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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8021O16.3
        

               
Conread position:
               
52-759
               

               
Cow position:
               
chr25:18474716-18473958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
69-834
               

               
Cow position:
               
chr25:35567381-35568210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
70-645
               

               
Cow position:
               
chr25:35589577-35588946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr25:14568932-14568684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr25:26682066-26681732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
73-398
               

               
Cow position:
               
chr25:35625734-35626077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
73-579
               

               
Cow position:
               
chr25:39386330-39386891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
73-621
               

               
Cow position:
               
chr25:12755933-12756532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
73-643
               

               
Cow position:
               
chr25:18269955-18269336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
73-695
               

               
Cow position:
               
chr25:23394367-23393685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
73-782
               

               
Cow position:
               
chr25:25510394-25509599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
801
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
73-815
               

               
Cow position:
               
chr25:11666167-11665370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
809
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
73-825
               

               
Cow position:
               
chr25:25480134-25480925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
73-825
               

               
Cow position:
               
chr25:33838877-33838064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
73-825
               

               
Cow position:
               
chr25:41135253-41136050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
811
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr25:18072713-18071911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
73-849
               

               
Cow position:
               
chr25:25826955-25826112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
848
               

               
Alignm identity:
               
574
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
75-382
               

               
Cow position:
               
chr25:11895992-11896337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 16
               

               
Conread position:
               
75-405
               

               
Cow position:
               
chr25:22111792-22111433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
77-551
               

               
Cow position:
               
chr25:17992646-17993169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
80-692
               

               
Cow position:
               
chr25:13429629-13430292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
95-540
               

               
Cow position:
               
chr25:35446408-35445934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
122-290
               

               
Cow position:
               
chr25:17659007-17658835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
123-741
               

               
Cow position:
               
chr25:11956266-11955598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
127-768
               

               
Cow position:
               
chr25:26896476-26895811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
128-824
               

               
Cow position:
               
chr25:17658048-17657309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 171
               

               
Conread position:
               
130-773
               

               
Cow position:
               
chr25:41356368-41357062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
143-335
               

               
Cow position:
               
chr25:2047143-2047352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr25:9595730-9595473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr25:21966806-21966546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr25:27076474-27076218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
143-450
               

               
Cow position:
               
chr25:8935213-8934875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr25:15429263-15429604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr25:27145839-27145501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-491
               

               
Cow position:
               
chr25:4858081-4858464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-520
               

               
Cow position:
               
chr25:9055076-9054677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
143-522
               

               
Cow position:
               
chr25:17994881-17995287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
143-580
               

               
Cow position:
               
chr25:28275254-28275729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-635
               

               
Cow position:
               
chr25:37593820-37593280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
143-643
               

               
Cow position:
               
chr25:14755998-14756539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-692
               

               
Cow position:
               
chr25:13787381-13786790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
143-804
               

               
Cow position:
               
chr25:26353372-26354079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr25:18490488-18489747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr25:26755704-26754968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr25:28863286-28862545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr25:35754830-35755569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr25:32607104-32607362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
144-645
               

               
Cow position:
               
chr25:34164146-34164689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
144-796
               

               
Cow position:
               
chr25:3172002-3172687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
144-825
               

               
Cow position:
               
chr25:18189963-18190687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
144-834
               

               
Cow position:
               
chr25:23772860-23773567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
144-834
               

               
Cow position:
               
chr25:37648834-37648125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 229
               

               
Conread position:
               
145-617
               

               
Cow position:
               
chr25:2516416-2515902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
145-834
               

               
Cow position:
               
chr25:41121417-41120681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
146-418
               

               
Cow position:
               
chr25:35612922-35613219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
147-358
               

               
Cow position:
               
chr25:37447016-37446788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
147-382
               

               
Cow position:
               
chr25:18323944-18324200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-410
               

               
Cow position:
               
chr25:18023169-18022877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
10, 187
               

               
Conread position:
               
147-541
               

               
Cow position:
               
chr25:28264760-28264330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
147-549
               

               
Cow position:
               
chr25:24227933-24228361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
147-577
               

               
Cow position:
               
chr25:34343495-34343966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-631
               

               
Cow position:
               
chr25:27231762-27231241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
147-822
               

               
Cow position:
               
chr25:24654760-24655483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 361
               

               
Conread position:
               
147-827
               

               
Cow position:
               
chr25:23672453-23673180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr25:13960474-13959745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 283
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr25:23739828-23740568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
148-472
               

               
Cow position:
               
chr25:20613950-20613599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
11, 294
               

               
Conread position:
               
148-573
               

               
Cow position:
               
chr25:20075886-20075432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 328
               

               
Conread position:
               
148-741
               

               
Cow position:
               
chr25:18265604-18264964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 280
               

               
Conread position:
               
148-828
               

               
Cow position:
               
chr25:36512688-36511990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 208
               

               
Conread position:
               
148-834
               

               
Cow position:
               
chr25:41097784-41098522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 292
               

               
Conread position:
               
