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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8021O16.3
        

               
Conread position:
               
1-834
               

               
Cow position:
               
chr13:34508238-34509146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
914
               

               
Alignm identity:
               
616
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
23-387
               

               
Cow position:
               
chr13:46597596-46597987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
62-816
               

               
Cow position:
               
chr13:29054910-29055734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
63-572
               

               
Cow position:
               
chr13:52775972-52776504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
70-817
               

               
Cow position:
               
chr13:61954749-61953936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr13:6552962-6553302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 337
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr13:30794298-30794621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
73-387
               

               
Cow position:
               
chr13:6418042-6417696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
73-457
               

               
Cow position:
               
chr13:3650799-3651212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
73-644
               

               
Cow position:
               
chr13:9049106-9048466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
73-727
               

               
Cow position:
               
chr13:55338242-55337526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
73-815
               

               
Cow position:
               
chr13:32793835-32794641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
813
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
73-831
               

               
Cow position:
               
chr13:3015683-3014857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 213
               

               
Conread position:
               
73-831
               

               
Cow position:
               
chr13:34762528-34763321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 224
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr13:20563473-20564307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
840
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr13:28132010-28131182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-835
               

               
Cow position:
               
chr13:50189567-50190396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
74-705
               

               
Cow position:
               
chr13:18815228-18815898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
75-822
               

               
Cow position:
               
chr13:11302663-11301889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
75-834
               

               
Cow position:
               
chr13:21836792-21837621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
834
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
80-648
               

               
Cow position:
               
chr13:34190728-34190113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
95-402
               

               
Cow position:
               
chr13:3163022-3163358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
118-382
               

               
Cow position:
               
chr13:60489743-60489457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
122-834
               

               
Cow position:
               
chr13:34871403-34870635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
122-849
               

               
Cow position:
               
chr13:34905150-34905914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
123-373
               

               
Cow position:
               
chr13:53574550-53574820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
128-834
               

               
Cow position:
               
chr13:1590716-1591478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 632
               

               
Conread position:
               
137-365
               

               
Cow position:
               
chr13:46428365-46428116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
139-308
               

               
Cow position:
               
chr13:30651738-30651904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
139-468
               

               
Cow position:
               
chr13:12978122-12978483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 294
               

               
Conread position:
               
142-376
               

               
Cow position:
               
chr13:20175850-20176097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
142-819
               

               
Cow position:
               
chr13:30468698-30469424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
142-834
               

               
Cow position:
               
chr13:34052046-34051306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 611
               

               
Conread position:
               
143-295
               

               
Cow position:
               
chr13:13177000-13177160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-358
               

               
Cow position:
               
chr13:28683924-28684151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
143-364
               

               
Cow position:
               
chr13:1155136-1154900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr13:3430158-3429898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr13:32550163-32549929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr13:33466839-33466579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-398
               

               
Cow position:
               
chr13:43119855-43120135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
143-436
               

               
Cow position:
               
chr13:47007167-47006848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-452
               

               
Cow position:
               
chr13:36346572-36346901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr13:2800303-2799962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-466
               

               
Cow position:
               
chr13:3143797-3144140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
143-473
               

               
Cow position:
               
chr13:30505028-30505382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-503
               

               
Cow position:
               
chr13:28171606-28171993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
143-517
               

               
Cow position:
               
chr13:41807322-41807711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
143-522
               

               
Cow position:
               
chr13:28413872-28414282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
143-528
               

               
Cow position:
               
chr13:31580243-31579843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
143-548
               

               
Cow position:
               
chr13:9537656-9537218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr13:28130607-28131058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
143-571
               

               
Cow position:
               
chr13:49805538-49805994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
143-636
               

               
Cow position:
               
chr13:42114589-42115115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-692
               

               
Cow position:
               
chr13:645343-644754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-695
               

               
Cow position:
               
chr13:56692689-56692084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-698
               

               
Cow position:
               
chr13:20778048-20778646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-720
               

               
Cow position:
               
chr13:837988-838617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-803
               

               
Cow position:
               
chr13:50079148-50079859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-806
               

               
Cow position:
               
chr13:26204040-26204754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-815
               

               
Cow position:
               
chr13:3556830-3556107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-815
               

               
Cow position:
               
chr13:39911815-39911100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-819
               

               
Cow position:
               
chr13:18329706-18330434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-824
               

               
Cow position:
               
chr13:3315042-3314314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr13:4487272-4486538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
143-829
               

