow position:
               
chr24:5652440-5652149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
257, 131
               

               
Conread position:
               
109-413
               

               
Cow position:
               
chr24:37037139-37037442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 225
               

               
Conread position:
               
109-415
               

               
Cow position:
               
chr24:39913940-39914243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
229, 137
               

               
Conread position:
               
109-416
               

               
Cow position:
               
chr24:27754217-27754524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 236
               

               
Conread position:
               
109-417
               

               
Cow position:
               
chr24:24818740-24818433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
234, 75
               

               
Conread position:
               
109-420
               

               
Cow position:
               
chr24:12503919-12504232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 68
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr24:8021091-8021414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
52, 214
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr24:16654149-16653834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr24:22047218-22046904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-437
               

               
Cow position:
               
chr24:33938710-33939036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
109-444
               

               
Cow position:
               
chr24:43693228-43692888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
173, 116
               

               
Conread position:
               
109-447
               

               
Cow position:
               
chr24:3515672-3515342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
217, 145
               

               
Conread position:
               
109-449
               

               
Cow position:
               
chr24:41670747-41670409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr24:20283356-20283017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
228, 80
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr24:28067285-28067621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 224
               

               
Conread position:
               
109-450
               

               
Cow position:
               
chr24:44989101-44988755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
58, 172
               

               
Conread position:
               
109-451
               

               
Cow position:
               
chr24:41411288-41411636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
109-458
               

               
Cow position:
               
chr24:30262847-30263197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
109-462
               

               
Cow position:
               
chr24:27503060-27502717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
215, 0
               

               
Conread position:
               
109-465
               

               
Cow position:
               
chr24:32455953-32456308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 162
               

               
Conread position:
               
109-469
               

               
Cow position:
               
chr24:24002503-24002863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
109-469
               

               
Cow position:
               
chr24:39729894-39729533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
109-470
               

               
Cow position:
               
chr24:29375864-29376213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
340, 108
               

               
Conread position:
               
109-477
               

               
Cow position:
               
chr24:15084435-15084803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-488
               

               
Cow position:
               
chr24:11311669-11311288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 264
               

               
Conread position:
               
109-489
               

               
Cow position:
               
chr24:22193251-22193631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 102
               

               
Conread position:
               
109-489
               

               
Cow position:
               
chr24:45216590-45216213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 300
               

               
Conread position:
               
109-490
               

               
Cow position:
               
chr24:15666883-15666502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 17
               

               
Conread position:
               
109-500
               

               
Cow position:
               
chr24:14146019-14145644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
216, 28
               

               
Conread position:
               
109-507
               

               
Cow position:
               
chr24:26846759-26846352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
109-507
               

               
Cow position:
               
chr24:39238323-39238716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 309
               

               
Conread position:
               
109-510
               

               
Cow position:
               
chr24:6035324-6034929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
319, 95
               

               
Conread position:
               
109-512
               

               
Cow position:
               
chr24:38593171-38593576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 214
               

               
Conread position:
               
109-512
               

               
Cow position:
               
chr24:39217100-39216696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 323
               

               
Conread position:
               
109-513
               

               
Cow position:
               
chr24:6436318-6436721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 28
               

               
Conread position:
               
109-513
               

               
Cow position:
               
chr24:25269473-25269058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
109-513
               

               
Cow position:
               
chr24:39900793-39900394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 31
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:192942-193346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:5990332-5989924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 324
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:6019115-6018708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:6020223-6019818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 52
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:6443292-6443695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
216, 51
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:8776831-8777237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 210
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:9616434-9616041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
217, 117
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:11080927-11080534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 53
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:11104296-11103885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:11152205-11152610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:12447347-12447740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 53
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:13173631-13173222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:13185838-13185434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 78
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:13304645-13304243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
215, 238
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:14124615-14125023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 263
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:14249727-14249320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:15296971-15297377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 263
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:16558158-16557751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:17161122-17160715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:17188416-17188009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:17455903-17456310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:19679397-19679798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 296
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:19837024-19837428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 85
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:19886083-19886487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 85
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:20221045-20221448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:20604604-20605012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 263
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:22795411-22795814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 185
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:27760377-27760784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:28833006-28832599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:29083803-29083395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
196, 245
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:29191139-29191536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 227
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:30768243-30768643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:30870118-30869721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 177
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:31067199-31066796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:32854064-32854472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 50
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:35793704-35794113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:35823072-35822665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 296
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:36027659-36027251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 196
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:36268525-36268931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 271
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:36780272-36780671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 213
               

               
Conread position:
               
109-514
               

               
Cow position:
               
chr24:39067007-39066600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-515
               

               
Cow position:
               
chr24:19475644-19476033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 137
               

               
Conread position:
               
109-516
               

               
Cow position:
               
chr24:28723953-28724363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 144
               

               
Conread position:
               
109-516
               

               
Cow position:
               
chr24:33239027-33238613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 300
               

               
Conread position:
               
109-518
               

               
Cow position:
               
chr24:32405528-32405116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
74, 331
               

               
Conread position:
               
109-520
               

               
Cow position:
               
chr24:25229558-25229124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
53, 318
               

               
Conread position:
               
109-525
               

               
Cow position:
               
chr24:16909154-16909579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
109-525
               

               
Cow position:
               
chr24:32361002-32360583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
109-530
               

               
Cow position:
               
chr24:11118812-11119228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 163
               

               
Conread position:
               
109-532
               

               
Cow position:
               
chr24:18075658-18076092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 199
               

               
Conread position:
               
109-532
               

               
Cow position:
               
chr24:32158749-32158330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 43
               

               
Conread position:
               
109-533
               

               
Cow position:
               
chr24:21264977-21264562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
109-533
               

               
Cow position:
               
chr24:25677552-25677984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 148
               

               
Conread position:
               
109-533
               

               
Cow position:
               
chr24:27809704-27810133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 139
               

               
Conread position:
               
109-535
               

               
Cow position:
               
chr24:27720222-27719807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 71
               

               
Conread position:
               
109-539
               

               
Cow position:
               
chr24:35572012-35572437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
109-540
               

               
Cow position:
               
chr24:33985489-33985058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 102
               

               
Conread position:
               
109-541
               

               
Cow position:
               
chr24:18113312-18113746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 332
               

               
Conread position:
               
109-549
               

               
Cow position:
               
chr24:29073152-29072701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 268
               

               
Conread position:
               
109-550
               

               
Cow position:
               
chr24:39441032-39440590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
109-572
               

               
Cow position:
               
chr24:11876407-11876870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
109-579
               

               
Cow position:
               
chr24:32759264-32758767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
109-579
               

               
Cow position:
               
chr24:37386839-37386356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
67, 289
               

               
Conread position:
               
109-579
               

               
Cow position:
               
chr24:40035239-40034779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 234
               

               
Conread position:
               
109-580
               

               
Cow position:
               
chr24:11940889-11941357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 285
               

               
Conread position:
               
109-580
               

               
Cow position:
               
chr24:14530889-14531351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
340, 102
               

               
Conread position:
               
