• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8021O16.3
        

               
Conread position:
               
1-728
               

               
Cow position:
               
chr16:1957631-1958415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
62-825
               

               
Cow position:
               
chr16:47404418-47403595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
73-221
               

               
Cow position:
               
chr16:49449845-49449995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
73-295
               

               
Cow position:
               
chr16:29379760-29379520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
73-337
               

               
Cow position:
               
chr16:25483864-25483570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr16:23877507-23877159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr16:34021819-34022168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-446
               

               
Cow position:
               
chr16:26671104-26671508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-453
               

               
Cow position:
               
chr16:2962824-2963253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
73-453
               

               
Cow position:
               
chr16:19062867-19062440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
73-453
               

               
Cow position:
               
chr16:49094071-49094493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-456
               

               
Cow position:
               
chr16:15370008-15369591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
73-520
               

               
Cow position:
               
chr16:54703501-54703032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
73-522
               

               
Cow position:
               
chr16:54231320-54231808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
73-602
               

               
Cow position:
               
chr16:24987470-24988065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
73-720
               

               
Cow position:
               
chr16:22798680-22799388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
73-782
               

               
Cow position:
               
chr16:23248929-23249715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
790
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
73-804
               

               
Cow position:
               
chr16:16540430-16539649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
73-808
               

               
Cow position:
               
chr16:5895463-5894670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
73-822
               

               
Cow position:
               
chr16:4757041-4756239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
811
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
73-825
               

               
Cow position:
               
chr16:14100872-14100065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
73-827
               

               
Cow position:
               
chr16:55151356-55150564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr16:15979345-15980175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
834
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr16:47773288-47772464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
834
               

               
Alignm identity:
               
610
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr16:52527261-52526434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
74-695
               

               
Cow position:
               
chr16:25043079-25042395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
74-727
               

               
Cow position:
               
chr16:600444-599738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
74-834
               

               
Cow position:
               
chr16:12160261-12161077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
74-835
               

               
Cow position:
               
chr16:4972525-4973321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
810
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
75-337
               

               
Cow position:
               
chr16:15408376-15408658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
99-832
               

               
Cow position:
               
chr16:31426047-31425258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
582
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
109-719
               

               
Cow position:
               
chr16:52855883-52856525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
122-834
               

               
Cow position:
               
chr16:41034271-41033503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 634
               

               
Conread position:
               
123-736
               

               
Cow position:
               
chr16:5416308-5416967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
123-834
               

               
Cow position:
               
chr16:192970-193733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 417
               

               
Conread position:
               
124-834
               

               
Cow position:
               
chr16:44101-43351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
128-452
               

               
Cow position:
               
chr16:7673413-7673751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
10, 221
               

               
Conread position:
               
137-440
               

               
Cow position:
               
chr16:20475654-20475320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
139-410
               

               
Cow position:
               
chr16:49169938-49170224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
10, 174
               

               
Conread position:
               
139-453
               

               
Cow position:
               
chr16:22320337-22320685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 165
               

               
Conread position:
               
139-466
               

               
Cow position:
               
chr16:23403762-23403406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
142-742
               

               
Cow position:
               
chr16:5435771-5435119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
142-819
               

               
Cow position:
               
chr16:2232781-2233503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
142-834
               

               
Cow position:
               
chr16:41483-40739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
142-834
               

               
Cow position:
               
chr16:3332835-3332114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
142-834
               

               
Cow position:
               
chr16:4461382-4462109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
143-284
               

               
Cow position:
               
chr16:30516482-30516632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
143-323
               

               
Cow position:
               
chr16:31585558-31585754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-327
               

               
Cow position:
               
chr16:3597089-3597284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-337
               

               
Cow position:
               
chr16:16596680-16596469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-337
               

               
Cow position:
               
chr16:20234686-20234893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
143-337
               

               
Cow position:
               
chr16:49188326-49188526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-337
               

               
Cow position:
               
chr16:51042568-51042773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr16:24752982-24753242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr16:27537959-27537699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr16:47518254-47517989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
143-389
               

