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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8021O16.3
        

               
Conread position:
               
1-410
               

               
Cow position:
               
chr17:997501-997964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
1-768
               

               
Cow position:
               
chr17:9753435-9752617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
829
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
73-286
               

               
Cow position:
               
chr17:8644484-8644271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
73-293
               

               
Cow position:
               
chr17:18884783-18885030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
73-304
               

               
Cow position:
               
chr17:20233778-20233533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr17:16699884-16700232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-387
               

               
Cow position:
               
chr17:41014753-41014399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
73-398
               

               
Cow position:
               
chr17:10445746-10445394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
73-402
               

               
Cow position:
               
chr17:2034085-2033712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
73-410
               

               
Cow position:
               
chr17:3197043-3197418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
73-429
               

               
Cow position:
               
chr17:11386047-11385654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
73-453
               

               
Cow position:
               
chr17:31986608-31987036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-469
               

               
Cow position:
               
chr17:23884225-23884648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
73-580
               

               
Cow position:
               
chr17:29472023-29471464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-721
               

               
Cow position:
               
chr17:29079916-29079256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 28
               

               
Conread position:
               
73-819
               

               
Cow position:
               
chr17:22563732-22562923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
73-824
               

               
Cow position:
               
chr17:20084239-20085040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
811
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
73-825
               

               
Cow position:
               
chr17:4480290-4481111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-825
               

               
Cow position:
               
chr17:6072120-6071306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
73-825
               

               
Cow position:
               
chr17:15374963-15374183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr17:453418-452616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
810
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr17:16117888-16118684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr17:20091053-20091842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr17:22773865-22774679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
834
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr17:27791202-27792011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
75-645
               

               
Cow position:
               
chr17:36790649-36790027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
75-808
               

               
Cow position:
               
chr17:13935577-13936344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
93-825
               

               
Cow position:
               
chr17:21767463-21766668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
122-398
               

               
Cow position:
               
chr17:19998621-19998323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
122-834
               

               
Cow position:
               
chr17:33792608-33791869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 344
               

               
Conread position:
               
128-410
               

               
Cow position:
               
chr17:24293629-24293325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
133-825
               

               
Cow position:
               
chr17:730979-731716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 310
               

               
Conread position:
               
138-522
               

               
Cow position:
               
chr17:2201806-2201390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
139-808
               

               
Cow position:
               
chr17:3549760-3550461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
140-579
               

               
Cow position:
               
chr17:50602-51073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
142-695
               

               
Cow position:
               
chr17:20078173-20078754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
142-764
               

               
Cow position:
               
chr17:17221803-17221149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
142-834
               

               
Cow position:
               
chr17:2177479-2176745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 171
               

               
Conread position:
               
142-834
               

               
Cow position:
               
chr17:4063834-4063103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
143-337
               

               
Cow position:
               
chr17:11382297-11382505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr17:28539495-28539247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
143-393
               

               
Cow position:
               
chr17:923126-922857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
143-395
               

               
Cow position:
               
chr17:34564851-34564581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr17:25834922-25834581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-457
               

               
Cow position:
               
chr17:18339972-18340316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-519
               

               
Cow position:
               
chr17:15559077-15558667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-519
               

               
Cow position:
               
chr17:16505241-16505651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-520
               

               
Cow position:
               
chr17:29083669-29083272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-526
               

               
Cow position:
               
chr17:8450215-8449801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
143-551
               

               
Cow position:
               
chr17:36284772-36284327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-551
               

               
Cow position:
               
chr17:39823689-39824134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr17:11913246-11913698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
143-635
               

               
Cow position:
               
chr17:36265776-36266292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-645
               

               
Cow position:
               
chr17:18777331-18777874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-686
               

               
Cow position:
               
chr17:3306090-3305483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-714
               

               
Cow position:
               
chr17:5638387-5639007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-714
               

               
Cow position:
               
chr17:5672015-5672635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-719
               

               
Cow position:
               
chr17:5805984-5806612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-767
               

               
Cow position:
               
chr17:34235746-34236422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-768
               

               
Cow position:
               
chr17:6612527-6611849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
143-819
               