109-581
               

               
Cow position:
               
chr24:7986360-7985890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-583
               

               
Cow position:
               
chr24:39160016-39159554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 39
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:4637564-4637095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 145
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:9044841-9044368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:9365945-9365472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:10035188-10034715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:12518669-12519142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:13042137-13041664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:18970978-18970515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
234, 13
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:29097617-29097145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:36326213-36326686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-584
               

               
Cow position:
               
chr24:42693883-42693410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:207150-206679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 241
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:5929634-5930104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 97
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:6149558-6150018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 80
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:7596707-7596234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:7782275-7781801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:8331642-8331179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
217, 45
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:11215532-11215058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:12696268-12695794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:14353201-14353675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:15026587-15026113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:17364126-17363653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 152
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:25710183-25709694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 277
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:35877405-35876932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:36555303-36554838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
109-585
               

               
Cow position:
               
chr24:37142163-37142637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:1841015-1840538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:2118726-2119201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 262
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:4666936-4667412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 255
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:8754371-8754843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:13492351-13492830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 264
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:16267296-16267770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:28554033-28553556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 281
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:31323813-31324283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 174
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:40381982-40381507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 138
               

               
Conread position:
               
109-588
               

               
Cow position:
               
chr24:40427836-40427366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 206
               

               
Conread position:
               
109-589
               

               
Cow position:
               
chr24:5849886-5849393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
109-589
               

               
Cow position:
               
chr24:32370392-32369918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 279
               

               
Conread position:
               
109-589
               

               
Cow position:
               
chr24:43506987-43506508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 80
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:202108-201637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 229
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:6160559-6160089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 245
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:17105039-17104570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:18374318-18374768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:18742045-18741572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 158
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:21211062-21210584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 241
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:23616220-23616696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:24250249-24250731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 301
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:27905953-27906438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 302
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:32823278-32822771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
81, 164
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:33372083-33372555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:33943927-33944401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 16
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:34564650-34565123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 39
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:39681389-39681856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 173
               

               
Conread position:
               
109-590
               

               
Cow position:
               
chr24:43432306-43432790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
109-591
               

               
Cow position:
               
chr24:12264172-12263707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
109-592
               

               
Cow position:
               
chr24:25372958-25373441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr24:3163326-3163810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 261
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr24:11886689-11887167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
475, 107
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr24:15247095-15246636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr24:28303825-28303358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 291
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr24:29064118-29063651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 171
               

               
Conread position:
               
109-595
               

               
Cow position:
               
chr24:31811713-31812196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 27
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr24:599837-599352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr24:12377261-12376775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr24:12701229-12700742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr24:15810306-15809820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr24:28494599-28495086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 262
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr24:36308432-36308917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 234
               

               
Conread position:
               
109-596
               

               
Cow position:
               
chr24:43906714-43907197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 206
               

               
Conread position:
               
109-615
               

               
Cow position:
               
chr24:20024137-20024641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 90
               

               
Conread position:
               
109-617
               

               
Cow position:
               
chr24:32693230-32693749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 170
               

               
Conread position:
               
109-635
               

               
Cow position:
               
chr24:6141431-6140906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 220
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr24:40497875-40497704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-290
               

               
Cow position:
               
chr24:8886408-8886594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
110-290
               

               
Cow position:
               
chr24:18604709-18604884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
110-294
               

               
Cow position:
               
chr24:17833923-17833734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
59, 150
               

               
Conread position:
               
110-294
               

               
Cow position:
               
chr24:37984821-37984638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
110-302
               

               
Cow position:
               
chr24:41063313-41063509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 85
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr24:16401574-16401366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 171
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr24:43449288-43449080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
110-327
               

               
Cow position:
               
chr24:31758445-31758237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
110-330
               

               
Cow position:
               
chr24:1066610-1066382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
110-365
               

               
Cow position:
               
chr24:19073923-19074182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
110-371
               

               
Cow position:
               
chr24:27484680-27484419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
216, 148
               

               
Conread position:
               
110-380
               

               
Cow position:
               
chr24:32070188-32070467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 176
               

               
Conread position:
               
110-395
               

               
Cow position:
               
chr24:27732636-27732342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
110-410
               

               
Cow position:
               
chr24:15793159-15792860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 66
               

               
Conread position:
               
110-416
               

               
Cow position:
               
chr24:40149542-40149234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
110-421
               

               
Cow position:
               
chr24:9901227-9901539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-422
               

               
Cow position:
               
chr24:33639641-33639329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-434
               

               
Cow position:
               
chr24:40518756-40518430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
110-441
               

               
Cow position:
               
chr24:24583272-24582935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
51, 305
               

               
Conread position:
               
110-452
               

               
Cow position:
               
chr24:14378646-14378316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
110-463
               

               
Cow position:
               
chr24:31308952-31309304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 81
               

               
Conread position:
               
110-466
               

               
Cow position:
               
chr24:33379580-33379934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
110-470
               

               
Cow position:
               
chr24:18222638-18222277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 298
               

               
Conread position:
               
110-488
               

               
Cow position:
               
chr24:18847442-18847800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
339, 128
               

               
Conread position:
               
110-488
               

               
Cow position:
               
chr24:38296913-38297291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-513
               

               
Cow position:
               
chr24:16610924-16610519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr24:9550115-9550521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 295
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr24:10655468-10655874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr24:12090828-12091235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 296
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr24:15880943-15881348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 260
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr24:19815558-19815152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 284
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr24:38588635-38589038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
110-514
               

               
Cow position:
               
chr24:39253781-39254187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-520
               

               
Cow position:
               
chr24:7030623-7030222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
73, 158
               

               
Conread position:
               
110-528
               

               
Cow position:
               
chr24:14279413-14279834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
110-530
               

               
Cow position:
               
chr24:40056193-40055786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
110-533
               

               
Cow position:
               
chr24:33230193-33230622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 34
               

               
Conread position:
               
110-540
               

               
Cow position:
               
chr24:34396614-34396221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
382, 136
               

               
Conread position:
               
110-543
               

               
Cow position:
               
chr24:12234782-12234373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
110-560
               

               
Cow position:
               
chr24:39492829-39493267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 29
               

               
Conread position:
               
110-564
               

               
Cow position:
               
chr24:16557128-16556663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
91, 176
               

               
Conread position:
               
110-579
               

               
Cow position:
               
chr24:24137326-24136872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 87
               

               
Conread position:
               
110-579
               

               
Cow position:
               
chr24:36486536-36486076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
110-584
               

               
Cow position:
               
chr24:17406923-17407383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
110-585
               

               
Cow position:
               
chr24:6325515-6325042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 261
               

               
Conread position:
               
110-589
               

               
Cow position:
               
chr24:18732587-18732103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 46
               

               
Conread position:
               
110-589
               

               
Cow position:
               
chr24:32205277-32204796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 306
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr24:19466406-19465917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 31
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr24:27052963-27052494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 20
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr24:27290402-27290871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 175
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr24:29679781-29679310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr24:30484408-30483948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
110-595
               

