Cow genome map

Conread name: Ss1.1-Pig4-TMW8021O16.3

Conread position: 1-382
Cow position: chr28:28185407-28185005 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 261
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 73

Conread position: 1-454
Cow position: chr28:10589419-10589912 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 333
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 55, 112

Conread position: 62-382
Cow position: chr28:10563167-10562818 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 29

Conread position: 70-822
Cow position: chr28:17602280-17603086 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 625

Conread position: 73-376
Cow position: chr28:25767736-25767395 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 28

Conread position: 73-410
Cow position: chr28:22322759-22322389 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 72, 34

Conread position: 73-436
Cow position: chr28:29199236-29198827 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 31

Conread position: 73-457
Cow position: chr28:20964113-20964546 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 290
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 73-467
Cow position: chr28:19194269-19193839 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 53

Conread position: 73-539
Cow position: chr28:25762546-25762077 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 338
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 37

Conread position: 73-556
Cow position: chr28:17209224-17209741 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 329
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 39

Conread position: 73-580
Cow position: chr28:29222525-29223091 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 387
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 34

Conread position: 73-635
Cow position: chr28:23615915-23615278 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 436
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 18

Conread position: 73-644
Cow position: chr28:2280172-2280775 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 34

Conread position: 73-644
Cow position: chr28:16597909-16597276 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 421
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 31

Conread position: 73-645
Cow position: chr28:5805025-5804394 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 34

Conread position: 73-825
Cow position: chr28:5747944-5748766 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 18

Conread position: 73-825
Cow position: chr28:33256070-33255261 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 73-831
Cow position: chr28:10772832-10772019 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 39

Conread position: 73-834
Cow position: chr28:34598002-34597175 (view UCSC Genome Browser custom track)
Alignm length: 832
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 28

Conread position: 74-282
Cow position: chr28:32717496-32717705 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 64

Conread position: 75-444
Cow position: chr28:13865306-13864892 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 291
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 32

Conread position: 76-388
Cow position: chr28:23839719-23839376 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 36

Conread position: 77-382
Cow position: chr28:16387074-16386759 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 15, 35

Conread position: 77-402
Cow position: chr28:15272753-15273116 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 35

Conread position: 114-834
Cow position: chr28:8717252-8718022 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 14

Conread position: 120-382
Cow position: chr28:28116311-28116027 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 122-389
Cow position: chr28:2522821-2522539 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 171

Conread position: 122-539
Cow position: chr28:23868930-23868479 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 313
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 18, 28

Conread position: 122-828
Cow position: chr28:29823884-29823123 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 419

Conread position: 128-834
Cow position: chr28:17599285-17600054 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 498
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 12, 30

Conread position: 139-410
Cow position: chr28:25248800-25248500 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 139-808
Cow position: chr28:30961212-30960503 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 57

Conread position: 142-377
Cow position: chr28:25804546-25804290 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 14

Conread position: 142-555
Cow position: chr28:5768622-5768175 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 78, 11

Conread position: 142-718
Cow position: chr28:34082595-34083222 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 14

Conread position: 143-329
Cow position: chr28:22353785-22353588 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 10

Conread position: 143-337
Cow position: chr28:25128563-25128768 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 16

Conread position: 143-337
Cow position: chr28:29726589-29726381 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 13

Conread position: 143-378
Cow position: chr28:25424923-25425174 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 74, 13

Conread position: 143-382
Cow position: chr28:13889321-13889581 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 79, 13

Conread position: 143-382
Cow position: chr28:23773684-23773944 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 13

Conread position: 143-387
Cow position: chr28:34850823-34850563 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 13

Conread position: 143-446
Cow position: chr28:11787288-11787615 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 82, 13

Conread position: 143-528
Cow position: chr28:16211673-16212074 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 70

Conread position: 143-548
Cow position: chr28:19300694-19300288 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 294
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 80, 13

Conread position: 143-551
Cow position: chr28:10870763-10870319 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 302
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 16

Conread position: 143-579
Cow position: chr28:14234410-14233960 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 143-580
Cow position: chr28:32589373-32588893 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 325
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 10, 16