               
Cow position:
               
chr13:6664709-6665446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-833
               

               
Cow position:
               
chr13:17496479-17495764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr13:36937139-36936408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr13:38612633-38611900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr13:43974539-43975267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr13:50112885-50112142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr13:53052255-53051512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr13:53156970-53157713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr13:60646166-60646909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
144-410
               

               
Cow position:
               
chr13:32905469-32905758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
144-480
               

               
Cow position:
               
chr13:1839990-1840359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
144-705
               

               
Cow position:
               
chr13:11129833-11130398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
144-815
               

               
Cow position:
               
chr13:5717277-5717962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
145-548
               

               
Cow position:
               
chr13:21135149-21134709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
145-580
               

               
Cow position:
               
chr13:15280705-15280226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
145-645
               

               
Cow position:
               
chr13:5498388-5498932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
145-825
               

               
Cow position:
               
chr13:42086716-42087443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
145-832
               

               
Cow position:
               
chr13:22906856-22907592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
145-834
               

               
Cow position:
               
chr13:15921043-15921781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
146-382
               

               
Cow position:
               
chr13:7365872-7365613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
146-834
               

               
Cow position:
               
chr13:20538153-20538869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 127
               

               
Conread position:
               
147-337
               

               
Cow position:
               
chr13:33332948-33333157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-357
               

               
Cow position:
               
chr13:24690866-24691098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-522
               

               
Cow position:
               
chr13:11821893-11822271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 207
               

               
Conread position:
               
147-580
               

               
Cow position:
               
chr13:4664034-4663561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
147-644
               

               
Cow position:
               
chr13:33162365-33161812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 204
               

               
Conread position:
               
147-718
               

               
Cow position:
               
chr13:22085186-22084568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 330
               

               
Conread position:
               
147-728
               

               
Cow position:
               
chr13:32921896-32922533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 427
               

               
Conread position:
               
147-739
               

               
Cow position:
               
chr13:11826366-11826980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
147-744
               

               
Cow position:
               
chr13:55406114-55405482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
147-765
               

               
Cow position:
               
chr13:5622324-5622954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
147-793
               

               
Cow position:
               
chr13:3784548-3783854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 337
               

               
Conread position:
               
147-815
               

               
Cow position:
               
chr13:34299007-34298277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 608
               

               
Conread position:
               
147-825
               

               
Cow position:
               
chr13:14302570-14303298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 461
               

               
Conread position:
               
147-829
               

               
Cow position:
               
chr13:13903272-13902539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr13:4944807-4944066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 146
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr13:14399658-14400401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 597
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr13:31608021-31608763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr13:35760957-35760233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr13:47357190-47357898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
147-835
               

               
Cow position:
               
chr13:23266416-23267155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
148-436
               

               
Cow position:
               
chr13:50680935-50680623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
148-453
               

               
Cow position:
               
chr13:34038143-34038480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
148-458
               

               
Cow position:
               
chr13:60219507-60219179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 283
               

               
Conread position:
               
148-594
               

               
Cow position:
               
chr13:32166742-32166272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
148-834
               

               
Cow position:
               
chr13:32733775-32734510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 603
               

               
Conread position:
               
149-467
               

               
Cow position:
               
chr13:19638853-19638504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 180
               

               
Conread position:
               
150-381
               

               
Cow position:
               
chr13:26098722-26098972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
150-522
               

               
Cow position:
               
chr13:48627950-48627558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
150-824
               

               
Cow position:
               
chr13:11795291-11796013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 311
               

               
Conread position:
               
150-834
               

               
Cow position:
               
chr13:21402215-21401522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
150-834
               

               
Cow position:
               
chr13:44323558-44324287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
153-548
               

               
Cow position:
               
chr13:13313000-13312568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
153-786
               

               
Cow position:
               
chr13:57027638-57026982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
73, 272
               

               
Conread position:
               
154-834
               

               
Cow position:
               
chr13:18945121-18945841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 492
               

               
Conread position:
               
156-364
               

               
Cow position:
               
chr13:12404076-12403844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
156-825
               

               
Cow position:
               
chr13:16248538-16249253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 593
               

               
Conread position:
               
157-358
               

               
Cow position:
               
chr13:19565302-19565525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
157-823
               

               
Cow position:
               
chr13:20571315-20572024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
158-341
               

               
Cow position:
               
chr13:30694607-30694803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
158-367
               

