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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8021O16.3
        

               
Conread position:
               
62-834
               

               
Cow position:
               
chr27:4331013-4331855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
70-825
               

               
Cow position:
               
chr27:26330646-26329827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
73-381
               

               
Cow position:
               
chr27:23454688-23454349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr27:8187534-8187204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
73-409
               

               
Cow position:
               
chr27:10324219-10324590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
73-410
               

               
Cow position:
               
chr27:12751245-12750871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
73-505
               

               
Cow position:
               
chr27:9090345-9089878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
73-522
               

               
Cow position:
               
chr27:21350560-21350064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
73-580
               

               
Cow position:
               
chr27:10384147-10383596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
73-580
               

               
Cow position:
               
chr27:13901839-13901272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
73-825
               

               
Cow position:
               
chr27:1189358-1188549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr27:165205-166032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr27:15272361-15273187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr27:20811132-20810306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr27:26856756-26855951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
74-632
               

               
Cow position:
               
chr27:4819113-4818508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
78-822
               

               
Cow position:
               
chr27:8973156-8972343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
96-537
               

               
Cow position:
               
chr27:25112844-25112359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
100-685
               

               
Cow position:
               
chr27:22330165-22329529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
121-332
               

               
Cow position:
               
chr27:5853400-5853169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
122-622
               

               
Cow position:
               
chr27:11256034-11256563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
122-815
               

               
Cow position:
               
chr27:21452097-21451349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
122-834
               

               
Cow position:
               
chr27:25800558-25801320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 341
               

               
Conread position:
               
123-644
               

               
Cow position:
               
chr27:13182638-13183183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 289
               

               
Conread position:
               
139-834
               

               
Cow position:
               
chr27:27234519-27235220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
142-293
               

               
Cow position:
               
chr27:12549651-12549811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
142-644
               

               
Cow position:
               
chr27:15349264-15348742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
142-819
               

               
Cow position:
               
chr27:5990426-5991140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
143-293
               

               
Cow position:
               
chr27:8743475-8743627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-293
               

               
Cow position:
               
chr27:26598418-26598578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
10, 101
               

               
Conread position:
               
143-337
               

               
Cow position:
               
chr27:26545383-26545176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-364
               

               
Cow position:
               
chr27:12190902-12190660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-366
               

               
Cow position:
               
chr27:30176885-30177130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr27:9989253-9989511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr27:20001188-20001448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-410
               

               
Cow position:
               
chr27:8262467-8262173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr27:791418-791759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr27:3650109-3649768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr27:28984394-28984031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
143-506
               

               
Cow position:
               
chr27:19388562-19388960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
143-540
               

               
Cow position:
               
chr27:15866673-15867101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
143-573
               

               
Cow position:
               
chr27:30036506-30036031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
143-580
               

               
Cow position:
               
chr27:2332128-2331651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-644
               

               
Cow position:
               
chr27:15033264-15033811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-692
               

               
Cow position:
               
chr27:12006776-12006174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-693
               

               
Cow position:
               
chr27:1502121-1501562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
143-717
               

               
Cow position:
               
chr27:15871704-15872324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-748
               

               
Cow position:
               
chr27:25784136-25784782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-759
               

               
Cow position:
               
chr27:344302-344963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-795
               

               
Cow position:
               
chr27:22797031-22797732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-797
               

               
Cow position:
               
chr27:8201564-8200860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-804
               

               
Cow position:
               
chr27:11434790-11434091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr27:24295632-24296373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr27:26785440-26784716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr27:3231910-3232649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr27:29035754-29036484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr27:29811929-29811216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
144-503
               

               
Cow position:
               
chr27:16331862-16332243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
144-733
               

               
Cow position:
               
chr27:12282311-12281684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
145-525
               

               
Cow position:
               
chr27:26644629-26645042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
145-528
               

               
Cow position:
               
chr27:5268972-5268571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
145-778
               

               
Cow position:
               
chr27:11490246-11489579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
146-541
               

               
Cow position:
               
chr27:25676802-25677217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
146-742
               

               
Cow position:
               
chr27:11481558-11480908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 596
               

               
Conread position:
               
146-819
               

               
Cow position:
               
chr27:8427483-8426758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
147-383
               

               
Cow position:
               
chr27:30777094-30777358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
147-535
               

               
Cow position:
               
chr27:10306729-10306319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
147-580
               

               
Cow position:
               
chr27:9333293-9332826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 291
               

               
Conread position:
               
147-665
               

               
Cow position:
               
chr27:9262652-9263216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 452
               

               
Conread position:
               
147-755
               

               
Cow position:
               
chr27:19931931-19932598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 183
               

               
Conread position:
               
148-387
               

               
Cow position:
               
chr27:28924504-28924249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
148-410
               