Conread position: 143-606
Cow position: chr28:29806771-29807275 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 347
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 8, 18

Conread position: 143-622
Cow position: chr28:28723892-28723376 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 354
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 8, 17

Conread position: 143-626
Cow position: chr28:1943622-1944151 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 16

Conread position: 143-627
Cow position: chr28:24487721-24488242 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 348
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 17

Conread position: 143-644
Cow position: chr28:10473627-10473093 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 362
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 79, 13

Conread position: 143-645
Cow position: chr28:1198869-1198320 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 367
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 10, 16

Conread position: 143-698
Cow position: chr28:8786980-8786384 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 16

Conread position: 143-736
Cow position: chr28:25409304-25408659 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 13

Conread position: 143-783
Cow position: chr28:9287719-9288411 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 16

Conread position: 143-791
Cow position: chr28:5817276-5816610 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 89

Conread position: 143-811
Cow position: chr28:14150661-14149949 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 143-815
Cow position: chr28:6535123-6535848 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 13

Conread position: 143-815
Cow position: chr28:7059904-7059180 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 16

Conread position: 143-819
Cow position: chr28:16182022-16181314 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 16

Conread position: 143-822
Cow position: chr28:6959905-6959172 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 143-822
Cow position: chr28:7336660-7335926 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 13

Conread position: 143-825
Cow position: chr28:1957037-1956311 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 16

Conread position: 143-825
Cow position: chr28:4957828-4958569 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 143-825
Cow position: chr28:5825519-5824775 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 13

Conread position: 143-825
Cow position: chr28:7005702-7004966 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 143-825
Cow position: chr28:19834772-19834047 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 13

Conread position: 143-825
Cow position: chr28:20934725-20935473 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 13

Conread position: 143-825
Cow position: chr28:23309662-23310394 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 16

Conread position: 143-834
Cow position: chr28:786332-785598 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 9

Conread position: 143-834
Cow position: chr28:1508550-1507807 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 13

Conread position: 143-834
Cow position: chr28:6047465-6046728 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 143-834
Cow position: chr28:10303511-10302772 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 16

Conread position: 143-834
Cow position: chr28:12650892-12650161 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 135

Conread position: 143-834
Cow position: chr28:21380164-21379437 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 13

Conread position: 143-834
Cow position: chr28:28357111-28357852 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 16

Conread position: 143-834
Cow position: chr28:33640243-33639501 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 19

Conread position: 143-835
Cow position: chr28:4214565-4213823 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 16

Conread position: 144-295
Cow position: chr28:7722908-7723063 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 81, 12

Conread position: 144-387
Cow position: chr28:10190571-10190830 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 12

Conread position: 144-450
Cow position: chr28:13357293-13357623 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 9, 15

Conread position: 144-528
Cow position: chr28:22486141-22485727 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 278
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 18

Conread position: 144-547
Cow position: chr28:12406504-12406929 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 15

Conread position: 144-558
Cow position: chr28:20310609-20310160 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 300
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 12

Conread position: 144-579
Cow position: chr28:13725584-13725130 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 310
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 7, 19

Conread position: 144-834
Cow position: chr28:5111051-5111791 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 18

Conread position: 144-834
Cow position: chr28:29435132-29435855 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 16

Conread position: 145-466
Cow position: chr28:30328254-30328604 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 14

Conread position: 145-744
Cow position: chr28:32199069-32198438 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 394
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 14

Conread position: 145-796
Cow position: chr28:1383781-1384506 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 15

Conread position: 145-818
Cow position: chr28:26419329-26420053 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 15

Conread position: 145-823
Cow position: chr28:14666803-14666089 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 14

Conread position: 145-825
Cow position: chr28:5211793-5211062 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 11

Conread position: 145-825
Cow position: chr28:23793904-23794621 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 14

Conread position: 145-834
Cow position: chr28:958531-957807 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 14

Conread position: 145-834
Cow position: chr28:10280499-10279785 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 13

Conread position: 145-834
Cow position: chr28:13463635-13462895 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 11

Conread position: 145-834
Cow position: chr28:15429334-15428604 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 11

Conread position: 146-457
Cow position: chr28:12156352-12156008 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 288