150-691
               

               
Cow position:
               
chr25:19367290-19367879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
150-834
               

               
Cow position:
               
chr25:9395821-9395093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
153-644
               

               
Cow position:
               
chr25:12081949-12082476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
153-834
               

               
Cow position:
               
chr25:26282433-26281699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 602
               

               
Conread position:
               
155-818
               

               
Cow position:
               
chr25:26914643-26913927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 279
               

               
Conread position:
               
157-834
               

               
Cow position:
               
chr25:26780682-26781408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 592
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr25:17994120-17994366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr25:34121692-34121939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-402
               

               
Cow position:
               
chr25:36127505-36127774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
158-403
               

               
Cow position:
               
chr25:34768082-34767817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
158-452
               

               
Cow position:
               
chr25:17808376-17808701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr25:3688538-3688211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr25:17210732-17211058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
158-465
               

               
Cow position:
               
chr25:9413746-9413410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-538
               

               
Cow position:
               
chr25:4522411-4522826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
158-540
               

               
Cow position:
               
chr25:8655692-8655273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-580
               

               
Cow position:
               
chr25:18330373-18330839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
158-645
               

               
Cow position:
               
chr25:32610017-32610542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 467
               

               
Conread position:
               
158-667
               

               
Cow position:
               
chr25:19923922-19923373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
158-692
               

               
Cow position:
               
chr25:26923246-26922657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
37, 349
               

               
Conread position:
               
158-708
               

               
Cow position:
               
chr25:19139169-19139772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 589
               

               
Conread position:
               
158-786
               

               
Cow position:
               
chr25:17905043-17904364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 589
               

               
Conread position:
               
158-811
               

               
Cow position:
               
chr25:37469191-37468547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
158-814
               

               
Cow position:
               
chr25:29802342-29803051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr25:20771934-20772648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 197
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr25:35554071-35553367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 581
               

               
Conread position:
               
158-829
               

               
Cow position:
               
chr25:17585613-17586339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 387
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr25:11044018-11043297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 377
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr25:19336924-19337647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 497
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr25:29525465-29526187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr25:36351141-36350414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 381
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr25:40389334-40390036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 319
               

               
Conread position:
               
159-410
               

               
Cow position:
               
chr25:16401489-16401768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
159-528
               

               
Cow position:
               
chr25:40321886-40322292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
159-540
               

               
Cow position:
               
chr25:37967364-37966945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
160-453
               

               
Cow position:
               
chr25:14954639-14954955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
160-453
               

               
Cow position:
               
chr25:34013358-34013677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 268
               

               
Conread position:
               
160-462
               

               
Cow position:
               
chr25:30525975-30526304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 159
               

               
Conread position:
               
160-580
               

               
Cow position:
               
chr25:16922395-16922852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
160-693
               

               
Cow position:
               
chr25:35039487-35040069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
160-732
               

               
Cow position:
               
chr25:21903838-21903227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 228
               

               
Conread position:
               
160-742
               

               
Cow position:
               
chr25:16801836-16801245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
65, 399
               

               
Conread position:
               
160-756
               

               
Cow position:
               
chr25:24302866-24303512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 170
               

               
Conread position:
               
160-782
               

               
Cow position:
               
chr25:23325625-23326300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 224
               

               
Conread position:
               
160-824
               

               
Cow position:
               
chr25:11929162-11929854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 158
               

               
Conread position:
               
160-825
               

               
Cow position:
               
chr25:29312921-29313631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 377
               

               
Conread position:
               
160-825
               

               
Cow position:
               
chr25:33687808-33688536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr25:18886083-18886793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 561
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr25:34508781-34509505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 590
               

               
Conread position:
               
161-765
               

               
Cow position:
               
chr25:24636744-24637400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
46, 485
               

               
Conread position:
               
161-824
               

               
Cow position:
               
chr25:33066191-33065506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
162-666
               

               
Cow position:
               
chr25:10012659-10013214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 382
               

               
Conread position:
               
163-774
               

               
Cow position:
               
chr25:9647350-9646699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
59, 466
               

               
Conread position:
               
165-462
               

               
Cow position:
               
chr25:14393709-14394019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
165-822
               

               
Cow position:
               
chr25:34673192-34673886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 413
               

               
Conread position:
               
168-551
               

               
Cow position:
               
chr25:7800409-7799996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 266
               

               
Conread position:
               
169-382
               

               
Cow position:
               
chr25:15453408-15453173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
169-815
               

               
Cow position:
               
chr25:13941343-13942035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 360
               

               
Conread position:
               
170-410
               

               
Cow position:
               
chr25:9957405-9957648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
170-831
               

               
Cow position:
               
chr25:20495927-20495249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
172-580
               

               
Cow position:
               
chr25:22151494-22151042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
173-824
               

               
Cow position:
               
chr25:18129589-18128920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 219
               

               
Conread position:
               