               
Cow position:
               
chr16:22810629-22810887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-398
               

               
Cow position:
               
chr16:48956036-48955771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
143-399
               

               
Cow position:
               
chr16:5756880-5756609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-407
               

               
Cow position:
               
chr16:10866701-10866412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
143-449
               

               
Cow position:
               
chr16:19409410-19409746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-452
               

               
Cow position:
               
chr16:23059146-23059482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr16:16942661-16942320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr16:49096909-49096568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr16:52952295-52952636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-459
               

               
Cow position:
               
chr16:42079424-42079751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-461
               

               
Cow position:
               
chr16:44689211-44689547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
143-465
               

               
Cow position:
               
chr16:48494974-48495325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-467
               

               
Cow position:
               
chr16:32118522-32118169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-467
               

               
Cow position:
               
chr16:44450888-44450532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-469
               

               
Cow position:
               
chr16:13989228-13988879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
143-517
               

               
Cow position:
               
chr16:48341263-48341669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
143-519
               

               
Cow position:
               
chr16:46385603-46386003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-522
               

               
Cow position:
               
chr16:5350563-5350975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-522
               

               
Cow position:
               
chr16:50190177-50190581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
143-537
               

               
Cow position:
               
chr16:29538868-29539293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-540
               

               
Cow position:
               
chr16:53509576-53510013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
143-548
               

               
Cow position:
               
chr16:7136905-7137338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr16:14029211-14029658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
143-580
               

               
Cow position:
               
chr16:5488816-5488336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-631
               

               
Cow position:
               
chr16:47017823-47018338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
143-677
               

               
Cow position:
               
chr16:49126766-49127327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
143-685
               

               
Cow position:
               
chr16:25075538-25074943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-693
               

               
Cow position:
               
chr16:12485355-12485958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-721
               

               
Cow position:
               
chr16:24615130-24615750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-734
               

               
Cow position:
               
chr16:7303702-7303058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-748
               

               
Cow position:
               
chr16:20278785-20278128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-766
               

               
Cow position:
               
chr16:15349217-15349877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
143-789
               

               
Cow position:
               
chr16:49742584-49743261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-796
               

               
Cow position:
               
chr16:29158545-29157882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
143-804
               

               
Cow position:
               
chr16:56913296-56913997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr16:20204925-20204212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr16:23986258-23985523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr16:49230364-49231069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 18
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr16:49253323-49254027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
143-831
               

               
Cow position:
               
chr16:29036804-29036099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:417838-417096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:840215-839486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:1734681-1733944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:3148096-3148828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:4427035-4426293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:10441183-10440441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:14662178-14662906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:26666655-26665906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:28193356-28194098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:40293225-40293968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:43894318-43895060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr16:51087727-51086985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
144-329
               

               
Cow position:
               
chr16:48933004-48933201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
144-357
               

               
Cow position:
               
chr16:45158026-45158263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
144-367
               

               
Cow position:
               
chr16:51043045-51042805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
144-454
               

               
Cow position:
               
chr16:54228339-54228685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
144-551
               

               
Cow position:
               
chr16:42733347-42733785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
144-580
               

               
Cow position:
               
chr16:49142126-49142608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
144-765
               

               
Cow position:
               
chr16:38177704-38177067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
144-823
               

               
Cow position:
               
chr16:13043172-13042456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
144-832
               

               
Cow position:
               
chr16:25893447-25892734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
144-834
               

               
Cow position:
               
chr16:55579581-55578874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
145-337
               

               
Cow position:
               
chr16:23472165-23471958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
145-369
               

               
Cow position:
               
chr16:25254406-25254165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
145-380
               

               
Cow position:
               
chr16:40913557-40913305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
145-410
               

               
Cow position:
               
chr16:24229179-24228893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
145-480
               

               
Cow position:
               
chr16:8367784-8368149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
145-644
               