               
Cow position:
               
chr17:15809493-15808764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-824
               

               
Cow position:
               
chr17:1784065-1784770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr17:1970656-1969922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-833
               

               
Cow position:
               
chr17:29156886-29156146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr17:2244568-2245294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr17:19214905-19215632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr17:20391279-20390536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr17:40811221-40810512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
144-571
               

               
Cow position:
               
chr17:40282504-40282048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
144-645
               

               
Cow position:
               
chr17:37415412-37415932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
144-815
               

               
Cow position:
               
chr17:30413457-30412752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
145-708
               

               
Cow position:
               
chr17:18201226-18200626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
145-772
               

               
Cow position:
               
chr17:29213126-29212456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
145-831
               

               
Cow position:
               
chr17:2079131-2078422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
146-834
               

               
Cow position:
               
chr17:4211436-4210691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 574
               

               
Conread position:
               
147-382
               

               
Cow position:
               
chr17:28024388-28024640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-404
               

               
Cow position:
               
chr17:5899072-5899338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 139
               

               
Conread position:
               
147-408
               

               
Cow position:
               
chr17:24618280-24617998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
147-410
               

               
Cow position:
               
chr17:15228326-15228617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-410
               

               
Cow position:
               
chr17:25567701-25567411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-457
               

               
Cow position:
               
chr17:13725765-13725424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
14, 182
               

               
Conread position:
               
147-644
               

               
Cow position:
               
chr17:16904082-16903542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 355
               

               
Conread position:
               
147-693
               

               
Cow position:
               
chr17:16446979-16447576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
147-760
               

               
Cow position:
               
chr17:20033887-20033275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr17:8223209-8222457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 574
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr17:14243335-14242596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 248
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr17:20093661-20094394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 273
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr17:20215583-20214864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 406
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr17:24026483-24027221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr17:25739799-25739066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 529
               

               
Conread position:
               
148-377
               

               
Cow position:
               
chr17:39485008-39484760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 177
               

               
Conread position:
               
148-474
               

               
Cow position:
               
chr17:18814649-18814298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
148-579
               

               
Cow position:
               
chr17:36817368-36816913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
148-825
               

               
Cow position:
               
chr17:6263356-6262628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 332
               

               
Conread position:
               
148-834
               

               
Cow position:
               
chr17:15328782-15328043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
150-336
               

               
Cow position:
               
chr17:4123302-4123503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
150-518
               

               
Cow position:
               
chr17:15334958-15335342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
151-846
               

               
Cow position:
               
chr17:932877-932150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
153-453
               

               
Cow position:
               
chr17:979691-980021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
156-724
               

               
Cow position:
               
chr17:14006901-14006299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
156-834
               

               
Cow position:
               
chr17:16854615-16855331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 370
               

               
Conread position:
               
157-464
               

               
Cow position:
               
chr17:21184834-21185144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
157-834
               

               
Cow position:
               
chr17:18591892-18591193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
158-337
               

               
Cow position:
               
chr17:38617129-38616932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr17:2081441-2081199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr17:21181978-21181732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr17:31671409-31671655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr17:3652236-3652563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr17:15093971-15094298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-527
               

               
Cow position:
               
chr17:36747031-36747434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 284
               

               
Conread position:
               
158-540
               

               
Cow position:
               
chr17:38992243-38991824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-544
               

               
Cow position:
               
chr17:21716953-21716529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-634
               

               
Cow position:
               
chr17:254584-254086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
158-635
               

               
Cow position:
               
chr17:6956130-6955614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 424
               

               
Conread position:
               
158-645
               

               
Cow position:
               
chr17:8212545-8212017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
158-645
               

               
Cow position:
               
chr17:20226092-20225558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-662
               

               
Cow position:
               
chr17:14212529-14213080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
158-721
               

