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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8021O16.3
        

               
Conread position:
               
10-387
               

               
Cow position:
               
chr4:45235288-45235698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
36-834
               

               
Cow position:
               
chr4:18267534-18266713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 687
               

               
Conread position:
               
65-644
               

               
Cow position:
               
chr4:26400217-26399606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
69-808
               

               
Cow position:
               
chr4:12605431-12606218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
801
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
73-223
               

               
Cow position:
               
chr4:43370362-43370515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
73-337
               

               
Cow position:
               
chr4:30004559-30004839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
73-358
               

               
Cow position:
               
chr4:54494334-54494013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
73-364
               

               
Cow position:
               
chr4:65464600-65464914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
73-365
               

               
Cow position:
               
chr4:488999-489321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr4:6547237-6547585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr4:23647337-23647671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr4:43476348-43476687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
73-393
               

               
Cow position:
               
chr4:68362428-68362082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
73-417
               

               
Cow position:
               
chr4:25352172-25352520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
73-446
               

               
Cow position:
               
chr4:28613314-28612921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
73-452
               

               
Cow position:
               
chr4:46526494-46526098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
73-453
               

               
Cow position:
               
chr4:24179026-24179455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
73-528
               

               
Cow position:
               
chr4:2601651-2601157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
73-528
               

               
Cow position:
               
chr4:11201314-11200813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
73-551
               

               
Cow position:
               
chr4:15802387-15802920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
73-580
               

               
Cow position:
               
chr4:4850793-4850225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
73-598
               

               
Cow position:
               
chr4:19957479-19956887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
73-614
               

               
Cow position:
               
chr4:33171591-33171002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
73-644
               

               
Cow position:
               
chr4:36755211-36754601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
73-727
               

               
Cow position:
               
chr4:2003148-2003820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
73-754
               

               
Cow position:
               
chr4:4085926-4086660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
73-766
               

               
Cow position:
               
chr4:16966856-16967591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
73-808
               

               
Cow position:
               
chr4:30287602-30286858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
73-822
               

               
Cow position:
               
chr4:65431673-65430914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr4:18812785-18813588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr4:26745953-26745142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr4:33020192-33021011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
73-834
               

               
Cow position:
               
chr4:33069390-33070220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
74-410
               

               
Cow position:
               
chr4:22236980-22237347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
74-456
               

               
Cow position:
               
chr4:43898446-43898867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
74-822
               

               
Cow position:
               
chr4:47752744-47751959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
74-825
               

               
Cow position:
               
chr4:17877408-17876599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
74-825
               

               
Cow position:
               
chr4:54931177-54931969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
74-834
               

               
Cow position:
               
chr4:5610576-5611378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
809
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
74-834
               

               
Cow position:
               
chr4:43316205-43317028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
75-746
               

               
Cow position:
               
chr4:962155-962877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
75-834
               

               
Cow position:
               
chr4:31561788-31562608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
76-387
               

               
Cow position:
               
chr4:37703757-37703415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
77-633
               

               
Cow position:
               
chr4:18845238-18844635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
77-825
               

               
Cow position:
               
chr4:38181179-38180396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
94-808
               

               
Cow position:
               
chr4:42863568-42862837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
96-819
               

               
Cow position:
               
chr4:19237481-19236706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
105-522
               

               
Cow position:
               
chr4:39458074-39457612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
119-411
               

               
Cow position:
               
chr4:31348779-31349095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
119-834
               

               
Cow position:
               
chr4:48030246-48029483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
120-312
               

               
Cow position:
               
chr4:14152512-14152322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
122-522
               

               
Cow position:
               
chr4:32249880-32249444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
123-457
               

               
Cow position:
               
chr4:22743770-22743408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
123-585
               

               
Cow position:
               
chr4:22850291-22850791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 443
               

               
Conread position:
               
123-778
               

               
Cow position:
               
chr4:1499708-1500393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 461
               

               
Conread position:
               
123-804
               

               
Cow position:
               
chr4:3252168-3252899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
139-337
               

               
Cow position:
               
chr4:24002553-24002763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
141-832
               

               
Cow position:
               
chr4:30508565-30507819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
141-835
               

               
Cow position:
               
chr4:66173960-66174698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
142-834
               

               
Cow position:
               
chr4:10044404-10045146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
143-356
               

               
Cow position:
               
chr4:14142680-14142455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
143-372
               

               
Cow position:
               
chr4:8377776-8378026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-375
               

               
Cow position:
               
chr4:19006856-19006603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr4:7139002-7139262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr4:29560165-29560425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr4:46585543-46585803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr4:18973856-18973593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-411
               

               
Cow position:
               
chr4:58485107-58485395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-433
               

               
Cow position:
               
chr4:11872503-11872806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
143-436
               