               
Cow position:
               
chr16:702192-701658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
145-645
               

               
Cow position:
               
chr16:684662-685191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 467
               

               
Conread position:
               
145-645
               

               
Cow position:
               
chr16:14040368-14039822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
145-675
               

               
Cow position:
               
chr16:44704558-44703983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
145-824
               

               
Cow position:
               
chr16:28473009-28473711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
8, 208
               

               
Conread position:
               
145-825
               

               
Cow position:
               
chr16:12535025-12535727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
145-825
               

               
Cow position:
               
chr16:13421983-13422708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
145-834
               

               
Cow position:
               
chr16:37477918-37478658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
145-834
               

               
Cow position:
               
chr16:39616158-39615441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
145-834
               

               
Cow position:
               
chr16:43562451-43563190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 290
               

               
Conread position:
               
146-337
               

               
Cow position:
               
chr16:10202990-10203196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
146-363
               

               
Cow position:
               
chr16:18678611-18678381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
146-410
               

               
Cow position:
               
chr16:825411-825125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
146-452
               

               
Cow position:
               
chr16:6389712-6390051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
146-522
               

               
Cow position:
               
chr16:7504375-7503972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
146-824
               

               
Cow position:
               
chr16:16032826-16032104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
146-824
               

               
Cow position:
               
chr16:45609352-45608627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 355
               

               
Conread position:
               
146-834
               

               
Cow position:
               
chr16:3769064-3769808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 612
               

               
Conread position:
               
147-382
               

               
Cow position:
               
chr16:20967942-20968202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-382
               

               
Cow position:
               
chr16:34809312-34809054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-410
               

               
Cow position:
               
chr16:18949018-18948740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
147-453
               

               
Cow position:
               
chr16:51641190-51640853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-454
               

               
Cow position:
               
chr16:28864275-28864606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 173
               

               
Conread position:
               
147-467
               

               
Cow position:
               
chr16:4079025-4079368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
147-480
               

               
Cow position:
               
chr16:15179609-15179268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
147-528
               

               
Cow position:
               
chr16:29512713-29512303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
147-571
               

               
Cow position:
               
chr16:27013337-27012876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
147-580
               

               
Cow position:
               
chr16:29050587-29050109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
147-580
               

               
Cow position:
               
chr16:41834808-41834346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
147-611
               

               
Cow position:
               
chr16:15485732-15485222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 330
               

               
Conread position:
               
147-624
               

               
Cow position:
               
chr16:7457044-7457565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
147-635
               

               
Cow position:
               
chr16:54322467-54323012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 375
               

               
Conread position:
               
147-654
               

               
Cow position:
               
chr16:18745094-18745642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
147-714
               

               
Cow position:
               
chr16:1563444-1564063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 572
               

               
Conread position:
               
147-726
               

               
Cow position:
               
chr16:37670566-37671185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 264
               

               
Conread position:
               
147-796
               

               
Cow position:
               
chr16:39033410-39034084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 410
               

               
Conread position:
               
147-815
               

               
Cow position:
               
chr16:23533057-23533776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 339
               

               
Conread position:
               
147-825
               

               
Cow position:
               
chr16:15188001-15187279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 424
               

               
Conread position:
               
147-825
               

               
Cow position:
               
chr16:15570708-15569982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 185
               

               
Conread position:
               
147-826
               

               
Cow position:
               
chr16:8813162-8813891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 329
               

               
Conread position:
               
147-829
               

               
Cow position:
               
chr16:25444819-25444086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 607
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr16:2724281-2725020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 595
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr16:11632901-11633641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 609
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr16:17142342-17141610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 594
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr16:27730439-27731179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr16:28206168-28206909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 573
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr16:46101676-46102414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 362
               

               
Conread position:
               
148-432
               

               
Cow position:
               
chr16:44972801-44973122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
148-795
               

               
Cow position:
               
chr16:25174176-25173492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 327
               

               
Conread position:
               