               
Cow position:
               
chr24:28062473-28062954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 79
               

               
Conread position:
               
111-246
               

               
Cow position:
               
chr24:31357387-31357523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
111-256
               

               
Cow position:
               
chr24:25543354-25543211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
111-281
               

               
Cow position:
               
chr24:31816081-31816249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
111-290
               

               
Cow position:
               
chr24:5939089-5939270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
111-290
               

               
Cow position:
               
chr24:27889380-27889201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
83, 77
               

               
Conread position:
               
111-312
               

               
Cow position:
               
chr24:18331212-18331422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
111-340
               

               
Cow position:
               
chr24:21555544-21555775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 145
               

               
Conread position:
               
111-365
               

               
Cow position:
               
chr24:37080861-37080611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
111-367
               

               
Cow position:
               
chr24:33291647-33291397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 169
               

               
Conread position:
               
111-413
               

               
Cow position:
               
chr24:14363553-14363252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
223, 239
               

               
Conread position:
               
111-413
               

               
Cow position:
               
chr24:31003198-31002909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
212, 49
               

               
Conread position:
               
111-422
               

               
Cow position:
               
chr24:6067489-6067180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
216, 175
               

               
Conread position:
               
111-434
               

               
Cow position:
               
chr24:42249424-42249100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 176
               

               
Conread position:
               
111-450
               

               
Cow position:
               
chr24:38479420-38479110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
255, 81
               

               
Conread position:
               
111-465
               

               
Cow position:
               
chr24:28689243-28689584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
111-515
               

               
Cow position:
               
chr24:36722258-36722669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 274
               

               
Conread position:
               
111-533
               

               
Cow position:
               
chr24:27763330-27763736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 57
               

               
Conread position:
               
111-543
               

               
Cow position:
               
chr24:35568702-35569140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
7, 226
               

               
Conread position:
               
111-590
               

               
Cow position:
               
chr24:29596279-29595809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 114
               

               
Conread position:
               
111-590
               

               
Cow position:
               
chr24:30545358-30544862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 337
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr24:7001541-7001059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 95
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr24:18025437-18024964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 48
               

               
Conread position:
               
111-595
               

               
Cow position:
               
chr24:35675082-35675546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 161
               

               
Conread position:
               
112-382
               

               
Cow position:
               
chr24:25524600-25524871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
112-518
               

               
Cow position:
               
chr24:33621958-33621563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 293
               

               
Conread position:
               
112-531
               

               
Cow position:
               
chr24:32213142-32212723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
112-539
               

               
Cow position:
               
chr24:25991635-25991210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
112-544
               

               
Cow position:
               
chr24:38002207-38001784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
68, 142
               

               
Conread position:
               
112-569
               

               
Cow position:
               
chr24:18266636-18266183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 93
               

               
Conread position:
               
112-589
               

               
Cow position:
               
chr24:9070907-9070440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 279
               

               
Conread position:
               
112-591
               

               
Cow position:
               
chr24:17955922-17955441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 204
               

               
Conread position:
               
112-595
               

               
Cow position:
               
chr24:27844992-27844521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 291
               

               
Conread position:
               
113-469
               

               
Cow position:
               
chr24:2993401-2993040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
113-470
               

               
Cow position:
               
chr24:37975541-37975190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
113-496
               

               
Cow position:
               
chr24:2731050-2730662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
142, 76
               

               
Conread position:
               
113-595
               

               
Cow position:
               
chr24:38814503-38814974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 168
               

               
Conread position:
               
114-590
               

               
Cow position:
               
chr24:32609164-32609647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 295
               

               
Conread position:
               
115-590
               

               
Cow position:
               
chr24:15472885-15473358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
116-403
               

               
Cow position:
               
chr24:39977270-39976987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
17, 210
               

               
Conread position:
               
116-514
               

               
Cow position:
               
chr24:6085458-6085858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 255
               

               
Conread position:
               
116-525
               

               
Cow position:
               
chr24:9087940-9087540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
332, 189
               

               
Conread position:
               
116-583
               

               
Cow position:
               
chr24:28721413-28721882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 43
               

               
Conread position:
               
116-585
               

               
Cow position:
               
chr24:6450064-6450501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
376, 165
               

               
Conread position:
               
116-590
               

               
Cow position:
               
chr24:814730-814261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 165
               

               
Conread position:
               
116-590
               

               
Cow position:
               
chr24:39219310-39218840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 81
               

               
Conread position:
               
116-595
               

               
Cow position:
               
chr24:32125096-32124631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
116-600
               

               
Cow position:
               
chr24:20368424-20368911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 255
               

               
Conread position:
               
117-303
               

               
Cow position:
               
chr24:41241711-41241900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
117-382
               

               
Cow position:
               
chr24:33518460-33518190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
117-469
               

               
Cow position:
               
chr24:5644054-5643695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
85, 295
               

               
Conread position:
               
118-303
               

               
Cow position:
               
chr24:27608611-27608421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
118-403
               

               
Cow position:
               
chr24:29369733-29369436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
118-405
               

               
Cow position:
               
chr24:22187580-22187294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 247
               

               
Conread position:
               
118-409
               

               
Cow position:
               
chr24:16994009-16993718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
208, 79
               

               
Conread position:
               
118-409
               

               
Cow position:
               
chr24:34870333-34870050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
118-441
               

               
Cow position:
               
chr24:24025174-24025502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 295
               

               
Conread position:
               
118-451
               

               
Cow position:
               
chr24:26555360-26555696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
118-513
               

               
Cow position:
               
chr24:35795735-35795351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
207, 15
               

               
Conread position:
               
118-589
               

               
Cow position:
               
chr24:3153051-3152580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 186
               

               
Conread position:
               
119-281
               

               
Cow position:
               
chr24:27747948-27748104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr24:28290031-28289838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
119-409
               

               
Cow position:
               
chr24:3851460-3851751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 252
               

               
Conread position:
               
119-513
               

               
Cow position:
               
chr24:1862032-1861636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 252
               

               
Conread position:
               
119-584
               

               
Cow position:
               
chr24:13872320-13872783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 252
               

               
Conread position:
               
119-590
               

               
Cow position:
               
chr24:43634967-43635438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 75
               

               
Conread position:
               
120-470
               

               
Cow position:
               
chr24:12508031-12508378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
205, 86
               

               
Conread position:
               
122-278
               

               
Cow position:
               
chr24:6676665-6676821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-301
               

               
Cow position:
               
chr24:11934019-11933833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
127-354
               

               
Cow position:
               
chr24:9767996-9768223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
127-590
               

               
Cow position:
               
chr24:20225284-20225740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
127-590
               

               
Cow position:
               
chr24:29673063-29673522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 62
               

               
Conread position:
               
130-290
               

               
Cow position:
               
chr24:6151230-6151395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
130-403
               

               
Cow position:
               
chr24:6080348-6080622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
130-525
               

               
Cow position:
               
chr24:3631063-3631447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 245
               

               
Conread position:
               
130-569
               

               
Cow position:
               
chr24:28353705-28354134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
131-281
               