               
Cow position:
               
chr4:61066033-61065716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-445
               

               
Cow position:
               
chr4:22014060-22014389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-446
               

               
Cow position:
               
chr4:14684575-14684241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr4:12033701-12033367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-457
               

               
Cow position:
               
chr4:47269533-47269198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
8, 295
               

               
Conread position:
               
143-464
               

               
Cow position:
               
chr4:48152962-48153297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-548
               

               
Cow position:
               
chr4:33180936-33181366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
143-579
               

               
Cow position:
               
chr4:65816307-65816772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
143-590
               

               
Cow position:
               
chr4:30170995-30171491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-644
               

               
Cow position:
               
chr4:26874544-26875091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-645
               

               
Cow position:
               
chr4:15056167-15055624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-685
               

               
Cow position:
               
chr4:20616354-20616943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-714
               

               
Cow position:
               
chr4:11193325-11192695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-741
               

               
Cow position:
               
chr4:3849959-3849315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
143-765
               

               
Cow position:
               
chr4:60856124-60855450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-806
               

               
Cow position:
               
chr4:34713180-34712468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-815
               

               
Cow position:
               
chr4:42330367-42331081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
143-815
               

               
Cow position:
               
chr4:44901628-44900915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
143-819
               

               
Cow position:
               
chr4:27178188-27177464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-822
               

               
Cow position:
               
chr4:22317103-22316362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr4:10885001-10884269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr4:17235383-17234657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr4:17833485-17834217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-825
               

               
Cow position:
               
chr4:61242632-61241913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
143-829
               

               
Cow position:
               
chr4:58292094-58291368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
143-832
               

               
Cow position:
               
chr4:3475034-3474320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr4:1027862-1028599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr4:3070235-3069543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr4:3450162-3449417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr4:22905037-22904328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr4:29530095-29530836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr4:33496923-33496182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
143-834
               

               
Cow position:
               
chr4:44733980-44733247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
144-453
               

               
Cow position:
               
chr4:39421958-39421618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
144-534
               

               
Cow position:
               
chr4:22354313-22353900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
144-580
               

               
Cow position:
               
chr4:8769397-8768927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
144-627
               

               
Cow position:
               
chr4:21056587-21056088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
144-815
               

               
Cow position:
               
chr4:6167608-6168326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
144-819
               

               
Cow position:
               
chr4:4379737-4379027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
144-825
               

               
Cow position:
               
chr4:6630950-6631682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
144-830
               

               
Cow position:
               
chr4:27337574-27336839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
145-337
               

               
Cow position:
               
chr4:36892040-36891833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
145-451
               

               
Cow position:
               
chr4:14164148-14163811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
145-468
               

               
Cow position:
               
chr4:47774229-47774584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
145-522
               

               
Cow position:
               
chr4:67767781-67767371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
145-546
               

               
Cow position:
               
chr4:34223296-34222875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
145-579
               

               
Cow position:
               
chr4:68796066-68795597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
145-735
               

               
Cow position:
               
chr4:23150298-23150937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
145-761
               

               
Cow position:
               
chr4:25983642-25982976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 153
               

               
Conread position:
               
145-787
               

               
Cow position:
               
chr4:26548825-26548139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
145-829
               

               
Cow position:
               
chr4:55670602-55669871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
145-831
               

               
Cow position:
               
chr4:8649438-8648704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
145-834
               

               
Cow position:
               
chr4:606967-606232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
145-834
               

               
Cow position:
               
chr4:64874667-64875402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
146-382
               

               
Cow position:
               
chr4:49032046-49031792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
146-388
               

               
Cow position:
               
chr4:22841756-22841503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
146-645
               

               
Cow position:
               
chr4:64791304-64790793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
146-719
               

               
Cow position:
               
chr4:48497041-48496413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 606
               

               
Conread position:
               
146-825
               

               
Cow position:
               
chr4:25596123-25596855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 184
               

               
Conread position:
               
146-834
               

               
Cow position:
               
chr4:64039543-64038870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
147-381
               

               
Cow position:
               
chr4:43234872-43235120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-463
               

               
Cow position:
               
chr4:42480590-42480249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
147-522
               

               
Cow position:
               
chr4:43896135-43896554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-528
               

               
Cow position:
               
chr4:27997129-27996721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 219
               

               
Conread position:
               
147-537
               

               
Cow position:
               
chr4:61235789-61236210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 383
               

               
Conread position:
               
147-540
               

               
Cow position:
               
chr4:49745033-49744601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-542
               

               
Cow position:
               
chr4:2190936-2191367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
147-546
               

               
Cow position:
               
chr4:23494322-23493905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
12, 218
               

               
Conread position:
               