148-801
               

               
Cow position:
               
chr16:26500572-26499918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
148-825
               

               
Cow position:
               
chr16:15495393-15494669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
148-829
               

               
Cow position:
               
chr16:25454536-25455253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
150-528
               

               
Cow position:
               
chr16:44676291-44675879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
151-723
               

               
Cow position:
               
chr16:41576155-41575568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 8
               

               
Conread position:
               
151-793
               

               
Cow position:
               
chr16:16096138-16095455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 587
               

               
Conread position:
               
155-479
               

               
Cow position:
               
chr16:48010478-48010815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 157
               

               
Conread position:
               
155-760
               

               
Cow position:
               
chr16:5844849-5844195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
65, 360
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr16:2426172-2426418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr16:26389413-26389175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr16:29107213-29107459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr16:39788073-39788319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-409
               

               
Cow position:
               
chr16:43813483-43813217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 228
               

               
Conread position:
               
158-410
               

               
Cow position:
               
chr16:15813013-15812735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-431
               

               
Cow position:
               
chr16:14758118-14757814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
158-442
               

               
Cow position:
               
chr16:3012045-3011733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-442
               

               
Cow position:
               
chr16:14570506-14570207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 94
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr16:20502962-20502639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr16:26658896-26658569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr16:35342570-35342897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
158-456
               

               
Cow position:
               
chr16:42745553-42745877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 277
               

               
Conread position:
               
158-482
               

               
Cow position:
               
chr16:8883864-8883511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
64, 337
               

               
Conread position:
               
158-513
               

               
Cow position:
               
chr16:23772744-23773133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-520
               

               
Cow position:
               
chr16:23737584-23737228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
158-543
               

               
Cow position:
               
chr16:24147571-24147165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
158-558
               

               
Cow position:
               
chr16:49515850-49516289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 388
               

               
Conread position:
               
158-571
               

               
Cow position:
               
chr16:7385696-7385239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 329
               

               
Conread position:
               
158-602
               

               
Cow position:
               
chr16:2960610-2960118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-602
               

               
Cow position:
               
chr16:18212264-18212756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-637
               

               
Cow position:
               
chr16:5666030-5665502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-645
               

               
Cow position:
               
chr16:25880246-25879712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
158-658
               

               
Cow position:
               
chr16:49780019-49780568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-677
               

               
Cow position:
               
chr16:13721657-13722231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-714
               

               
Cow position:
               
chr16:15904290-15904882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 302
               

               
Conread position:
               
158-728
               

               
Cow position:
               
chr16:45464989-45465609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 586
               

               
Conread position:
               
158-734
               

               
Cow position:
               
chr16:18650653-18651280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 382
               

               
Conread position:
               
158-755
               

               
Cow position:
               
chr16:26627683-26627035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 589
               

               
Conread position:
               
158-767
               

               
Cow position:
               
chr16:50712508-50713170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 591
               

               
Conread position:
               
158-782
               

               
Cow position:
               
chr16:6677648-6676974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 592
               

               
Conread position:
               
158-800
               

               
Cow position:
               
chr16:5525169-5525868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
158-815
               

               
Cow position:
               
chr16:20634313-20634993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
158-819
               

               
Cow position:
               
chr16:4342987-4343685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
158-819
               

               
Cow position:
               
chr16:18975799-18975086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 499
               

               
Conread position:
               
158-824
               

               
Cow position:
               
chr16:41036113-41036812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr16:34483078-34482374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr16:42211427-42210707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr16:46555353-46554633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr16:12651851-12651130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 199
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr16:15312212-15311485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 593
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr16:16149817-16150545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 594
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr16:19081977-19081254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 241
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr16:24209467-24210195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 344
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr16:24407843-24407112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 337
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr16:30052866-30052151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
159-409
               

               
Cow position:
               
chr16:14722342-14722609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
159-578
               

               
Cow position:
               
chr16:25169155-25168704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 161
               

               
Conread position:
               
159-738
               

               
Cow position:
               
chr16:45534383-45533766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
159-744
               