               
Cow position:
               
chr17:17958087-17957482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 470
               

               
Conread position:
               
158-782
               

               
Cow position:
               
chr17:26829253-26829925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 588
               

               
Conread position:
               
158-785
               

               
Cow position:
               
chr17:43471100-43471776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 588
               

               
Conread position:
               
158-821
               

               
Cow position:
               
chr17:158768-158059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr17:2265679-2264964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 453
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr17:6123274-6122554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 589
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr17:15118307-15117588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 594
               

               
Conread position:
               
158-833
               

               
Cow position:
               
chr17:2839503-2838796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr17:148399-147683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 233
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr17:15439282-15438566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr17:20546628-20545900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr17:22248761-22249489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 588
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr17:23320929-23321660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 276
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr17:24785681-24784958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr17:29824469-29825199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 596
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr17:43991975-43991253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 228
               

               
Conread position:
               
159-832
               

               
Cow position:
               
chr17:6081978-6081275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 315
               

               
Conread position:
               
159-834
               

               
Cow position:
               
chr17:184637-183909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 594
               

               
Conread position:
               
160-411
               

               
Cow position:
               
chr17:5748371-5748630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
160-517
               

               
Cow position:
               
chr17:15701220-15701598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
160-525
               

               
Cow position:
               
chr17:7615202-7615597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 377
               

               
Conread position:
               
160-528
               

               
Cow position:
               
chr17:3315569-3315173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
160-528
               

               
Cow position:
               
chr17:13674017-13674396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
44, 133
               

               
Conread position:
               
160-580
               

               
Cow position:
               
chr17:21666488-21666029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
63, 340
               

               
Conread position:
               
160-714
               

               
Cow position:
               
chr17:23337571-23338169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
160-777
               

               
Cow position:
               
chr17:11083650-11084305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 527
               

               
Conread position:
               
160-801
               

               
Cow position:
               
chr17:31310794-31311433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
221, 62
               

               
Conread position:
               
160-806
               

               
Cow position:
               
chr17:2179317-2178658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
160-806
               

               
Cow position:
               
chr17:3328587-3327922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 163
               

               
Conread position:
               
160-822
               

               
Cow position:
               
chr17:10843762-10843043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 482
               

               
Conread position:
               
160-823
               

               
Cow position:
               
chr17:27978591-27977894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 402
               

               
Conread position:
               
160-825
               

               
Cow position:
               
chr17:10285404-10286086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
64, 200
               

               
Conread position:
               
160-828
               

               
Cow position:
               
chr17:20695667-20694969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
44, 270
               

               
Conread position:
               
160-831
               

               
Cow position:
               
chr17:144729-145407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr17:241775-241052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr17:18099588-18100313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr17:19405820-19406535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 431
               

               
Conread position:
               
161-768
               

               
Cow position:
               
chr17:20209387-20210055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 321
               

               
Conread position:
               
161-825
               

               
Cow position:
               
chr17:15722076-15721376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
60, 578
               

               
Conread position:
               
161-832
               

               
Cow position:
               
chr17:19235244-19234549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
161-882
               

               
Cow position:
               
chr17:1568734-1569504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
162-834
               

               
Cow position:
               
chr17:15854220-15853492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
164-834
               

               
Cow position:
               
chr17:1654274-1654999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
164-834
               

               
Cow position:
               
chr17:23723092-23722383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
169-834
               

               
Cow position:
               
chr17:1708278-1708967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
170-831
               

               
Cow position:
               
chr17:8205413-8204701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
171-801
               

               
Cow position:
               
chr17:14249629-14250322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
175-635
               

               
Cow position:
               
chr17:13910145-13910645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
186-788
               

               
Cow position:
               
chr17:37528509-37529164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 567
               

               
Conread position:
               
189-410
               

               
Cow position:
               
chr17:20272106-20272351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
189-825
               

               
Cow position:
               
chr17:14028887-14029574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 564
               

               
Conread position:
               