               
Cow position:
               
chr13:12389973-12390204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr13:15538581-15538827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr13:20472854-20473100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr13:36673072-36672830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr13:40300342-40300588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-439
               

               
Cow position:
               
chr13:14590108-14590421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-446
               

               
Cow position:
               
chr13:55573854-55574172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 303
               

               
Conread position:
               
158-448
               

               
Cow position:
               
chr13:6869708-6869391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr13:4615411-4615089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 159
               

               
Conread position:
               
158-455
               

               
Cow position:
               
chr13:47023294-47023623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-456
               

               
Cow position:
               
chr13:43594235-43593904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
158-463
               

               
Cow position:
               
chr13:25825586-25825919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 161
               

               
Conread position:
               
158-480
               

               
Cow position:
               
chr13:34941073-34940731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
66, 333
               

               
Conread position:
               
158-509
               

               
Cow position:
               
chr13:46736782-46737153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
158-522
               

               
Cow position:
               
chr13:6343287-6342889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
158-528
               

               
Cow position:
               
chr13:7870159-7870562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
64, 341
               

               
Conread position:
               
158-535
               

               
Cow position:
               
chr13:43892226-43891816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-548
               

               
Cow position:
               
chr13:21107722-21108127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 164
               

               
Conread position:
               
158-580
               

               
Cow position:
               
chr13:35540806-35540345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 326
               

               
Conread position:
               
158-580
               

               
Cow position:
               
chr13:51298083-51298549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-631
               

               
Cow position:
               
chr13:38897706-38897198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
158-632
               

               
Cow position:
               
chr13:12618508-12618007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
158-644
               

               
Cow position:
               
chr13:38013261-38013779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
158-720
               

               
Cow position:
               
chr13:2725402-2726020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 592
               

               
Conread position:
               
158-744
               

               
Cow position:
               
chr13:8782291-8781674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
158-744
               

               
Cow position:
               
chr13:46056347-46055709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 560
               

               
Conread position:
               
158-771
               

               
Cow position:
               
chr13:13126324-13126968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
158-797
               

               
Cow position:
               
chr13:3656949-3657637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 591
               

               
Conread position:
               
158-808
               

               
Cow position:
               
chr13:25882633-25881944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
68, 375
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:560983-561708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 593
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:3021080-3021809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:11390663-11389934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:13332542-13333278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 596
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:18121466-18122194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 594
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:24931415-24932114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 381
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:28700223-28699498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:31990273-31989553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:32081281-32080553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 276
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:33522551-33523278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 591
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:41337278-41337993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 251
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:49977075-49976346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr13:58313737-58313008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 595
               

               
Conread position:
               
159-410
               

               
Cow position:
               
chr13:51332480-51332204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
160-323
               

               
Cow position:
               
chr13:10859351-10859188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 71
               

               
Conread position:
               
160-387
               

               
Cow position:
               
chr13:52077232-52076988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr13:19108536-19108780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
160-407
               

               
Cow position:
               
chr13:6616151-6615880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
160-410
               

               
Cow position:
               
chr13:33500305-33500578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 157
               

               
Conread position:
               
160-480
               

               
Cow position:
               
chr13:14716758-14716411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
62, 319
               

               
Conread position:
               
160-543
               

               
Cow position:
               
chr13:11822546-11822955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
160-549
               

               
Cow position:
               
chr13:52251300-52250894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
160-640
               

               
Cow position:
               
chr13:24702997-24703517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
160-644
               

               
Cow position:
               
chr13:11571277-11571797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
160-685
               

               
Cow position:
               
chr13:6602058-6601506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
160-685
               

               
Cow position:
               
chr13:24109684-24110235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 199
               

               
Conread position:
               
160-765
               

               
Cow position:
               
chr13:34345705-34345049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 557
               

               
Conread position:
               
160-793
               

               
Cow position:
               
chr13:32773953-32774628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 376
               

               
Conread position:
               
160-804
               

               
Cow position:
               
chr13:30034943-30035604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 141
               

               
Conread position:
               
160-805
               

               
Cow position:
               
chr13:681454-680756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 593
               

               
Conread position:
               
160-807
               

               
Cow position:
               
chr13:38599070-38599743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 230
               

               
Conread position:
               
160-807
               

               
Cow position:
               
chr13:46463018-46462355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
160-814
               

               
Cow position:
               
chr13:1882112-1882810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr13:14552249-14552944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
42, 191
               