               
Cow position:
               
chr16:40879522-40878884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 588
               

               
Conread position:
               
160-387
               

               
Cow position:
               
chr16:3632993-3632746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
160-410
               

               
Cow position:
               
chr16:3027340-3027084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
122, 52
               

               
Conread position:
               
160-464
               

               
Cow position:
               
chr16:7566994-7566660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 6
               

               
Conread position:
               
160-788
               

               
Cow position:
               
chr16:10372507-10373186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 310
               

               
Conread position:
               
160-794
               

               
Cow position:
               
chr16:28468194-28468881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 591
               

               
Conread position:
               
160-801
               

               
Cow position:
               
chr16:24240471-24241165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 598
               

               
Conread position:
               
160-806
               

               
Cow position:
               
chr16:45654646-45655358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 531
               

               
Conread position:
               
160-809
               

               
Cow position:
               
chr16:19722854-19722186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
160-818
               

               
Cow position:
               
chr16:41163847-41164553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
160-825
               

               
Cow position:
               
chr16:14441294-14440581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
160-825
               

               
Cow position:
               
chr16:21018487-21017770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
160-832
               

               
Cow position:
               
chr16:43844041-43844752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 245
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr16:2480230-2480939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr16:7467537-7466816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 437
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr16:27592895-27593620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 591
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr16:28022141-28022850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 209
               

               
Conread position:
               
161-627
               

               
Cow position:
               
chr16:2305288-2304774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
161-704
               

               
Cow position:
               
chr16:15805230-15804638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
161-766
               

               
Cow position:
               
chr16:48411572-48410904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
161-782
               

               
Cow position:
               
chr16:41623783-41624420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
161-792
               

               
Cow position:
               
chr16:47367897-47367242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
161-792
               

               
Cow position:
               
chr16:53225408-53226073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
163-834
               

               
Cow position:
               
chr16:25263520-25262818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 147
               

               
Conread position:
               
164-522
               

               
Cow position:
               
chr16:23810440-23810054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
165-435
               

               
Cow position:
               
chr16:6379715-6380015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
165-693
               

               
Cow position:
               
chr16:25157483-25158051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 334
               

               
Conread position:
               
167-825
               

               
Cow position:
               
chr16:25344900-25344189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 588
               

               
Conread position:
               
168-398
               

               
Cow position:
               
chr16:23872255-23872498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
168-512
               

               
Cow position:
               
chr16:9786232-9785858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
170-808
               

               
Cow position:
               
chr16:42073975-42074664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 553
               

               
Conread position:
               
171-522
               

               
Cow position:
               
chr16:23563359-23562987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
171-522
               

               
Cow position:
               
chr16:49577892-49577524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 262
               

               
Conread position:
               
172-834
               

               
Cow position:
               
chr16:11054887-11054198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
173-787
               

               
Cow position:
               
chr16:19671364-19671987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
173-825
               

               
Cow position:
               
chr16:26654572-26653880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 301
               

               
Conread position:
               
176-634
               

               
Cow position:
               
chr16:28267805-28268308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
187-834
               

               
Cow position:
               
chr16:26990039-26990737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
188-834
               

               
Cow position:
               
chr16:2407991-2408692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 165
               

               
Conread position:
               
189-480
               

               
Cow position:
               
chr16:7541380-7541063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 270
               

               
Conread position:
               
189-834
               

               
Cow position:
               
chr16:14351783-14352478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 564
               

               
Conread position:
               
190-571
               

               
Cow position:
               
chr16:18426290-18425877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
201-851
               

               
Cow position:
               
chr16:10859446-10860129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
206-410
               

               
Cow position:
               
chr16:42254446-42254661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
208-746
               

               
Cow position:
               
chr16:37445831-37446409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 223
               

               
Conread position:
               
220-834
               

               
Cow position:
               
chr16:37442684-37443325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
221-557
               

               
Cow position:
               
chr16:25935603-25935241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 348
               

               
Conread position:
               