Conread position: 146-645
Cow position: chr28:3001195-3001731 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 13

Conread position: 146-707
Cow position: chr28:32300936-32301532 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 389
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 43

Conread position: 146-834
Cow position: chr28:18516472-18517214 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 574

Conread position: 147-290
Cow position: chr28:3770573-3770726 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 147-374
Cow position: chr28:26727994-26728243 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 247

Conread position: 147-382
Cow position: chr28:24603598-24603340 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 147-382
Cow position: chr28:30532325-30532580 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 46

Conread position: 147-459
Cow position: chr28:25726792-25726453 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 11

Conread position: 147-467
Cow position: chr28:23544295-23543941 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 147-528
Cow position: chr28:15677304-15676890 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 277
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 78, 14

Conread position: 147-546
Cow position: chr28:24997239-24997679 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 12, 155

Conread position: 147-611
Cow position: chr28:12935601-12936115 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 356

Conread position: 147-722
Cow position: chr28:18140059-18140654 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 88

Conread position: 147-788
Cow position: chr28:17663277-17663972 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 573

Conread position: 147-799
Cow position: chr28:13523351-13522653 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 358

Conread position: 147-819
Cow position: chr28:30098548-30097824 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 341

Conread position: 147-820
Cow position: chr28:600517-601228 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 172

Conread position: 147-822
Cow position: chr28:5941158-5940429 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 339

Conread position: 147-828
Cow position: chr28:23675476-23674740 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 135

Conread position: 147-834
Cow position: chr28:1811324-1812028 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 152

Conread position: 147-834
Cow position: chr28:15032447-15033147 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 147-834
Cow position: chr28:29035979-29036721 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 574

Conread position: 148-337
Cow position: chr28:3012515-3012725 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 148-437
Cow position: chr28:24645130-24644810 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 72, 13

Conread position: 148-824
Cow position: chr28:21363187-21362455 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 125

Conread position: 148-834
Cow position: chr28:26922962-26923698 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 150-777
Cow position: chr28:14448257-14447593 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 419
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 11

Conread position: 150-834
Cow position: chr28:10295456-10294746 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 9

Conread position: 151-815
Cow position: chr28:3646090-3645399 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 152-382
Cow position: chr28:12981142-12981393 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 9

Conread position: 154-834
Cow position: chr28:25826448-25827182 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 602

Conread position: 157-834
Cow position: chr28:17369714-17369020 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 282

Conread position: 158-293
Cow position: chr28:3882503-3882358 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 158-382
Cow position: chr28:332108-331862 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 158-382
Cow position: chr28:15965934-15966180 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 158-382
Cow position: chr28:18559316-18559562 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 158-382
Cow position: chr28:19185883-19185637 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 158-382
Cow position: chr28:22735734-22735499 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 135

Conread position: 158-382
Cow position: chr28:27478428-27478182 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 158-394
Cow position: chr28:1837406-1837153 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 112

Conread position: 158-439
Cow position: chr28:5792116-5791817 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 67, 154

Conread position: 158-453
Cow position: chr28:9710494-9710821 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 158-453
Cow position: chr28:12701527-12701200 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 158-453
Cow position: chr28:30031999-30031675 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 112

Conread position: 158-453
Cow position: chr28:30249786-30249459 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 158-454
Cow position: chr28:615641-615322 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 298

Conread position: 158-467
Cow position: chr28:7830221-7829876 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 11

Conread position: 158-512
Cow position: chr28:6319491-6319873 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 224

Conread position: 158-528
Cow position: chr28:5336145-5336550 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 64, 343

Conread position: 158-555
Cow position: chr28:7888425-7888852 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 253
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 329

Conread position: 158-578
Cow position: chr28:34878790-34879244 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 302
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 235

Conread position: 158-580
Cow position: chr28:2222706-2223172 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 314
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 117

Conread position: 158-580
Cow position: chr28:25829055-25828589 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 319
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 0

Conread position: 158-595
Cow position: chr28:12429863-12429383 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 29

Conread position: 158-675
Cow position: chr28:34655744-34655205 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 200
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 254

Conread position: 158-693
Cow position: chr28:25847658-25847094 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 367
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 47