               
Cow position:
               
chr27:28907610-28907894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
148-831
               

               
Cow position:
               
chr27:4982985-4982260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 113
               

               
Conread position:
               
150-721
               

               
Cow position:
               
chr27:4805399-4804784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
150-834
               

               
Cow position:
               
chr27:1521296-1520565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 289
               

               
Conread position:
               
152-623
               

               
Cow position:
               
chr27:4665028-4665505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 227
               

               
Conread position:
               
153-693
               

               
Cow position:
               
chr27:6523663-6524254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 96
               

               
Conread position:
               
153-733
               

               
Cow position:
               
chr27:8291468-8290832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
71, 288
               

               
Conread position:
               
153-849
               

               
Cow position:
               
chr27:27501806-27501100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 110
               

               
Conread position:
               
155-832
               

               
Cow position:
               
chr27:8727208-8726470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
156-807
               

               
Cow position:
               
chr27:27292009-27291299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 559
               

               
Conread position:
               
156-832
               

               
Cow position:
               
chr27:9254528-9255249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
157-410
               

               
Cow position:
               
chr27:13409613-13409330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
157-834
               

               
Cow position:
               
chr27:5983416-5984145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 595
               

               
Conread position:
               
158-335
               

               
Cow position:
               
chr27:1293861-1293666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr27:8202386-8202632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr27:13422550-13422796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr27:16045344-16045097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
158-411
               

               
Cow position:
               
chr27:1030940-1031220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
158-452
               

               
Cow position:
               
chr27:19299952-19300278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
158-504
               

               
Cow position:
               
chr27:15100253-15099876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
158-562
               

               
Cow position:
               
chr27:1141309-1140864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
158-710
               

               
Cow position:
               
chr27:4824415-4823834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
158-725
               

               
Cow position:
               
chr27:3653086-3653705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 588
               

               
Conread position:
               
158-747
               

               
Cow position:
               
chr27:12277720-12277083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
158-819
               

               
Cow position:
               
chr27:27557411-27556708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
158-822
               

               
Cow position:
               
chr27:13353919-13353203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 594
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr27:1081563-1082277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr27:2001458-2000730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 328
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr27:8959403-8960144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 601
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr27:10579557-10578831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr27:16030783-16031512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr27:29446491-29447191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 566
               

               
Conread position:
               
159-302
               

               
Cow position:
               
chr27:13198457-13198614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
159-710
               

               
Cow position:
               
chr27:4829121-4828507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
159-834
               

               
Cow position:
               
chr27:14297818-14297103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 586
               

               
Conread position:
               
160-744
               

               
Cow position:
               
chr27:30306654-30307293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 111
               

               
Conread position:
               
160-768
               

               
Cow position:
               
chr27:3993727-3994354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
70, 191
               

               
Conread position:
               
160-813
               

               
Cow position:
               
chr27:2557382-2558085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 340
               

               
Conread position:
               
160-825
               

               
Cow position:
               
chr27:19523098-19523814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 326
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr27:31249826-31249131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 65
               

               
Conread position:
               
161-825
               

               
Cow position:
               
chr27:27728882-27729593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
161-834
               

               
Cow position:
               
chr27:15406230-15405534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 276
               

               
Conread position:
               
162-834
               

               
Cow position:
               
chr27:31268824-31268111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 224
               

               
Conread position:
               
164-688
               

               
Cow position:
               
chr27:20765319-20764797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
168-834
               

               
Cow position:
               
chr27:15633743-15634449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
170-825
               

               
Cow position:
               
chr27:21283644-21284335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
180-835
               

               
Cow position:
               
chr27:5925854-5925157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 265
               

               
Conread position:
               
181-571
               

               
Cow position:
               
chr27:2682113-2681680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
186-746
               

               
Cow position:
               
chr27:19423804-19424405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
189-710
               

               
Cow position:
               
chr27:8592956-8592408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
191-581
               

               
Cow position:
               
chr27:13317136-13316706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
34, 288
               

               
Conread position:
               
208-534
               

               
Cow position:
               
chr27:12239623-12239271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
208-746
               

               
Cow position:
               
chr27:3990245-3990827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 502
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr27:816216-816486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 246
               

               
Conread position:
               
221-579
               

               
Cow position:
               
chr27:9970714-9970320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
221-630
               

               
Cow position:
               
chr27:25791996-25792437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
247-824
               

               
Cow position:
               
chr27:1536685-1536076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 284
               

               
Conread position:
               
248-614
               

               
Cow position:
               
chr27:21392519-21392122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
253-693
               

               
Cow position:
               
chr27:14669692-14669225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 281
               

               
Conread position:
               
254-474
               

               
Cow position:
               
chr27:4834644-4834412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 193
               

               
Conread position:
               