221-644
               

               
Cow position:
               
chr16:12737141-12736676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 420
               

               
Conread position:
               
221-834
               

               
Cow position:
               
chr16:23065859-23065214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
222-834
               

               
Cow position:
               
chr16:8871582-8872228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 286
               

               
Conread position:
               
227-834
               

               
Cow position:
               
chr16:237329-236699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 191
               

               
Conread position:
               
227-834
               

               
Cow position:
               
chr16:7673618-7674258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
228-825
               

               
Cow position:
               
chr16:18694115-18694757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
235-480
               

               
Cow position:
               
chr16:39457231-39456966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
235-819
               

               
Cow position:
               
chr16:44049080-44049706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 484
               

               
Conread position:
               
235-823
               

               
Cow position:
               
chr16:25964743-25964127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 190
               

               
Conread position:
               
235-834
               

               
Cow position:
               
chr16:20378289-20377664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 254
               

               
Conread position:
               
243-835
               

               
Cow position:
               
chr16:16267084-16267695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
248-549
               

               
Cow position:
               
chr16:2224124-2224443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
248-741
               

               
Cow position:
               
chr16:37058194-37058714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
250-705
               

               
Cow position:
               
chr16:55868134-55867674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
258-834
               

               
Cow position:
               
chr16:53612614-53612007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 371
               

               
Conread position:
               
261-721
               

               
Cow position:
               
chr16:32326673-32326179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 469
               

               
Conread position:
               
262-834
               

               
Cow position:
               
chr16:45754818-45755409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 184
               

               
Conread position:
               
265-597
               

               
Cow position:
               
chr16:5833602-5833245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
266-693
               

               
Cow position:
               
chr16:8481824-8482276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 148
               

               
Conread position:
               
269-644
               

               
Cow position:
               
chr16:41804653-41805044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
270-814
               

               
Cow position:
               
chr16:55911007-55911564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
270-828
               

               
Cow position:
               
chr16:25954784-25955369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
270-834
               

               
Cow position:
               
chr16:45703993-45704586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 197
               

               
Conread position:
               
270-834
               

               
Cow position:
               
chr16:49219147-49219753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 223
               

               
Conread position:
               
271-822
               

               
Cow position:
               
chr16:43743815-43744364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
273-834
               

               
Cow position:
               
chr16:19797895-19798484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
288-548
               

               
Cow position:
               
chr16:42751926-42751653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
290-540
               

               
Cow position:
               
chr16:4367401-4367136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 228
               

               
Conread position:
               
290-763
               

               
Cow position:
               
chr16:37454706-37455204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 191
               

               
Conread position:
               
290-818
               

               
Cow position:
               
chr16:25088398-25087826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 451
               

               
Conread position:
               
290-825
               

               
Cow position:
               
chr16:7155381-7154813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
290-834
               

               
Cow position:
               
chr16:41515915-41515334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
291-528
               

               
Cow position:
               
chr16:51400781-51401021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
291-780
               

               
Cow position:
               
chr16:37053818-37053294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 444
               

               
Conread position:
               
291-825
               

               
Cow position:
               
chr16:37925205-37925762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 169
               

               
Conread position:
               
292-579
               

               
Cow position:
               
chr16:29093900-29093594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 270
               

               
Conread position:
               
292-634
               

               
Cow position:
               
chr16:23711508-23711880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
292-834
               

               
Cow position:
               
chr16:54179585-54180151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 369
               

               
Conread position:
               
293-774
               

               
Cow position:
               
chr16:340534-340044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
297-778
               

               
Cow position:
               
chr16:12244270-12244783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
304-759
               

               
Cow position:
               
chr16:3349772-3349291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 214
               

               
Conread position:
               
311-815
               

               
Cow position:
               
chr16:55591243-55591756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
311-834
               

               
Cow position:
               
chr16:41683535-41684101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
34, 417
               

               
Conread position:
               