Conread position: 158-708
Cow position: chr28:30870731-30870137 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 9

Conread position: 158-777
Cow position: chr28:17030437-17031102 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 330

Conread position: 158-811
Cow position: chr28:22201602-22200920 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 448
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 40

Conread position: 158-829
Cow position: chr28:7906887-7907608 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 349

Conread position: 158-834
Cow position: chr28:445059-444339 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 67

Conread position: 158-834
Cow position: chr28:482050-482777 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 593

Conread position: 158-834
Cow position: chr28:2645373-2644646 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 269

Conread position: 158-834
Cow position: chr28:3745609-3744903 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 52

Conread position: 158-834
Cow position: chr28:5637710-5636982 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 491

Conread position: 158-834
Cow position: chr28:6478878-6478152 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 350

Conread position: 158-834
Cow position: chr28:9182529-9181802 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 595

Conread position: 158-834
Cow position: chr28:20967009-20967738 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 595

Conread position: 158-834
Cow position: chr28:23620591-23619896 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 11

Conread position: 158-834
Cow position: chr28:24886519-24885792 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 594

Conread position: 158-834
Cow position: chr28:28471677-28470954 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 91

Conread position: 158-834
Cow position: chr28:28934303-28935032 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 597

Conread position: 158-834
Cow position: chr28:34731391-34730665 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 228

Conread position: 160-369
Cow position: chr28:2948946-2948726 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 14

Conread position: 160-387
Cow position: chr28:9419946-9420191 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 160-410
Cow position: chr28:2422367-2422090 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 160-540
Cow position: chr28:23800917-23800509 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 265
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 14

Conread position: 160-540
Cow position: chr28:28635740-28635346 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 253
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 84

Conread position: 160-631
Cow position: chr28:12165846-12166360 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 348
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 231

Conread position: 160-645
Cow position: chr28:24993145-24992612 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 160-686
Cow position: chr28:5117554-5116987 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 341
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 71, 279

Conread position: 160-746
Cow position: chr28:18145077-18145682 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 396
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 351

Conread position: 160-786
Cow position: chr28:22090864-22091523 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 416
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 14

Conread position: 160-805
Cow position: chr28:21618161-21617493 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 421
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 216

Conread position: 160-806
Cow position: chr28:32764855-32764181 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 417
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 61

Conread position: 160-815
Cow position: chr28:30966863-30966159 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 464
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 235

Conread position: 160-823
Cow position: chr28:11501570-11502274 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 164

Conread position: 160-824
Cow position: chr28:24499701-24498991 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 48

Conread position: 160-830
Cow position: chr28:21569546-21568839 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 80

Conread position: 160-834
Cow position: chr28:3068531-3067822 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 187

Conread position: 160-834
Cow position: chr28:14492969-14492267 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 325

Conread position: 160-834
Cow position: chr28:15916869-15917594 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 9

Conread position: 160-834
Cow position: chr28:25070503-25069773 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 563

Conread position: 161-394
Cow position: chr28:10530068-10530324 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 161-803
Cow position: chr28:22580677-22580010 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 439
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 306

Conread position: 162-466
Cow position: chr28:12226864-12227192 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 7

Conread position: 162-781
Cow position: chr28:17744682-17745342 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 423
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 56, 226

Conread position: 163-824
Cow position: chr28:24301708-24302403 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 443
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 391

Conread position: 163-834
Cow position: chr28:13607086-13606372 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 346

Conread position: 164-808
Cow position: chr28:6473604-6474294 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 579

Conread position: 166-427
Cow position: chr28:13693131-13692840 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 167-512
Cow position: chr28:7981312-7981687 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 169-387
Cow position: chr28:22501082-22501305 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 171

Conread position: 169-834
Cow position: chr28:15054805-15054091 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 580

Conread position: 170-834
Cow position: chr28:34677566-34678262 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 163

Conread position: 172-410
Cow position: chr28:2123200-2122942 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 96

Conread position: 172-722
Cow position: chr28:5773052-5772471 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 391
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 52, 40

Conread position: 172-788
Cow position: chr28:21896927-21896259 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 169

Conread position: 180-540
Cow position: chr28:3188379-3188776 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 42, 253