               
Cow position:
               
chr24:19804006-19804156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-281
               

               
Cow position:
               
chr24:42943604-42943451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
131-303
               

               
Cow position:
               
chr24:24310507-24310683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
131-331
               

               
Cow position:
               
chr24:33428453-33428654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
131-331
               

               
Cow position:
               
chr24:35026996-35026798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
131-335
               

               
Cow position:
               
chr24:28784547-28784757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
131-413
               

               
Cow position:
               
chr24:21769997-21770282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
131-413
               

               
Cow position:
               
chr24:35066916-35066632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
131-414
               

               
Cow position:
               
chr24:2300317-2300602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
131-462
               

               
Cow position:
               
chr24:22196371-22196696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 164
               

               
Conread position:
               
131-462
               

               
Cow position:
               
chr24:30766415-30766750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 122
               

               
Conread position:
               
131-506
               

               
Cow position:
               
chr24:6413353-6413730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
131-513
               

               
Cow position:
               
chr24:6157752-6157363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr24:11327233-11327624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 275
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr24:22975683-22976065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 274
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr24:23034212-23034597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 274
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr24:23052024-23051640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
131-533
               

               
Cow position:
               
chr24:29170523-29170916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 154
               

               
Conread position:
               
131-535
               

               
Cow position:
               
chr24:5608416-5608820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
318, 276
               

               
Conread position:
               
131-539
               

               
Cow position:
               
chr24:37876783-37877191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
131-544
               

               
Cow position:
               
chr24:38266734-38267146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
131-547
               

               
Cow position:
               
chr24:27593625-27593208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 275
               

               
Conread position:
               
131-584
               

               
Cow position:
               
chr24:27148954-27149393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 163
               

               
Conread position:
               
131-590
               

               
Cow position:
               
chr24:44987826-44987375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 97
               

               
Conread position:
               
131-628
               

               
Cow position:
               
chr24:11734285-11734764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 37
               

               
Conread position:
               
131-652
               

               
Cow position:
               
chr24:27874153-27874661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 67
               

               
Conread position:
               
132-289
               

               
Cow position:
               
chr24:31256718-31256556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
132-451
               

               
Cow position:
               
chr24:37229937-37230259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 249
               

               
Conread position:
               
132-502
               

               
Cow position:
               
chr24:6341714-6342090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
132-525
               

               
Cow position:
               
chr24:2391739-2392135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
132-587
               

               
Cow position:
               
chr24:30860173-30860634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
132-588
               

               
Cow position:
               
chr24:16625949-16625488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 6
               

               
Conread position:
               
132-589
               

               
Cow position:
               
chr24:17860728-17860259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 157
               

               
Conread position:
               
133-302
               

               
Cow position:
               
chr24:4354807-4354976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-513
               

               
Cow position:
               
chr24:12697534-12697152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 238
               

               
Conread position:
               
133-514
               

               
Cow position:
               
chr24:22954420-22954803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 238
               

               
Conread position:
               
133-514
               

               
Cow position:
               
chr24:27852515-27852132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 238
               

               
Conread position:
               
133-514
               

               
Cow position:
               
chr24:32359265-32358890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
206, 27
               

               
Conread position:
               
133-522
               

               
Cow position:
               
chr24:20970243-20969864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
133-596
               

               
Cow position:
               
chr24:29788409-29787946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 239
               

               
Conread position:
               
133-613
               

               
Cow position:
               
chr24:38643179-38643657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 277
               

               
Conread position:
               
134-338
               

               
Cow position:
               
chr24:27039429-27039637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
134-376
               

               
Cow position:
               
chr24:7527842-7527604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
135-327
               

               
Cow position:
               
chr24:16079932-16079745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
135-351
               

               
Cow position:
               
chr24:13512840-13512624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-535
               

               
Cow position:
               
chr24:33098942-33098537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 174
               

               
Conread position:
               
135-590
               

               
Cow position:
               
chr24:18485448-18484994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 41
               

               
Conread position:
               
137-289
               

               
Cow position:
               
chr24:12207441-12207289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-512
               

               
Cow position:
               
chr24:21104532-21104906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 252
               

               
Conread position:
               
137-535
               

               
Cow position:
               
chr24:16870231-16869834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 53
               

               
Conread position:
               
138-466
               

               
Cow position:
               
chr24:5448510-5448184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 60
               

               
Conread position:
               
138-588
               

               
Cow position:
               
chr24:38488405-38488853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 233
               

               
Conread position:
               
139-590
               

               
Cow position:
               
chr24:27683880-27683455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
153, 33
               

               
Conread position:
               
140-280
               

               
Cow position:
               
chr24:14550201-14550062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
140-425
               

               
Cow position:
               
chr24:5624668-5624387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
140-488
               

               
Cow position:
               
chr24:42835367-42835715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 231
               

               
Conread position:
               
141-422
               

               
Cow position:
               
chr24:11748246-11747964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 230
               

               
Conread position:
               
143-413
               

               
Cow position:
               
chr24:36710700-36710969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 24
               

               
Conread position:
               
143-507
               

               
Cow position:
               
chr24:25706270-25705906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
192, 16
               

               
Conread position:
               
144-595
               

               
Cow position:
               
chr24:7917808-7917354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 45
               

               
Conread position:
               
145-590
               

               
Cow position:
               
chr24:40129674-40130129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
147-573
               

               
Cow position:
               
chr24:27185525-27185949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
179, 224
               

               
Conread position:
               
148-595
               

               
Cow position:
               
chr24:10308843-10309260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
177, 58
               

               
Conread position:
               
149-387
               

               
Cow position:
               
chr24:17980780-17981018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
151-313
               

               
Cow position:
               
chr24:41982872-41982712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
151-462
               

               
Cow position:
               
chr24:11045979-11045679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
152-299
               

               
Cow position:
               
chr24:28343807-28343957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
153-348
               

               
Cow position:
               
chr24:10517843-10518039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 36
               

               
Conread position:
               
154-331
               

               
Cow position:
               
chr24:5861979-5862161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
155-470
               

               
Cow position:
               
chr24:14320085-14319769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 251
               

               
Conread position:
               
155-525
               

               
Cow position:
               
chr24:19658116-19658495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 248
               

               
Conread position:
               
155-582
               

               
Cow position:
               
chr24:29180472-29180882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 228
               

               
Conread position:
               
155-588
               

               
Cow position:
               
chr24:15802715-15803152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
171, 216
               

               
Conread position:
               
155-595
               

               
Cow position:
               
chr24:2402805-2402361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
157-427
               

               
Cow position:
               
chr24:8608368-8608634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
168, 116
               

               
Conread position:
               
157-450
               

               
Cow position:
               
chr24:15674731-15674438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 277
               

               
Conread position:
               
158-585
               

               
Cow position:
               
chr24:211555-211982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 247
               

               
Conread position:
               
160-345
               

               
Cow position:
               
chr24:26231228-26231042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
160-449
               

               
Cow position:
               
chr24:42581254-42580970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
172, 23
               