189-834
               

               
Cow position:
               
chr17:1456920-1457619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 560
               

               
Conread position:
               
207-645
               

               
Cow position:
               
chr17:13921660-13921202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
208-644
               

               
Cow position:
               
chr17:4635357-4635818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 181
               

               
Conread position:
               
208-825
               

               
Cow position:
               
chr17:38829311-38828692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
221-548
               

               
Cow position:
               
chr17:3781070-3780719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
221-548
               

               
Cow position:
               
chr17:29041485-29041836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 302
               

               
Conread position:
               
221-741
               

               
Cow position:
               
chr17:19369861-19369300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 310
               

               
Conread position:
               
221-825
               

               
Cow position:
               
chr17:21771100-21770451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 143
               

               
Conread position:
               
221-829
               

               
Cow position:
               
chr17:1883663-1883029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
17, 209
               

               
Conread position:
               
222-829
               

               
Cow position:
               
chr17:17128423-17127762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 271
               

               
Conread position:
               
227-729
               

               
Cow position:
               
chr17:38629537-38629041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 170
               

               
Conread position:
               
236-745
               

               
Cow position:
               
chr17:18242368-18241849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
243-825
               

               
Cow position:
               
chr17:30182185-30182809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 499
               

               
Conread position:
               
245-548
               

               
Cow position:
               
chr17:18324024-18324338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 152
               

               
Conread position:
               
245-834
               

               
Cow position:
               
chr17:17133718-17133107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
260-452
               

               
Cow position:
               
chr17:42313255-42313049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
263-720
               

               
Cow position:
               
chr17:18198722-18198230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
78, 369
               

               
Conread position:
               
267-834
               

               
Cow position:
               
chr17:4085427-4084830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 459
               

               
Conread position:
               
270-834
               

               
Cow position:
               
chr17:33289617-33290198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
277-476
               

               
Cow position:
               
chr17:40802101-40801893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
281-803
               

               
Cow position:
               
chr17:29229203-29228675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
287-834
               

               
Cow position:
               
chr17:138946-138375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
289-702
               

               
Cow position:
               
chr17:21304631-21304189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 408
               

               
Conread position:
               
290-616
               

               
Cow position:
               
chr17:2583728-2583377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 188
               

               
Conread position:
               
290-635
               

               
Cow position:
               
chr17:31233011-31232645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 181
               

               
Conread position:
               
290-811
               

               
Cow position:
               
chr17:11619536-11618987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
290-834
               

               
Cow position:
               
chr17:1311422-1312000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 442
               

               
Conread position:
               
292-834
               

               
Cow position:
               
chr17:15708654-15709231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 443
               

               
Conread position:
               
292-834
               

               
Cow position:
               
chr17:29950551-29949980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 225
               

               
Conread position:
               
296-581
               

               
Cow position:
               
chr17:29897970-29897667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
93, 220
               

               
Conread position:
               
315-834
               

               
Cow position:
               
chr17:5043276-5043826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
316-815
               

               
Cow position:
               
chr17:32407369-32407867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 203
               

               
Conread position:
               
319-693
               

               
Cow position:
               
chr17:15351348-15350951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
330-694
               

               
Cow position:
               
chr17:3237709-3237329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 239
               

               
Conread position:
               
341-818
               

               
Cow position:
               
chr17:10270073-10270569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
345-834
               

               
Cow position:
               
chr17:15140057-15140576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 385
               

               
Conread position:
               
348-834
               

               
Cow position:
               
chr17:20642988-20642476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
349-834
               

               
Cow position:
               
chr17:15307139-15307614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
354-644
               

               
Cow position:
               
chr17:14232431-14232747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
421-709
               

               
Cow position:
               
chr17:14865187-14865497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 295
               

               
Conread position:
               
421-765
               

               
Cow position:
               
chr17:30623-30264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 294
               

               
Conread position:
               