Conread position: 183-794
Cow position: chr28:10162854-10162217 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 187

Conread position: 186-829
Cow position: chr28:3627645-3626952 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 322

Conread position: 186-834
Cow position: chr28:25850190-25849492 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 564

Conread position: 189-468
Cow position: chr28:4069575-4069272 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 36, 135

Conread position: 189-522
Cow position: chr28:10578467-10578836 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 190-644
Cow position: chr28:10642916-10643397 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 331
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 33, 233

Conread position: 201-788
Cow position: chr28:17392050-17391410 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 554

Conread position: 201-824
Cow position: chr28:15600158-15600793 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 95

Conread position: 201-825
Cow position: chr28:32785823-32786486 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 139

Conread position: 203-444
Cow position: chr28:13473225-13472952 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 208-793
Cow position: chr28:7744706-7744075 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 403

Conread position: 208-834
Cow position: chr28:6776402-6777072 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 536

Conread position: 208-834
Cow position: chr28:22254600-22255267 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 269

Conread position: 213-779
Cow position: chr28:10479304-10479902 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 260

Conread position: 215-769
Cow position: chr28:21104385-21104973 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 221-458
Cow position: chr28:14740984-14740743 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 68

Conread position: 221-834
Cow position: chr28:14512020-14511379 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 226-832
Cow position: chr28:4045774-4045153 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 393
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 40

Conread position: 227-466
Cow position: chr28:15497910-15498153 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 106, 26

Conread position: 229-807
Cow position: chr28:32277136-32276513 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 389
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 143

Conread position: 235-825
Cow position: chr28:20411324-20410682 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 243-768
Cow position: chr28:13323698-13323130 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 500

Conread position: 243-769
Cow position: chr28:10194040-10194609 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 500

Conread position: 248-635
Cow position: chr28:15687841-15687436 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 260
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 36

Conread position: 248-834
Cow position: chr28:4928904-4929519 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 115

Conread position: 258-834
Cow position: chr28:4457876-4457256 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 403
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 34, 484

Conread position: 267-693
Cow position: chr28:7784688-7785148 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 313
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 26, 369

Conread position: 271-784
Cow position: chr28:29473520-29472971 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 363
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 74, 300

Conread position: 286-802
Cow position: chr28:21767790-21768330 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 290-825
Cow position: chr28:12998187-12997625 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 319

Conread position: 290-831
Cow position: chr28:1024823-1025397 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 293

Conread position: 290-834
Cow position: chr28:15351614-15352186 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 372
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 49, 195

Conread position: 291-815
Cow position: chr28:24620355-24620894 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 361
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 184

Conread position: 293-834
Cow position: chr28:6230189-6230760 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 376
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 127

Conread position: 295-548
Cow position: chr28:15715476-15715204 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 46, 170

Conread position: 297-812
Cow position: chr28:14229483-14230000 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 343
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 18

Conread position: 299-829
Cow position: chr28:10326556-10325997 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 352
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 122

Conread position: 305-834
Cow position: chr28:6471946-6472506 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 18

Conread position: 311-834
Cow position: chr28:5312463-5311905 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 424

Conread position: 340-801
Cow position: chr28:1778015-1777526 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 328
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 93

Conread position: 340-832
Cow position: chr28:32730580-32731079 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 34

Conread position: 342-825
Cow position: chr28:3004065-3004581 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 7

Conread position: 345-803
Cow position: chr28:26563617-26563147 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 304
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 122

Conread position: 380-645
Cow position: chr28:8971485-8971202 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 67

Conread position: 421-685
Cow position: chr28:331534-331821 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 28

Conread position: 421-821
Cow position: chr28:16041298-16041708 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 93

Conread position: 421-825
Cow position: chr28:5572009-5571579 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 9, 110

Conread position: 421-825
Cow position: chr28:15589440-15589009 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 9, 44

Conread position: 421-829
Cow position: chr28:28929198-28928773 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 421-834
Cow position: chr28:7443103-7443538 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 301

Conread position: 421-834
Cow position: chr28:12216923-12217358 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 301

Conread position: 421-834
Cow position: chr28:15604983-15604542 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 307