               
Conread position:
               
160-450
               

               
Cow position:
               
chr24:29606482-29606206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 8
               

               
Conread position:
               
160-516
               

               
Cow position:
               
chr24:37246642-37246282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
160-535
               

               
Cow position:
               
chr24:6161272-6160901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 146
               

               
Conread position:
               
161-595
               

               
Cow position:
               
chr24:30235455-30235880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 163
               

               
Conread position:
               
163-514
               

               
Cow position:
               
chr24:5931447-5931795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
5, 210
               

               
Conread position:
               
164-510
               

               
Cow position:
               
chr24:41006429-41006775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
285, 69
               

               
Conread position:
               
167-375
               

               
Cow position:
               
chr24:40274130-40274336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
158, 145
               

               
Conread position:
               
168-590
               

               
Cow position:
               
chr24:28690282-28690685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 10
               

               
Conread position:
               
168-590
               

               
Cow position:
               
chr24:32054254-32054661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 239
               

               
Conread position:
               
169-514
               

               
Cow position:
               
chr24:5130712-5130354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
169, 155
               

               
Conread position:
               
169-514
               

               
Cow position:
               
chr24:32740028-32739686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 183
               

               
Conread position:
               
169-587
               

               
Cow position:
               
chr24:28497003-28496585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 237
               

               
Conread position:
               
172-337
               

               
Cow position:
               
chr24:6416264-6416425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
172-337
               

               
Cow position:
               
chr24:15617699-15617863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
172-371
               

               
Cow position:
               
chr24:16378702-16378510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr24:13354460-13354107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
154, 6
               

               
Conread position:
               
172-520
               

               
Cow position:
               
chr24:28029116-28028774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
172-544
               

               
Cow position:
               
chr24:37205285-37204921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
153, 39
               

               
Conread position:
               
172-590
               

               
Cow position:
               
chr24:3493484-3493884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 32
               

               
Conread position:
               
172-590
               

               
Cow position:
               
chr24:35986123-35985730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 111
               

               
Conread position:
               
173-321
               

               
Cow position:
               
chr24:40210089-40209941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
174-292
               

               
Cow position:
               
chr24:35795844-35795726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
174-320
               

               
Cow position:
               
chr24:5151642-5151783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
176-529
               

               
Cow position:
               
chr24:12851330-12851658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
273, 84
               

               
Conread position:
               
178-590
               

               
Cow position:
               
chr24:14337324-14337735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 231
               

               
Conread position:
               
179-343
               

               
Cow position:
               
chr24:28216441-28216605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
179-461
               

               
Cow position:
               
chr24:1272275-1271991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
180-514
               

               
Cow position:
               
chr24:34213638-34213299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
116, 228
               

               
Conread position:
               
183-365
               

               
Cow position:
               
chr24:23988149-23988332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
155, 0
               
UCSC Genome Browser

               
Conread position:
               
183-388
               

               
Cow position:
               
chr24:32419622-32419828 (view  custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
142, 0
               
UCSC Genome Browser

               
               
               
Conread position:
183-408

               
               
               
Cow position:
chr24:13238009-13238232 (view  custom track)

               
               
               
Alignm length:
227

               
               
               
Alignm identity:
160

               
               
               
Alignm E-value:
1e-31

               
               
               
Alignm gaps (pig, cow):
142, 38
UCSC Genome Browser

               
               
               
Conread position:
183-507

               
               
               
Cow position:
chr24:25664729-25665047 (view  custom track)

               
               
               
Alignm length:
329

               
               
               
Alignm identity:
220

               
               
               
Alignm E-value:
3e-32

               
               
               
Alignm gaps (pig, cow):
145, 168

               
               
               Conread position:183-547
               
               
               Cow position:chr24:18257471-18257114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):141, 214

               
               
               Conread position:183-590
               
               
               Cow position:chr24:2674931-2675315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:411
               
               
               Alignm identity:297
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):92, 72

               
               
               Conread position:184-412
               
               
               Cow position:chr24:30514997-30515215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:161
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:184-450
               
               
               Cow position:chr24:32668880-32669142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):115, 21

               
               
               Conread position:184-523
               
               
               Cow position:chr24:6071199-6071534 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):265, 6

               
               
               Conread position:185-365
               
               
               Cow position:chr24:32087558-32087378 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:132
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):140, 107

               
               
               Conread position:185-449
               
               
               Cow position:chr24:41963235-41963491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):147, 94

               
               
               Conread position:185-469
               
               
               Cow position:chr24:32014726-32015009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:205
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):30, 5

               
               
               Conread position:185-510
               
               
               Cow position:chr24:17993073-17992747 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:226
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):140, 165

               
               
               Conread position:185-514
               
               
               Cow position:chr24:274239-273909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:226
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):141, 186

               
               
               Conread position:185-520
               
               
               Cow position:chr24:20862359-20862024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:234
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):109, 6

               
               
               Conread position:185-584
               
               
               Cow position:chr24:17251865-17251468 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:268
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):141, 186

               
               
               Conread position:186-425
               
               
               Cow position:chr24:44054537-44054302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:173
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):144, 31

               
               
               Conread position:186-461
               
               
               Cow position:chr24:8810709-8810986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):106, 26

               
               
               Conread position:186-579
               
               
               Cow position:chr24:6340620-6340995 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):141, 18

               
               
               Conread position:188-305
               
               
               Cow position:chr24:24457956-24457840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:118
               
               
               Alignm identity:92
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):95, 0

               
               
               Conread position:189-514
               
               
               Cow position:chr24:16993715-16993388 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:222
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):137, 182

               
               
               Conread position:190-513
               
               
               Cow position:chr24:6090923-6091248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:225
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):136, 181

               
               
               Conread position:190-580
               
               
               Cow position:chr24:44041400-44041015 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:279
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):136, 84

               
               
               Conread position:190-589
               
               
               Cow position:chr24:41985572-41985995 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:426
               
               
               Alignm identity:285
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):96, 253

               
               
               Conread position:191-514
               
               
               Cow position:chr24:13880661-13880988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:221
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):11, 182

               
               
               Conread position:192-595
               
               
               Cow position:chr24:33153396-33153783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:300
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):136, 57

               
               
               Conread position:193-412
               
               
               Cow position:chr24:228119-227897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:161
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):132, 42

               
               
               Conread position:195-514
               
               
               Cow position:chr24:16298374-16298685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):254, 81

               
               
               Conread position:196-514
               
               
               Cow position:chr24:15875018-15874698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:221
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):130, 215

               
               
               Conread position:196-514
               
               
               Cow position:chr24:43384366-43384686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:214
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):130, 175

               
               
               Conread position:196-590
               
               
               Cow position:chr24:42102981-42103374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):11, 124

               
               
               Conread position:196-595
               
               
               Cow position:chr24:3165437-3165825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):130, 68

               
               
               Conread position:197-318
               
               
               Cow position:chr24:27096272-27096395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:98
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:200-635
               
               
               Cow position:chr24:13625905-13626328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:441
               
               
               Alignm identity:279
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):126, 152