175-538
               

               
Cow position:
               
chr25:18486844-18486451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 294
               

               
Conread position:
               
180-645
               

               
Cow position:
               
chr25:6955448-6954936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
180-764
               

               
Cow position:
               
chr25:26705501-26706138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 570
               

               
Conread position:
               
186-831
               

               
Cow position:
               
chr25:2595141-2594455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 159
               

               
Conread position:
               
189-597
               

               
Cow position:
               
chr25:23914038-23913588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
30, 241
               

               
Conread position:
               
201-825
               

               
Cow position:
               
chr25:12938847-12939524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 307
               

               
Conread position:
               
220-825
               

               
Cow position:
               
chr25:10137146-10136507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 252
               

               
Conread position:
               
221-803
               

               
Cow position:
               
chr25:24204805-24205402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
221-834
               

               
Cow position:
               
chr25:27018905-27019563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 312
               

               
Conread position:
               
225-834
               

               
Cow position:
               
chr25:7223104-7223757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 519
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr25:23366983-23366649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
235-775
               

               
Cow position:
               
chr25:34668263-34667699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
241-834
               

               
Cow position:
               
chr25:393570-392948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 489
               

               
Conread position:
               
246-824
               

               
Cow position:
               
chr25:33574437-33575041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
257-812
               

               
Cow position:
               
chr25:17562322-17561744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
290-540
               

               
Cow position:
               
chr25:29357759-29358029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
290-834
               

               
Cow position:
               
chr25:34502969-34503555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 447
               

               
Conread position:
               
291-778
               

               
Cow position:
               
chr25:18208435-18208952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
291-834
               

               
Cow position:
               
chr25:32577410-32577989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 442
               

               
Conread position:
               
292-764
               

               
Cow position:
               
chr25:31073345-31073853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
47, 437
               

               
Conread position:
               
294-819
               

               
Cow position:
               
chr25:23998941-23999488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 180
               

               
Conread position:
               
302-815
               

               
Cow position:
               
chr25:26931337-26930788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 431
               

               
Conread position:
               
315-825
               

               
Cow position:
               
chr25:20633988-20633450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 278
               

               
Conread position:
               
317-795
               

               
Cow position:
               
chr25:449581-450073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
345-834
               

               
Cow position:
               
chr25:10633815-10634331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
345-834
               

               
Cow position:
               
chr25:21968368-21967843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
414-645
               

               
Cow position:
               
chr25:14790319-14790076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
414-769
               

               
Cow position:
               
chr25:9957943-9958312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr25:21949907-21949473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 205
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr25:35571928-35571494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 300
               

               
Conread position:
               
422-807
               

               
Cow position:
               
chr25:20100719-20100316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 96
               

               
Conread position:
               
428-788
               

               
Cow position:
               
chr25:11896719-11896338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 293
               

               
Conread position:
               
442-767
               

               
Cow position:
               
chr25:40657612-40657276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr25:24007944-24007582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
514-804
               

               
Cow position:
               
chr25:8875538-8875836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
514-828
               

               
Cow position:
               
chr25:25731539-25731224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
536-834
               

               
Cow position:
               
chr25:3373656-3373968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 173
               

               
Conread position:
               
537-834
               

               
Cow position:
               
chr25:25109029-25109353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 154
               

               
Conread position:
               
545-834
               

               
Cow position:
               
chr25:22197414-22197712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
545-834
               

               
Cow position:
               
chr25:34257134-34257432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
567-832
               

               
Cow position:
               
chr25:35561554-35561821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
569-807
               

               
Cow position:
               
chr25:1972734-1972971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
569-807
               

               
Cow position:
               
chr25:24670627-24670866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
569-835
               

               
Cow position:
               
chr25:10704401-10704128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 139
               

               
Conread position:
               
570-834
               

               
Cow position:
               
chr25:34369076-34368807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
583-771
               

               
Cow position:
               
chr25:23912963-23912771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
591-825
               

               
Cow position:
               
chr25:17554546-17554788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
591-834
               

               
Cow position:
               
chr25:33990326-33990571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 112
               

               
Conread position:
               
592-825
               

               
Cow position:
               
chr25:16923220-16923450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
592-834
               

               
Cow position:
               
chr25:22150998-22150750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
594-787
               

               
Cow position:
               
chr25:24228568-24228766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
595-815
               

               
Cow position:
               
chr25:18423626-18423405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
596-816
               

               
Cow position:
               
chr25:30340801-30341028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
609-834
               

               
Cow position:
               
chr25:24449335-24449563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
621-815
               

               
Cow position:
               
chr25:18179913-18179715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
645-824
               

               
Cow position:
               
chr25:12082974-12083146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
666-834
               

               
Cow position:
               
chr25:39387477-39387310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
669-808
               

               
Cow position:
               
chr25:29134259-29134396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
689-828
               

               
Cow position:
               
chr25:12834762-12834900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
697-833
               

               
Cow position:
               
chr25:39554814-39554950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.