147-580
               

               
Cow position:
               
chr4:16642177-16641702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
147-598
               

               
Cow position:
               
chr4:41097329-41096841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 333
               

               
Conread position:
               
147-814
               

               
Cow position:
               
chr4:11100238-11100951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 278
               

               
Conread position:
               
147-825
               

               
Cow position:
               
chr4:23303996-23304711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:359244-358506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 431
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:2349389-2350095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:3284002-3284736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 590
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:27540025-27539290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:36025909-36026649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 608
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:36899738-36898998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 287
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:43884455-43883715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 573
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:54190126-54189412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 237
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:54757902-54758612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
147-834
               

               
Cow position:
               
chr4:57988105-57987365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 608
               

               
Conread position:
               
148-369
               

               
Cow position:
               
chr4:13139928-13140156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 113
               

               
Conread position:
               
148-374
               

               
Cow position:
               
chr4:5284478-5284729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
148-451
               

               
Cow position:
               
chr4:55954727-55954402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
148-548
               

               
Cow position:
               
chr4:46668013-46667584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
148-692
               

               
Cow position:
               
chr4:6034685-6035265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
148-735
               

               
Cow position:
               
chr4:3354585-3355216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 350
               

               
Conread position:
               
148-829
               

               
Cow position:
               
chr4:27287746-27288473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 359
               

               
Conread position:
               
148-834
               

               
Cow position:
               
chr4:67383625-67382908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
148-849
               

               
Cow position:
               
chr4:60625185-60625919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
150-377
               

               
Cow position:
               
chr4:21532226-21532468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
150-824
               

               
Cow position:
               
chr4:28835918-28835193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
150-834
               

               
Cow position:
               
chr4:43840624-43841351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
152-767
               

               
Cow position:
               
chr4:65581861-65581203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 78
               

               
Conread position:
               
153-801
               

               
Cow position:
               
chr4:2263355-2264057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 600
               

               
Conread position:
               
153-822
               

               
Cow position:
               
chr4:52696599-52695898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 89
               

               
Conread position:
               
154-261
               

               
Cow position:
               
chr4:49814607-49814717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
154-693
               

               
Cow position:
               
chr4:16832199-16832784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
5, 40
               

               
Conread position:
               
154-736
               

               
Cow position:
               
chr4:29034959-29034348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
155-408
               

               
Cow position:
               
chr4:51122388-51122112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
155-522
               

               
Cow position:
               
chr4:46529900-46530293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
67, 279
               

               
Conread position:
               
155-825
               

               
Cow position:
               
chr4:37786652-37785932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 323
               

               
Conread position:
               
158-293
               

               
Cow position:
               
chr4:19141368-19141223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-319
               

               
Cow position:
               
chr4:10055603-10055432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 154
               

               
Conread position:
               
158-369
               

               
Cow position:
               
chr4:28855460-28855227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-369
               

               
Cow position:
               
chr4:33146207-33145974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-369
               

               
Cow position:
               
chr4:38834764-38834997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-373
               

               
Cow position:
               
chr4:16859371-16859606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr4:120340-120586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr4:4923922-4924168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr4:26131508-26131262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr4:27655437-27655191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr4:53316687-53316933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
158-408
               

               
Cow position:
               
chr4:3800939-3801212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-409
               

               
Cow position:
               
chr4:61400007-61400280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
158-410
               

               
Cow position:
               
chr4:30573308-30573029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr4:30474730-30474402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr4:45114041-45114372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr4:64156078-64155751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-466
               

               
Cow position:
               
chr4:7806518-7806178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
158-466
               

               
Cow position:
               
chr4:61817054-61817393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
64, 329
               

               
Conread position:
               
158-467
               

               
Cow position:
               
chr4:5882825-5882484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
158-467
               

               
Cow position:
               
chr4:6446110-6445770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-523
               

               
Cow position:
               
chr4:533640-533241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-526
               

               
Cow position:
               
chr4:63195233-63195632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
158-533
               

               
Cow position:
               
chr4:1007242-1006833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-534
               

               
Cow position:
               
chr4:3129205-3128794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 322
               

               
Conread position:
               
158-540
               

               
Cow position:
               
chr4:652377-651957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-540
               

               
Cow position:
               
chr4:5441311-5441731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-540
               

               
Cow position:
               
chr4:54161717-54162133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
158-540
               

               
Cow position:
               
chr4:60579780-60580200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
158-555
               

               
Cow position:
               
chr4:62570041-62569620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 258
               

               
Conread position:
               
158-580
               

               
Cow position:
               
chr4:162430-161966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 269
               

               
Conread position:
               
158-580
               

               
Cow position:
               
chr4:10403365-10403831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-580
               

               
Cow position:
               
chr4:10553577-10553132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
158-633
               