315-815
               

               
Cow position:
               
chr16:13601888-13602411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 411
               

               
Conread position:
               
315-825
               

               
Cow position:
               
chr16:21190014-21189469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 420
               

               
Conread position:
               
318-815
               

               
Cow position:
               
chr16:23673272-23672774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
325-548
               

               
Cow position:
               
chr16:48371357-48371600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
333-788
               

               
Cow position:
               
chr16:14569465-14569942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
57, 303
               

               
Conread position:
               
335-834
               

               
Cow position:
               
chr16:39475566-39475041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
336-630
               

               
Cow position:
               
chr16:24445174-24444852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
45, 187
               

               
Conread position:
               
339-834
               

               
Cow position:
               
chr16:54287269-54286756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 231
               

               
Conread position:
               
340-547
               

               
Cow position:
               
chr16:819692-819475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
342-825
               

               
Cow position:
               
chr16:658675-658172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 130
               

               
Conread position:
               
342-829
               

               
Cow position:
               
chr16:31585977-31586488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 293
               

               
Conread position:
               
345-773
               

               
Cow position:
               
chr16:20201794-20201339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
348-796
               

               
Cow position:
               
chr16:16285741-16285277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 245
               

               
Conread position:
               
350-833
               

               
Cow position:
               
chr16:51041252-51040758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
353-645
               

               
Cow position:
               
chr16:6706001-6706319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
358-811
               

               
Cow position:
               
chr16:45550842-45550373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
368-834
               

               
Cow position:
               
chr16:28167625-28168116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
373-823
               

               
Cow position:
               
chr16:3820056-3819578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
374-768
               

               
Cow position:
               
chr16:5763526-5763115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
388-828
               

               
Cow position:
               
chr16:37486582-37487049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 340
               

               
Conread position:
               
418-766
               

               
Cow position:
               
chr16:10812688-10812333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
421-764
               

               
Cow position:
               
chr16:27710568-27710925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
421-791
               

               
Cow position:
               
chr16:49170347-49170723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 201
               

               
Conread position:
               
421-825
               

               
Cow position:
               
chr16:44127219-44127627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
8, 243
               

               
Conread position:
               
421-831
               

               
Cow position:
               
chr16:49530039-49529611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 297
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr16:15812705-15812270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 301
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr16:23875902-23876327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr16:26388531-26388963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr16:37146610-37146179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
422-815
               

               
Cow position:
               
chr16:52524926-52524520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
423-834
               

               
Cow position:
               
chr16:20643123-20642689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 201
               

               
Conread position:
               
426-834
               

               
Cow position:
               
chr16:45816486-45816908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
427-822
               

               
Cow position:
               
chr16:2394992-2394583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
427-825
               

               
Cow position:
               
chr16:53991585-53991173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
427-834
               

               
Cow position:
               
chr16:27010809-27010381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
429-832
               

               
Cow position:
               
chr16:42118371-42117959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 147
               

               
Conread position:
               
432-824
               

               
Cow position:
               
chr16:7009653-7009268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
433-834
               

               
Cow position:
               
chr16:3011462-3011041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 285
               

               
Conread position:
               
434-834
               

               
Cow position:
               
chr16:34532917-34532496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 253
               

               
Conread position:
               
440-834
               

               
Cow position:
               
chr16:42080001-42080406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
464-834
               

               
Cow position:
               
chr16:48495543-48495934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
477-815
               

               
Cow position:
               
chr16:11640493-11640149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
490-729
               

               
Cow position:
               
chr16:7022464-7022207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
491-824
               

               
Cow position:
               
chr16:19887583-19887239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr16:11006622-11006984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr16:24988153-24988515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr16:26317275-26316913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr16:54479770-54479408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
498-755
               

               
Cow position:
               
chr16:712917-712641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 221
               

               
Conread position:
               
498-834
               

               
Cow position:
               
chr16:13538867-13539222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 221
               

               
Conread position:
               
505-764
               

               
Cow position:
               
chr16:49577483-49577232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
505-825
               