               
               
               Conread position:201-514
               
               
               Cow position:chr24:4241080-4240765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:213
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):124, 204

               
               
               Conread position:201-514
               
               
               Cow position:chr24:28221350-28221035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:214
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):125, 170

               
               
               Conread position:203-504
               
               
               Cow position:chr24:12448014-12448318 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):123, 168

               
               
               Conread position:203-585
               
               
               Cow position:chr24:11080260-11079879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:253
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):123, 168

               
               
               Conread position:205-350
               
               
               Cow position:chr24:30965064-30964918 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:107
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):120, 0

               
               
               Conread position:205-596
               
               
               Cow position:chr24:3006406-3006797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:255
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):123, 206

               
               
               Conread position:206-438
               
               
               Cow position:chr24:16143501-16143732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:154
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):119, 202

               
               
               Conread position:206-449
               
               
               Cow position:chr24:25894459-25894701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):90, 77

               
               
               Conread position:206-489
               
               
               Cow position:chr24:39289638-39289917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:210
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):159, 118

               
               
               Conread position:206-512
               
               
               Cow position:chr24:12498622-12498924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:206
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):189, 75

               
               
               Conread position:209-378
               
               
               Cow position:chr24:9762173-9762004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:120
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:209-412
               
               
               Cow position:chr24:18846631-18846840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):82, 172

               
               
               Conread position:209-525
               
               
               Cow position:chr24:27543851-27543539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):116, 181

               
               
               Conread position:209-589
               
               
               Cow position:chr24:39483101-39483477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):116, 102

               
               
               Conread position:209-595
               
               
               Cow position:chr24:23556703-23556331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):298, 62

               
               
               Conread position:210-461
               
               
               Cow position:chr24:28233016-28233264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):77, 97

               
               
               Conread position:213-471
               
               
               Cow position:chr24:11874995-11874749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):234, 70

               
               
               Conread position:213-491
               
               
               Cow position:chr24:6956813-6957080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):117, 59

               
               
               Conread position:213-590
               
               
               Cow position:chr24:43363989-43364361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):69, 34

               
               
               Conread position:213-595
               
               
               Cow position:chr24:20874309-20874689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):117, 52

               
               
               Conread position:214-376
               
               
               Cow position:chr24:29499472-29499633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):76, 0

               
               
               Conread position:214-422
               
               
               Cow position:chr24:10311794-10312010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):68, 164

               
               
               Conread position:214-497
               
               
               Cow position:chr24:40249639-40249924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):112, 197

               
               
               Conread position:214-510
               
               
               Cow position:chr24:38684473-38684178 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:204
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):111, 128

               
               
               Conread position:214-514
               
               
               Cow position:chr24:8873438-8873141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:212
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):128, 177

               
               
               Conread position:214-570
               
               
               Cow position:chr24:37546692-37547047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:234
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):112, 214

               
               
               Conread position:214-595
               
               
               Cow position:chr24:37650309-37650681 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:388
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 67

               
               
               Conread position:215-422
               
               
               Cow position:chr24:40781947-40781739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:215-501
               
               
               Cow position:chr24:20923233-20923498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:205
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:215-514
               
               
               Cow position:chr24:40247467-40247765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:201
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):149, 114

               
               
               Conread position:215-589
               
               
               Cow position:chr24:18405673-18405312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):231, 114

               
               
               Conread position:216-514
               
               
               Cow position:chr24:33571632-33571932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:203
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):110, 155

               
               
               Conread position:216-518
               
               
               Cow position:chr24:25320624-25320927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):120, 65

               
               
               Conread position:216-585
               
               
               Cow position:chr24:33573467-33573100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:243
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):110, 155

               
               
               Conread position:217-466
               
               
               Cow position:chr24:15288490-15288737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:192
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):108, 188

               
               
               Conread position:217-514
               
               
               Cow position:chr24:40259780-40260079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):107, 154

               
               
               Conread position:217-595
               
               
               Cow position:chr24:39850244-39849879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:385
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):120, 112

               
               
               Conread position:218-514
               
               
               Cow position:chr24:36853854-36854153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):120, 13

               
               
               Conread position:219-510
               
               
               Cow position:chr24:6921740-6922033 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):107, 152

               
               
               Conread position:220-422
               
               
               Cow position:chr24:5561603-5561810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):106, 151

               
               
               Conread position:221-412
               
               
               Cow position:chr24:41206746-41206556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):107, 150

               
               
               Conread position:221-579
               
               
               Cow position:chr24:634627-634966 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:249
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):132, 139

               
               
               Conread position:221-595
               
               
               Cow position:chr24:24491373-24491010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):114, 65

               
               
               Conread position:222-401
               
               
               Cow position:chr24:185175-184996 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):104, 61

               
               
               Conread position:223-510
               
               
               Cow position:chr24:26385018-26384729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):116, 194

               
               
               Conread position:226-514
               
               
               Cow position:chr24:19707212-19707496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:199
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):99, 55

               
               
               Conread position:226-549
               
               
               Cow position:chr24:9590373-9590047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:222
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):223, 66

               
               
               Conread position:226-581
               
               
               Cow position:chr24:29027694-29028032 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):266, 59

               
               
               Conread position:227-508
               
               
               Cow position:chr24:34532766-34533049 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:205
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):103, 190

               
               
               Conread position:227-541
               
               
               Cow position:chr24:28332635-28332315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:239
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):65, 103

               
               
               Conread position:228-413
               
               
               Cow position:chr24:28911326-28911507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:131
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):97, 66

               
               
               Conread position:228-450
               
               
               Cow position:chr24:42916884-42916669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):165, 0

               
               
               Conread position:228-584
               
               
               Cow position:chr24:27688108-27687754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:233
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):98, 143

               
               
               Conread position:229-516
               
               
               Cow position:chr24:38374933-38375214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:209
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):12, 20

               
               
               Conread position:229-588
               
               
               Cow position:chr24:27197325-27196968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:238
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):97, 142

               
               
               Conread position:230-516
               
               
               Cow position:chr24:21252804-21252519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:191
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):95, 175

               
               
               Conread position:230-534
               
               
               Cow position:chr24:27267284-27267581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:228
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):95, 53

               
               
               Conread position:230-581
               
               
               Cow position:chr24:33724219-33723850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:249
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):35, 237

               
               
               Conread position:230-585
               
               
               Cow position:chr24:15057037-15057394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 98

               
               
               Conread position:230-588
               
               
               Cow position:chr24:4228266-4228622 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:364
               
               
               Alignm identity:229
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):96, 141

               
               
               Conread position:233-534
               
               
               Cow position:chr24:31370099-31369800 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:211
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):92, 166

               
               
               Conread position:234-520
               
               
               Cow position:chr24:7301108-7301394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:208
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):177, 36

               
               
               Conread position:236-470
               
               
               Cow position:chr24:19444382-19444150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):168, 0

               
               
               Conread position:236-595
               
               
               Cow position:chr24:43028680-43028323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:250
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):56, 175

               
               