260-767
               

               
Cow position:
               
chr27:27930693-27930178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 178
               

               
Conread position:
               
262-834
               

               
Cow position:
               
chr27:5914421-5913824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 456
               

               
Conread position:
               
273-532
               

               
Cow position:
               
chr27:2848953-2849210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
277-615
               

               
Cow position:
               
chr27:24239653-24240003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
62, 141
               

               
Conread position:
               
277-725
               

               
Cow position:
               
chr27:14380779-14380315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
277-834
               

               
Cow position:
               
chr27:25964487-25965071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 141
               

               
Conread position:
               
287-540
               

               
Cow position:
               
chr27:16787831-16788102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
52, 181
               

               
Conread position:
               
290-519
               

               
Cow position:
               
chr27:30677622-30677860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
290-631
               

               
Cow position:
               
chr27:29467392-29467025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
301-824
               

               
Cow position:
               
chr27:17568548-17567998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
311-645
               

               
Cow position:
               
chr27:4811664-4811317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
313-834
               

               
Cow position:
               
chr27:15375245-15374706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 109
               

               
Conread position:
               
315-819
               

               
Cow position:
               
chr27:23317513-23318033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
26, 128
               

               
Conread position:
               
315-834
               

               
Cow position:
               
chr27:27045613-27045068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 276
               

               
Conread position:
               
325-776
               

               
Cow position:
               
chr27:27279143-27278669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
16, 150
               

               
Conread position:
               
336-631
               

               
Cow position:
               
chr27:15697757-15697443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
336-819
               

               
Cow position:
               
chr27:13309058-13308544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 395
               

               
Conread position:
               
341-834
               

               
Cow position:
               
chr27:25971191-25971715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 267
               

               
Conread position:
               
382-796
               

               
Cow position:
               
chr27:28051422-28051847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 334
               

               
Conread position:
               
386-825
               

               
Cow position:
               
chr27:9989843-9990315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
30, 200
               

               
Conread position:
               
413-748
               

               
Cow position:
               
chr27:18473567-18473227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr27:15544335-15543900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
430-782
               

               
Cow position:
               
chr27:4768742-4768372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
431-834
               

               
Cow position:
               
chr27:12750334-12749918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 288
               

               
Conread position:
               
440-824
               

               
Cow position:
               
chr27:21203905-21204307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 280
               

               
Conread position:
               
491-836
               

               
Cow position:
               
chr27:27849517-27849153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
492-822
               

               
Cow position:
               
chr27:3760118-3759770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 144
               

               
Conread position:
               
506-778
               

               
Cow position:
               
chr27:525878-526157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
506-825
               

               
Cow position:
               
chr27:27666227-27665895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
519-814
               

               
Cow position:
               
chr27:21342736-21342434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
521-834
               

               
Cow position:
               
chr27:27193160-27193476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
522-787
               

               
Cow position:
               
chr27:28895207-28894940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
538-830
               

               
Cow position:
               
chr27:17422775-17422481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
554-768
               

               
Cow position:
               
chr27:219637-219850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
569-825
               

               
Cow position:
               
chr27:6030921-6030668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 132
               

               
Conread position:
               
569-834
               

               
Cow position:
               
chr27:12146488-12146758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
570-834
               

               
Cow position:
               
chr27:30035974-30035700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
572-802
               

               
Cow position:
               
chr27:15925767-15926002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
576-825
               

               
Cow position:
               
chr27:10379334-10379081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
591-825
               

               
Cow position:
               
chr27:13901027-13900788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
591-834
               

               
Cow position:
               
chr27:7912113-7911868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
591-834
               

               
Cow position:
               
chr27:22647773-22648021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
609-815
               

               
Cow position:
               
chr27:24571688-24571898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
609-834
               

               
Cow position:
               
chr27:30571944-30571718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
647-834
               

               
Cow position:
               
chr27:22742343-22742529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
666-825
               

               
Cow position:
               
chr27:22723407-22723251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
673-822
               

               
Cow position:
               
chr27:26599958-26599810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
693-834
               

               
Cow position:
               
chr27:1501586-1501446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
696-834
               

               
Cow position:
               
chr27:22329237-22329099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
698-834
               

               
Cow position:
               
chr27:773796-773660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
698-834
               

               
Cow position:
               
chr27:18697362-18697226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
701-834
               

               
Cow position:
               
chr27:20716912-20716779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
704-834
               

               
Cow position:
               
chr27:15034079-15034208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
712-824
               

               
Cow position:
               
chr27:8261856-8261744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
716-830
               

               
Cow position:
               
chr27:8592069-8591955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
719-829
               

               
Cow position:
               
chr27:9332747-9332638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               
Show alignments to all cow chromosomes.