421-803
               

               
Cow position:
               
chr17:15228843-15229238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
422-834
               

               
Cow position:
               
chr17:21066476-21066905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
423-834
               

               
Cow position:
               
chr17:2033382-2032966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 277
               

               
Conread position:
               
426-809
               

               
Cow position:
               
chr17:11025095-11024688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 302
               

               
Conread position:
               
434-824
               

               
Cow position:
               
chr17:24292817-24292408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
435-834
               

               
Cow position:
               
chr17:33934658-33935075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 276
               

               
Conread position:
               
439-834
               

               
Cow position:
               
chr17:20089492-20089890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
457-833
               

               
Cow position:
               
chr17:34567946-34567564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
22, 183
               

               
Conread position:
               
490-754
               

               
Cow position:
               
chr17:11381437-11381158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
491-822
               

               
Cow position:
               
chr17:15325112-15325461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 224
               

               
Conread position:
               
491-822
               

               
Cow position:
               
chr17:44641346-44641696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr17:13931019-13930659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
505-834
               

               
Cow position:
               
chr17:1711798-1712135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
506-834
               

               
Cow position:
               
chr17:14240167-14239831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
513-834
               

               
Cow position:
               
chr17:17070003-17069682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
514-834
               

               
Cow position:
               
chr17:22106546-22106873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
515-825
               

               
Cow position:
               
chr17:602824-603147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
516-825
               

               
Cow position:
               
chr17:38916942-38917257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
522-825
               

               
Cow position:
               
chr17:14899803-14899494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
523-825
               

               
Cow position:
               
chr17:18721797-18722107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
528-766
               

               
Cow position:
               
chr17:2269889-2269638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 183
               

               
Conread position:
               
529-825
               

               
Cow position:
               
chr17:13674440-13674740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
530-834
               

               
Cow position:
               
chr17:11785958-11785646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
544-829
               

               
Cow position:
               
chr17:1565235-1564951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
569-834
               

               
Cow position:
               
chr17:3780488-3780213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
569-834
               

               
Cow position:
               
chr17:8994600-8994330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
570-834
               

               
Cow position:
               
chr17:9074181-9073912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
570-834
               

               
Cow position:
               
chr17:15719374-15719105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
573-834
               

               
Cow position:
               
chr17:3401697-3401434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
590-834
               

               
Cow position:
               
chr17:23510451-23510689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
160, 7
               

               
Conread position:
               
591-806
               

               
Cow position:
               
chr17:1706430-1706209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
593-834
               

               
Cow position:
               
chr17:18123927-18124169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
594-807
               

               
Cow position:
               
chr17:29821140-29820924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
600-863
               

               
Cow position:
               
chr17:9905494-9905760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
602-815
               

               
Cow position:
               
chr17:17383084-17382865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
609-831
               

               
Cow position:
               
chr17:36816651-36816431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
621-834
               

               
Cow position:
               
chr17:2583265-2583047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
625-831
               

               
Cow position:
               
chr17:41012505-41012298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
635-834
               

               
Cow position:
               
chr17:13920506-13920704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
645-834
               

               
Cow position:
               
chr17:5546429-5546617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
652-834
               

               
Cow position:
               
chr17:253768-253590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
666-834
               

               
Cow position:
               
chr17:9745882-9745717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
666-834
               

               
Cow position:
               
chr17:26829979-26830142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
667-834
               

               
Cow position:
               
chr17:14214104-14214267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
667-834
               

               
Cow position:
               
chr17:17087668-17087832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
669-793
               

               
Cow position:
               
chr17:51145-51267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
698-829
               

               
Cow position:
               
chr17:8211560-8211430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
698-834
               

               
Cow position:
               
chr17:12674548-12674684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
702-834
               

               
Cow position:
               
chr17:28025176-28025310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
707-834
               

               
Cow position:
               
chr17:3305266-3305141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
709-830
               

               
Cow position:
               
chr17:4570135-4570015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               
Show alignments to all cow chromosomes.