Conread position: 421-834
Cow position: chr28:22229966-22230398 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 296

Conread position: 423-825
Cow position: chr28:28184756-28184325 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 272

Conread position: 430-825
Cow position: chr28:13880883-13880463 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 287
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 296

Conread position: 431-815
Cow position: chr28:7654278-7654668 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 259
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 109

Conread position: 434-598
Cow position: chr28:1837140-1836965 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 45, 94

Conread position: 435-825
Cow position: chr28:12047189-12047596 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 246

Conread position: 440-834
Cow position: chr28:30304665-30305077 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 288
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 53, 249

Conread position: 452-677
Cow position: chr28:30328812-30329046 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 222

Conread position: 476-834
Cow position: chr28:1197436-1197045 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 243

Conread position: 491-834
Cow position: chr28:1214547-1214899 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 48

Conread position: 491-834
Cow position: chr28:7829799-7829438 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 220

Conread position: 491-834
Cow position: chr28:12155134-12154775 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 194

Conread position: 491-834
Cow position: chr28:34583217-34582855 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 230

Conread position: 493-814
Cow position: chr28:24671085-24670745 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 223

Conread position: 498-834
Cow position: chr28:2662675-2663027 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 116

Conread position: 505-825
Cow position: chr28:2088843-2088514 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 30

Conread position: 505-825
Cow position: chr28:30533787-30534120 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 10, 32

Conread position: 505-828
Cow position: chr28:30369202-30368885 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 31

Conread position: 507-824
Cow position: chr28:5791245-5791573 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 8, 28

Conread position: 510-818
Cow position: chr28:979990-980317 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 134

Conread position: 521-785
Cow position: chr28:22553775-22553505 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 14

Conread position: 521-805
Cow position: chr28:17249334-17249621 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 13

Conread position: 527-779
Cow position: chr28:26717984-26717718 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 186

Conread position: 537-849
Cow position: chr28:25596141-25595820 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 170

Conread position: 539-831
Cow position: chr28:31848698-31848994 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 168

Conread position: 545-815
Cow position: chr28:32343886-32343612 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 38

Conread position: 568-829
Cow position: chr28:1164689-1164953 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 80, 41

Conread position: 569-788
Cow position: chr28:34880338-34880112 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 66, 135

Conread position: 569-804
Cow position: chr28:25762085-25761850 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 79, 129

Conread position: 569-825
Cow position: chr28:5569565-5569310 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 79, 136

Conread position: 569-832
Cow position: chr28:10590159-10590428 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 105

Conread position: 569-834
Cow position: chr28:3652440-3652178 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 78, 98

Conread position: 571-834
Cow position: chr28:3188832-3189100 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 75, 100

Conread position: 591-770
Cow position: chr28:32588119-32588303 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 114

Conread position: 591-834
Cow position: chr28:24592051-24591805 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 56, 114

Conread position: 599-808
Cow position: chr28:2414703-2414493 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 47, 10

Conread position: 601-834
Cow position: chr28:34606760-34606525 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 100

Conread position: 606-834
Cow position: chr28:1836908-1836674 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 37, 97

Conread position: 609-825
Cow position: chr28:12936249-12936471 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 62

Conread position: 621-834
Cow position: chr28:5336709-5336928 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 26, 79

Conread position: 624-787
Cow position: chr28:12227438-12227600 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 49

Conread position: 644-834
Cow position: chr28:25563528-25563339 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 123, 26

Conread position: 645-804
Cow position: chr28:5867594-5867436 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 645-834
Cow position: chr28:12170463-12170654 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 133, 50

Conread position: 649-824
Cow position: chr28:25796409-25796587 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 117, 15

Conread position: 666-802
Cow position: chr28:21767648-21767783 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 666-825
Cow position: chr28:7547833-7547675 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 666-834
Cow position: chr28:12407116-12407283 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 667-808
Cow position: chr28:22498401-22498263 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 671-846
Cow position: chr28:4376292-4376466 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 696-811
Cow position: chr28:10643421-10643537 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 704-824
Cow position: chr28:3012745-3012861 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 707-834
Cow position: chr28:22040352-22040477 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.