               Conread position:237-514
               
               
               Cow position:chr24:2226447-2226168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):89, 134

               
               
               Conread position:237-514
               
               
               Cow position:chr24:12957067-12956792 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):89, 134

               
               
               Conread position:237-591
               
               
               Cow position:chr24:15508890-15508537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:255
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):52, 140

               
               
               Conread position:238-510
               
               
               Cow position:chr24:24498518-24498250 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:190
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):87, 161

               
               
               Conread position:241-514
               
               
               Cow position:chr24:24107532-24107257 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:185
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):85, 130

               
               
               Conread position:241-533
               
               
               Cow position:chr24:5435385-5435100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:201
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):17, 45

               
               
               Conread position:241-564
               
               
               Cow position:chr24:17159411-17159724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:221
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):84, 56

               
               
               Conread position:241-589
               
               
               Cow position:chr24:5754498-5754835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:254
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):89, 138

               
               
               Conread position:241-595
               
               
               Cow position:chr24:3430379-3430740 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:267
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):46, 158

               
               
               Conread position:242-590
               
               
               Cow position:chr24:34272460-34272809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:236
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):83, 189

               
               
               Conread position:246-590
               
               
               Cow position:chr24:28319544-28319209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:249
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):48, 150

               
               
               Conread position:248-450
               
               
               Cow position:chr24:33338049-33337848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):78, 123

               
               
               Conread position:248-512
               
               
               Cow position:chr24:27735907-27735649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):202, 71

               
               
               Conread position:249-541
               
               
               Cow position:chr24:8770251-8770536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:204
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):13, 39

               
               
               Conread position:251-530
               
               
               Cow position:chr24:12466697-12466425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:196
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):148, 98

               
               
               Conread position:252-470
               
               
               Cow position:chr24:20988332-20988120 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):73, 116

               
               
               Conread position:252-525
               
               
               Cow position:chr24:38347347-38347623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):80, 164

               
               
               Conread position:252-588
               
               
               Cow position:chr24:27675115-27675449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:218
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):74, 119

               
               
               Conread position:252-589
               
               
               Cow position:chr24:40300824-40301159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:238
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):78, 31

               
               
               Conread position:253-589
               
               
               Cow position:chr24:17311540-17311218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):74, 152

               
               
               Conread position:254-589
               
               
               Cow position:chr24:34315029-34315355 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:237
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):195, 38

               
               
               Conread position:256-515
               
               
               Cow position:chr24:18734688-18734423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:199
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):79, 104

               
               
               Conread position:257-541
               
               
               Cow position:chr24:40908689-40908976 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:215
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):69, 118

               
               
               Conread position:257-588
               
               
               Cow position:chr24:42007419-42007738 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:232
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):197, 142

               
               
               Conread position:260-607
               
               
               Cow position:chr24:26929273-26928927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:232
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):65, 173

               
               
               Conread position:264-488
               
               
               Cow position:chr24:9222696-9222472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:155
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):61, 141

               
               
               Conread position:265-580
               
               
               Cow position:chr24:29781843-29782155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 118

               
               
               Conread position:265-588
               
               
               Cow position:chr24:27341343-27341024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:238
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):61, 143

               
               
               Conread position:266-514
               
               
               Cow position:chr24:20894826-20895076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):60, 139

               
               
               Conread position:266-541
               
               
               Cow position:chr24:5998902-5998628 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):60, 105

               
               
               Conread position:267-579
               
               
               Cow position:chr24:39842166-39841856 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:207
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):52, 83

               
               
               Conread position:270-459
               
               
               Cow position:chr24:14550192-14550378 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:135
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):60, 12

               
               
               Conread position:270-584
               
               
               Cow position:chr24:13497298-13497610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:202
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):56, 141

               
               
               Conread position:270-590
               
               
               Cow position:chr24:34742431-34742753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):12, 92

               
               
               Conread position:270-591
               
               
               Cow position:chr24:15861911-15861597 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:226
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):69, 37

               
               
               Conread position:270-595
               
               
               Cow position:chr24:30177922-30178248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 120

               
               
               Conread position:271-540
               
               
               Cow position:chr24:34761586-34761852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):178, 15

               
               
               Conread position:272-588
               
               
               Cow position:chr24:35332407-35332721 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:212
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):54, 70

               
               
               Conread position:277-586
               
               
               Cow position:chr24:18974894-18975200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:215
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):8, 15

               
               
               Conread position:277-586
               
               
               Cow position:chr24:25885464-25885162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:218
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):53, 23

               
               
               Conread position:277-595
               
               
               Cow position:chr24:31816274-31816585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:233
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):8, 132

               
               
               Conread position:277-618
               
               
               Cow position:chr24:35795049-35794705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:258
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):8, 96

               
               
               Conread position:279-543
               
               
               Cow position:chr24:21768337-21768602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):46, 126

               
               
               Conread position:280-615
               
               
               Cow position:chr24:42345312-42344969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:224
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):50, 30

               
               
               Conread position:283-564
               
               
               Cow position:chr24:6914065-6913789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:202
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):43, 92

               
               
               Conread position:284-590
               
               
               Cow position:chr24:2970907-2970605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:199
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):12, 36

               
               
               Conread position:286-590
               
               
               Cow position:chr24:43200573-43200270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:223
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):6, 118

               
               
               Conread position:287-483
               
               
               Cow position:chr24:19804390-19804585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:146
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):43, 119

               
               
               Conread position:287-587
               
               
               Cow position:chr24:35405868-35405567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:206
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):38, 119

               
               
               Conread position:291-512
               
               
               Cow position:chr24:7079498-7079716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:151
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):182, 39

               
               
               Conread position:291-590
               
               
               Cow position:chr24:34369299-34369006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:198
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):202, 33

               
               
               Conread position:292-451
               
               
               Cow position:chr24:15639192-15639033 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:118
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):144, 112

               
               
               Conread position:293-494
               
               
               Cow position:chr24:39607845-39607647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):31, 58

               
               
               Conread position:293-533
               
               
               Cow position:chr24:40184330-40184571 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):13, 59

               
               
               Conread position:293-548
               
               
               Cow position:chr24:44702687-44702936 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:165
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:293-577
               
               
               Cow position:chr24:27941299-27941026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:216
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 80

               
               
               Conread position:293-584
               
               
               Cow position:chr24:39258873-39259155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:200
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):37, 110

               
               
               Conread position:293-590
               
               
               Cow position:chr24:8886625-8886908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:194
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):45, 96

               
               
               Conread position:293-591
               
               
               Cow position:chr24:6508054-6507765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:203
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):229, 105

               
               
               Conread position:293-595
               
               
               Cow position:chr24:23695186-23694902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:219
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):45, 24

               
               
               Conread position:294-589
               
               
               Cow position:chr24:45004665-45004946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):36, 24

               
               
               Conread position:298-590
               
               
               Cow position:chr24:30229180-30229473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:213
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):29, 103

               
               
               Conread position:300-590
               
               
               Cow position:chr24:41980947-41980659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:191
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):13, 30

               
               