               
Conread position:
               
161-522
               

               
Cow position:
               
chr13:15446635-15446998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
161-735
               

               
Cow position:
               
chr13:19102275-19102898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 582
               

               
Conread position:
               
161-778
               

               
Cow position:
               
chr13:17252569-17253210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
162-410
               

               
Cow position:
               
chr13:30306815-30306541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
60, 180
               

               
Conread position:
               
163-834
               

               
Cow position:
               
chr13:21905512-21906238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 582
               

               
Conread position:
               
164-480
               

               
Cow position:
               
chr13:32817287-32817629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
164-523
               

               
Cow position:
               
chr13:54864343-54863959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 271
               

               
Conread position:
               
164-834
               

               
Cow position:
               
chr13:26822740-26823427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
165-480
               

               
Cow position:
               
chr13:42201538-42201880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
165-824
               

               
Cow position:
               
chr13:5229576-5230280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 335
               

               
Conread position:
               
165-825
               

               
Cow position:
               
chr13:16807984-16807282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
167-479
               

               
Cow position:
               
chr13:12572048-12572391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
169-382
               

               
Cow position:
               
chr13:12991214-12991449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
170-804
               

               
Cow position:
               
chr13:34994346-34993685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 265
               

               
Conread position:
               
175-453
               

               
Cow position:
               
chr13:3786772-3786462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
175-645
               

               
Cow position:
               
chr13:60465626-60466144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
178-819
               

               
Cow position:
               
chr13:9301543-9300862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 266
               

               
Conread position:
               
180-462
               

               
Cow position:
               
chr13:45072690-45072392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
180-515
               

               
Cow position:
               
chr13:28449310-28449679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
189-382
               

               
Cow position:
               
chr13:35686577-35686362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
189-410
               

               
Cow position:
               
chr13:19322133-19322368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
189-452
               

               
Cow position:
               
chr13:49195322-49195028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
189-522
               

               
Cow position:
               
chr13:30241938-30241572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 312
               

               
Conread position:
               
189-528
               

               
Cow position:
               
chr13:16344779-16345144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
36, 345
               

               
Conread position:
               
189-849
               

               
Cow position:
               
chr13:31510515-31509809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 347
               

               
Conread position:
               
208-469
               

               
Cow position:
               
chr13:47313348-47313636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
209-580
               

               
Cow position:
               
chr13:1461187-1461593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 260
               

               
Conread position:
               
209-764
               

               
Cow position:
               
chr13:27540443-27539876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 310
               

               
Conread position:
               
214-693
               

               
Cow position:
               
chr13:42088142-42088642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
22, 208
               

               
Conread position:
               
221-470
               

               
Cow position:
               
chr13:15459025-15458774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
221-644
               

               
Cow position:
               
chr13:33907430-33907882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 270
               

               
Conread position:
               
221-782
               

               
Cow position:
               
chr13:6718832-6719436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 277
               

               
Conread position:
               
221-815
               

               
Cow position:
               
chr13:26986584-26987215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
232-519
               

               
Cow position:
               
chr13:47189332-47189027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
234-772
               

               
Cow position:
               
chr13:2804964-2805543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
235-474
               

               
Cow position:
               
chr13:24059645-24059385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 247
               

               
Conread position:
               
240-823
               

               
Cow position:
               
chr13:9570702-9571316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 354
               

               
Conread position:
               
243-807
               

               
Cow position:
               
chr13:47570383-47569792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 283
               

               
Conread position:
               
243-823
               

               
Cow position:
               
chr13:22780679-22781291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 491
               

               
Conread position:
               
243-834
               

               
Cow position:
               
chr13:11254358-11254985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 172
               

               
Conread position:
               
260-811
               

               
Cow position:
               
chr13:60920502-60921054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
261-472
               

               
Cow position:
               
chr13:17456382-17456159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
267-815
               

               
Cow position:
               
chr13:34928435-34927863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
269-808
               

               
Cow position:
               
chr13:21764614-21764057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
269-835
               

               
Cow position:
               
chr13:19843738-19843159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
273-826
               

               
Cow position:
               
chr13:60426301-60425718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
277-745
               

               
Cow position:
               
chr13:25694739-25694263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 111
               

               
Conread position:
               
277-834
               

               
Cow position:
               
chr13:34376262-34376850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
281-834
               

               
Cow position:
               
chr13:30652021-30652612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 203
               

               
Conread position:
               