               
Cow position:
               
chr16:25260663-25260336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
505-829
               

               
Cow position:
               
chr16:35039-34708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
506-825
               

               
Cow position:
               
chr16:34506239-34505911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
514-807
               

               
Cow position:
               
chr16:6945789-6945489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
521-803
               

               
Cow position:
               
chr16:27105878-27105593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
521-823
               

               
Cow position:
               
chr16:10965723-10966021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
526-777
               

               
Cow position:
               
chr16:9431552-9431811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
534-824
               

               
Cow position:
               
chr16:15410553-15410851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
537-820
               

               
Cow position:
               
chr16:819457-819186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
537-834
               

               
Cow position:
               
chr16:17111760-17111454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 172
               

               
Conread position:
               
545-825
               

               
Cow position:
               
chr16:23562938-23562656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 111
               

               
Conread position:
               
545-828
               

               
Cow position:
               
chr16:6620128-6620415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
545-830
               

               
Cow position:
               
chr16:24146512-24146236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
545-834
               

               
Cow position:
               
chr16:11745041-11744743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
546-819
               

               
Cow position:
               
chr16:46528826-46529105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 143
               

               
Conread position:
               
564-824
               

               
Cow position:
               
chr16:29685406-29685663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
569-797
               

               
Cow position:
               
chr16:42805201-42804974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
569-810
               

               
Cow position:
               
chr16:15549324-15549078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
569-834
               

               
Cow position:
               
chr16:23364441-23364709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
569-834
               

               
Cow position:
               
chr16:24621225-24621495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
579-834
               

               
Cow position:
               
chr16:25168529-25168265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
586-822
               

               
Cow position:
               
chr16:29049887-29049646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
591-804
               

               
Cow position:
               
chr16:4846214-4846430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
591-818
               

               
Cow position:
               
chr16:5488220-5487988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
591-834
               

               
Cow position:
               
chr16:54432024-54431776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
593-834
               

               
Cow position:
               
chr16:28066505-28066259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 112
               

               
Conread position:
               
595-834
               

               
Cow position:
               
chr16:25453080-25453318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 107
               

               
Conread position:
               
607-834
               

               
Cow position:
               
chr16:44662158-44661934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
611-816
               

               
Cow position:
               
chr16:54175827-54175618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
644-849
               

               
Cow position:
               
chr16:42734235-42734444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
645-819
               

               
Cow position:
               
chr16:5664179-5664006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
645-825
               

               
Cow position:
               
chr16:46520648-46520833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
650-832
               

               
Cow position:
               
chr16:7084033-7083853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
666-808
               

               
Cow position:
               
chr16:25937130-25936990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
666-825
               

               
Cow position:
               
chr16:28268486-28268642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
667-819
               

               
Cow position:
               
chr16:16238452-16238603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
667-825
               

               
Cow position:
               
chr16:42742168-42742325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
153, 29
               

               
Conread position:
               
671-801
               

               
Cow position:
               
chr16:48482437-48482564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
675-833
               

               
Cow position:
               
chr16:23790458-23790302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
676-788
               

               
Cow position:
               
chr16:48502293-48502404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
678-834
               

               
Cow position:
               
chr16:23096807-23096962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
678-834
               

               
Cow position:
               
chr16:23098698-23098543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
696-815
               

               
Cow position:
               
chr16:6266619-6266738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
696-834
               

               
Cow position:
               
chr16:46224243-46224380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
697-834
               

               
Cow position:
               
chr16:5591642-5591500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
698-834
               

               
Cow position:
               
chr16:36241473-36241337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
698-834
               

               
Cow position:
               
chr16:41161120-41161256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
704-834
               

               
Cow position:
               
chr16:56861642-56861512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
706-834
               

               
Cow position:
               
chr16:1565346-1565474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
707-822
               

               
Cow position:
               
chr16:1434526-1434411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
712-834
               

               
Cow position:
               
chr16:20968475-20968597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.