               Conread position:301-591
               
               
               Cow position:chr24:35073809-35074096 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:212
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):25, 98

               
               
               Conread position:303-516
               
               
               Cow position:chr24:25424782-25424986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):35, 114

               
               
               Conread position:306-470
               
               
               Cow position:chr24:43832082-43832237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:306-496
               
               
               Cow position:chr24:6900546-6900732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):24, 91

               
               
               Conread position:306-580
               
               
               Cow position:chr24:40849886-40850152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:195
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):142, 19

               
               
               Conread position:306-590
               
               
               Cow position:chr24:7913720-7914006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):32, 99

               
               
               Conread position:306-590
               
               
               Cow position:chr24:39955324-39955050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):24, 100

               
               
               Conread position:306-595
               
               
               Cow position:chr24:27726282-27726005 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):24, 79

               
               
               Conread position:306-595
               
               
               Cow position:chr24:27748376-27748647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):217, 19

               
               
               Conread position:307-583
               
               
               Cow position:chr24:27967803-27968077 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):23, 101

               
               
               Conread position:307-585
               
               
               Cow position:chr24:36404424-36404147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):193, 98

               
               
               Conread position:307-595
               
               
               Cow position:chr24:30314313-30314019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 101

               
               
               Conread position:307-596
               
               
               Cow position:chr24:1269527-1269794 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:210
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):31, 83

               
               
               Conread position:308-521
               
               
               Cow position:chr24:18324339-18324556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:158
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):24, 101

               
               
               Conread position:308-590
               
               
               Cow position:chr24:19769222-19769489 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:204
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):22, 82

               
               
               Conread position:309-579
               
               
               Cow position:chr24:41755591-41755852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):183, 20

               
               
               Conread position:309-585
               
               
               Cow position:chr24:43370973-43371239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):21, 102

               
               
               Conread position:310-536
               
               
               Cow position:chr24:35529649-35529868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:157
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):20, 88

               
               
               Conread position:310-590
               
               
               Cow position:chr24:18390562-18390292 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:198
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):138, 73

               
               
               Conread position:310-628
               
               
               Cow position:chr24:19495-19154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:231
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):20, 162

               
               
               Conread position:313-508
               
               
               Cow position:chr24:21522828-21523025 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):12, 92

               
               
               Conread position:313-588
               
               
               Cow position:chr24:24755184-24755445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:197
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):149, 12

               
               
               Conread position:314-591
               
               
               Cow position:chr24:16994624-16994881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):124, 75

               
               
               Conread position:316-568
               
               
               Cow position:chr24:5151967-5152214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):132, 25

               
               
               Conread position:317-470
               
               
               Cow position:chr24:25950934-25950781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):13, 88

               
               
               Conread position:317-578
               
               
               Cow position:chr24:40408213-40407953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):181, 86

               
               
               Conread position:320-531
               
               
               Cow position:chr24:29388982-29389185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:152
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):18, 70

               
               
               Conread position:325-590
               
               
               Cow position:chr24:27039780-27040048 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:184
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):140, 79

               
               
               Conread position:325-595
               
               
               Cow position:chr24:27608356-27608091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):216, 64

               
               
               Conread position:325-595
               
               
               Cow position:chr24:39226740-39227004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):41, 45

               
               
               Conread position:331-589
               
               
               Cow position:chr24:43927574-43927331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:176
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:332-588
               
               
               Cow position:chr24:27824213-27824460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:194
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):180, 51

               
               
               Conread position:334-590
               
               
               Cow position:chr24:2096138-2095882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):158, 64

               
               
               Conread position:335-588
               
               
               Cow position:chr24:18474996-18474731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):159, 35

               
               
               Conread position:335-590
               
               
               Cow position:chr24:20942921-20943168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:179
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):157, 37

               
               
               Conread position:335-595
               
               
               Cow position:chr24:6487672-6487926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:198
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):255, 44

               
               
               Conread position:336-570
               
               
               Cow position:chr24:27207442-27207215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:168
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):112, 62

               
               
               Conread position:336-588
               
               
               Cow position:chr24:42825745-42825500 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:174
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):156, 69

               
               
               Conread position:336-595
               
               
               Cow position:chr24:10498963-10499218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):156, 68

               
               
               Conread position:345-595
               
               
               Cow position:chr24:33222178-33221933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:185
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):149, 54

               
               
               Conread position:347-583
               
               
               Cow position:chr24:31359085-31359314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:168
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):15, 61

               
               
               Conread position:347-595
               
               
               Cow position:chr24:25194030-25194272 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:174
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):143, 58

               
               
               Conread position:352-595
               
               
               Cow position:chr24:20250135-20249889 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):102, 53

               
               
               Conread position:357-590
               
               
               Cow position:chr24:24457473-24457250 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):96, 35

               
               
               Conread position:358-590
               
               
               Cow position:chr24:31036132-31036350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:171
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):134, 31

               
               
               Conread position:368-533
               
               
               Cow position:chr24:29540126-29539962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):124, 39

               
               
               Conread position:369-585
               
               
               Cow position:chr24:40673651-40673434 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):98, 36

               
               
               Conread position:371-590
               
               
               Cow position:chr24:34008793-34008573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:156
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):77, 18

               
               
               Conread position:376-589
               
               
               Cow position:chr24:28990358-28990560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:156
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):120, 29

               
               
               Conread position:380-589
               
               
               Cow position:chr24:6132080-6131870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:149
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):152, 26

               
               
               Conread position:388-590
               
               
               Cow position:chr24:28253502-28253707 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):13, 129

               
               
               Conread position:396-595
               
               
               Cow position:chr24:17492122-17492307 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:146
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):187, 79

               
               
               Conread position:399-589
               
               
               Cow position:chr24:28327275-28327080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:140
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:401-595
               
               
               Cow position:chr24:30897728-30897529 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):14, 127

               
               
               Conread position:406-525
               
               
               Cow position:chr24:17938580-17938699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:122
               
               
               Alignm identity:100
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):86, 14

               
               
               Conread position:406-595
               
               
               Cow position:chr24:23187100-23186912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):86, 62

               
               
               Conread position:411-590
               
               
               Cow position:chr24:32070788-32070963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):75, 119

               
               
               Conread position:413-595
               
               
               Cow position:chr24:18357229-18357045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):91, 59

               
               
               Conread position:413-615
               
               
               Cow position:chr24:37037723-37037928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):81, 41

               
               
               Conread position:419-581
               
               
               Cow position:chr24:35576705-35576544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):32, 122

               
               
               Conread position:432-584
               
               
               Cow position:chr24:4615676-4615526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:118
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):60, 79

               
               
               Conread position:437-585
               
               
               Cow position:chr24:41512101-41511959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:447-590
               
               
               Cow position:chr24:28233907-28234045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:112
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):45, 64

               
               
               Conread position:462-595
               
               
               Cow position:chr24:29561701-29561566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:108
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):76, 85

               
               
               Conread position:464-595
               
               
               Cow position:chr24:39791414-39791548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:106
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):30, 68
Show alignments to all cow chromosomes.