285-558
               

               
Cow position:
               
chr13:15257148-15256849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
288-610
               

               
Cow position:
               
chr13:52085043-52085392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
53, 222
               

               
Conread position:
               
289-623
               

               
Cow position:
               
chr13:19393868-19394226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 232
               

               
Conread position:
               
290-579
               

               
Cow position:
               
chr13:52859990-52860295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
290-806
               

               
Cow position:
               
chr13:54238193-54238740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
290-825
               

               
Cow position:
               
chr13:2137923-2138493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 445
               

               
Conread position:
               
291-581
               

               
Cow position:
               
chr13:48945691-48945997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
291-795
               

               
Cow position:
               
chr13:47574317-47574842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 183
               

               
Conread position:
               
292-825
               

               
Cow position:
               
chr13:22276040-22275486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
293-788
               

               
Cow position:
               
chr13:45933999-45933473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 438
               

               
Conread position:
               
302-726
               

               
Cow position:
               
chr13:58740812-58740361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 215
               

               
Conread position:
               
302-825
               

               
Cow position:
               
chr13:22715132-22714581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
302-834
               

               
Cow position:
               
chr13:32955221-32955784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 430
               

               
Conread position:
               
302-834
               

               
Cow position:
               
chr13:32982162-32982725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 430
               

               
Conread position:
               
308-520
               

               
Cow position:
               
chr13:30431353-30431144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
310-814
               

               
Cow position:
               
chr13:58718782-58718255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
311-835
               

               
Cow position:
               
chr13:7609379-7608822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 157
               

               
Conread position:
               
316-635
               

               
Cow position:
               
chr13:17277380-17277039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
317-802
               

               
Cow position:
               
chr13:15429716-15430207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
341-808
               

               
Cow position:
               
chr13:25891559-25891065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
342-718
               

               
Cow position:
               
chr13:18097423-18097830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 385
               

               
Conread position:
               
342-834
               

               
Cow position:
               
chr13:3001152-3001674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
345-823
               

               
Cow position:
               
chr13:18761065-18761575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 384
               

               
Conread position:
               
345-832
               

               
Cow position:
               
chr13:10733174-10732665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
347-801
               

               
Cow position:
               
chr13:34332880-34332403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
43, 316
               

               
Conread position:
               
348-834
               

               
Cow position:
               
chr13:17318185-17318697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
351-804
               

               
Cow position:
               
chr13:1442581-1442101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
352-818
               

               
Cow position:
               
chr13:14522497-14522972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
352-825
               

               
Cow position:
               
chr13:31730382-31730886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 379
               

               
Conread position:
               
353-736
               

               
Cow position:
               
chr13:504522-504108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
32, 372
               

               
Conread position:
               
361-644
               

               
Cow position:
               
chr13:46427900-46427592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
364-823
               

               
Cow position:
               
chr13:29791497-29791034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
364-834
               

               
Cow position:
               
chr13:19240069-19239584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 229
               

               
Conread position:
               
368-833
               

               
Cow position:
               
chr13:53574906-53575392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
374-796
               

               
Cow position:
               
chr13:19450520-19450067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
75, 335
               

               
Conread position:
               
386-825
               

               
Cow position:
               
chr13:32549903-32549445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
386-834
               

               
Cow position:
               
chr13:19566871-19566396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
412-754
               

               
Cow position:
               
chr13:47577713-47577350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 305
               

               
Conread position:
               
414-551
               

               
Cow position:
               
chr13:42250374-42250519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
414-782
               

               
Cow position:
               
chr13:52459042-52459430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
46, 104
               

               
Conread position:
               
421-825
               

               
Cow position:
               
chr13:32253240-32253666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 301
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr13:14411060-14411495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 301
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr13:28526200-28526633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr13:34321870-34322289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
58, 159
               

               
Conread position:
               
426-815
               

               
Cow position:
               
chr13:43120444-43120853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 295
               

               
Conread position:
               
427-834
               

               
Cow position:
               
chr13:8068098-8068526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 294
               

               
Conread position:
               
428-834
               

               
Cow position:
               
chr13:6441942-6441522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 277
               

               
Conread position:
               
430-736
               

               
Cow position:
               
chr13:47006795-47006474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 197
               

               
Conread position:
               
431-834
               

               
Cow position:
               
chr13:30306286-30305862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 292
               

               
Conread position:
               
432-645
               

               
Cow position:
               
chr13:36351928-36351700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 189
               

               
Conread position:
               
432-817
               

               
Cow position:
               
chr13:26080905-26080496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 81
               

               
Conread position:
               
436-804
               

               
Cow position:
               
chr13:54067984-54067612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
439-834
               

               
Cow position:
               
chr13:12565082-12565475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
440-828
               

               
Cow position:
               
chr13:61978078-61977681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 155
               

               
Conread position:
               
445-834
               

               
Cow position:
               
chr13:20484250-20483840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
446-834
               

               
Cow position:
               
chr13:6360949-6360543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 272
               

               
Conread position:
               
471-825
               

               
Cow position:
               
chr13:5261797-5261441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
474-782
               

               
Cow position:
               
chr13:24237583-24237260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 238
               

               
Conread position:
               
489-834
               

               
Cow position:
               
chr13:30794677-30795036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 221
               

               
Conread position:
               
491-765
               

               
Cow position:
               
chr13:11053276-11053566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
34, 190
               

               
Conread position:
               
491-778
               

               
Cow position:
               
chr13:17921475-17921786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
491-825
               

               
Cow position:
               
chr13:143081-143434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
491-829
               

               
Cow position:
               
chr13:34039303-34039660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 230
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr13:3651406-3651767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 229
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr13:36347091-36347446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
505-834
               

               
Cow position:
               
chr13:19638166-19637829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
506-823
               

               
Cow position:
               
chr13:11169142-11169456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
508-807
               

               
Cow position:
               
chr13:14182944-14183247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
508-825
               

               
Cow position:
               
chr13:3480884-3481199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
514-762
               

               
Cow position:
               
chr13:46598291-46598546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
514-831
               

               
Cow position:
               
chr13:47537107-47536794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
521-819
               

               
Cow position:
               
chr13:41567182-41567491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
521-825
               

               
Cow position:
               
chr13:34940659-34940355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
530-814
               

               
Cow position:
               
chr13:512794-513075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
530-834
               

               
Cow position:
               
chr13:35686364-35686055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
542-825
               

               
Cow position:
               
chr13:19424604-19424314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
545-793
               

               
Cow position:
               
chr13:42250556-42250811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
545-821
               

               
Cow position:
               
chr13:54106915-54107200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
569-796
               

               
Cow position:
               
chr13:9112721-9112489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
569-807
               

               
Cow position:
               
chr13:28132423-28132180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
569-822
               

               
Cow position:
               
chr13:1142943-1142691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 117
               

               
Conread position:
               
569-834
               

               
Cow position:
               
chr13:14737838-14737567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 132
               

               
Conread position:
               
569-834
               

               
Cow position:
               
chr13:30241491-30241226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
570-811
               

               
Cow position:
               
chr13:59403231-59403470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 132
               

               
Conread position:
               
570-834
               

               
Cow position:
               
chr13:47728854-47729122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
571-815
               

               
Cow position:
               
chr13:9536909-9537158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
77, 126
               

               
Conread position:
               
591-822
               

               
Cow position:
               
chr13:31725754-31725988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
591-825
               

               
Cow position:
               
chr13:30243146-30242907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
591-834
               

               
Cow position:
               
chr13:36672578-36672333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
605-835
               

               
Cow position:
               
chr13:46489031-46489266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
609-834
               

               
Cow position:
               
chr13:35540078-35539848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
609-834
               

               
Cow position:
               
chr13:43160605-43160376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
609-834
               

               
Cow position:
               
chr13:43592194-43591963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
610-834
               

               
Cow position:
               
chr13:15278907-15279133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
616-825
               

               
Cow position:
               
chr13:60697907-60698120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
645-825
               

               
Cow position:
               
chr13:49748172-49747993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
645-834
               

               
Cow position:
               
chr13:30430835-30431021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
654-824
               

               
Cow position:
               
chr13:33929286-33929455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
657-803
               

               
Cow position:
               
chr13:15560440-15560296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
664-804
               

               
Cow position:
               
chr13:33501351-33501490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
672-834
               

               
Cow position:
               
chr13:2581268-2581429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
698-834
               

               
Cow position:
               
chr13:51006211-51006347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
700-834
               

               
Cow position:
               
chr13:644162-644296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
704-834
               

               
Cow position:
               
chr13:46598783-46598914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
719-834
               

               
Cow position:
               
chr13:32922483-32922598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
729-832
               

               
Cow position:
               
chr13:19394249-19394352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.