               
Cow position:
               
chr4:60224528-60225045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
158-645
               

               
Cow position:
               
chr4:47116186-47115650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-645
               

               
Cow position:
               
chr4:62453638-62454172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 343
               

               
Conread position:
               
158-645
               

               
Cow position:
               
chr4:62962013-62962544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
158-685
               

               
Cow position:
               
chr4:15618044-15617463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
158-692
               

               
Cow position:
               
chr4:2226415-2227002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
158-714
               

               
Cow position:
               
chr4:24140225-24139613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 331
               

               
Conread position:
               
158-729
               

               
Cow position:
               
chr4:18331436-18330812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 589
               

               
Conread position:
               
158-734
               

               
Cow position:
               
chr4:65198451-65199080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 589
               

               
Conread position:
               
158-737
               

               
Cow position:
               
chr4:10122756-10122128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 467
               

               
Conread position:
               
158-772
               

               
Cow position:
               
chr4:35144195-35144862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 335
               

               
Conread position:
               
158-782
               

               
Cow position:
               
chr4:20630762-20630117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
158-796
               

               
Cow position:
               
chr4:38584227-38583540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
158-818
               

               
Cow position:
               
chr4:46492284-46491588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
158-819
               

               
Cow position:
               
chr4:41962246-41961533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 594
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr4:8678151-8677432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 329
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr4:15873301-15874005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
158-825
               

               
Cow position:
               
chr4:44777841-44778563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 597
               

               
Conread position:
               
158-829
               

               
Cow position:
               
chr4:60651932-60651219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 154
               

               
Conread position:
               
158-830
               

               
Cow position:
               
chr4:40218188-40217464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:4185517-4184805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:6265882-6266592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:9041296-9040567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:9357588-9356859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:10424827-10424113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:16062600-16061917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
389, 453
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:17033151-17033880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:17775413-17776140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 189
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:17821880-17821151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:20656714-20657439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 216
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:21342423-21341694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 595
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:27292565-27293264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:47264127-47263397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 596
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:48733026-48732298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 594
               

               
Conread position:
               
158-834
               

               
Cow position:
               
chr4:67394558-67393848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
159-387
               

               
Cow position:
               
chr4:50978098-50977855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
159-438
               

               
Cow position:
               
chr4:23508545-23508237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
159-532
               

               
Cow position:
               
chr4:11918603-11919009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
159-549
               

               
Cow position:
               
chr4:52648695-52648290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
159-580
               

               
Cow position:
               
chr4:38564345-38564810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
159-644
               

               
Cow position:
               
chr4:1368725-1369239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
159-786
               

               
Cow position:
               
chr4:1927286-1927966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 594
               

               
Conread position:
               
159-832
               

               
Cow position:
               
chr4:67600330-67601043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 101
               

               
Conread position:
               
159-834
               

               
Cow position:
               
chr4:18335598-18336336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 598
               

               
Conread position:
               
160-293
               

               
Cow position:
               
chr4:12588941-12588798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
160-337
               

               
Cow position:
               
chr4:13979387-13979195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 80
               

               
Conread position:
               
160-357
               

               
Cow position:
               
chr4:15462916-15463130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
160-387
               

               
Cow position:
               
chr4:7583565-7583320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
160-387
               

               
Cow position:
               
chr4:16735658-16735411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
160-410
               

               
Cow position:
               
chr4:67652088-67652361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
160-537
               

               
Cow position:
               
chr4:45499502-45499117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 111
               

               
Conread position:
               
160-580
               

               
Cow position:
               
chr4:2140405-2139946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
160-580
               

               
Cow position:
               
chr4:54695684-54696147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 309
               

               
Conread position:
               
160-635
               

               
Cow position:
               
chr4:20790135-20789622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 367
               

               
Conread position:
               
160-636
               

               
Cow position:
               
chr4:24020776-24021301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 226
               

               
Conread position:
               
160-693
               

               
Cow position:
               
chr4:10613860-10614415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
160-757
               

               
Cow position:
               
chr4:9713061-9712432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 138
               

               
Conread position:
               
160-765
               

               
Cow position:
               
chr4:59355560-59356206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
61, 473
               

               
Conread position:
               
160-807
               

               
Cow position:
               
chr4:11104362-11105030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
160-807
               

               
Cow position:
               
chr4:25972283-25971613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 284
               

               
Conread position:
               
160-824
               

               
Cow position:
               
chr4:8674076-8673368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 257
               

               
Conread position:
               
160-824
               

               
Cow position:
               
chr4:11107743-11108446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
160-832
               

               
Cow position:
               
chr4:1935171-1935902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 356
               

               
Conread position:
               
160-832
               

               
Cow position:
               
chr4:48503189-48502479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 372
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr4:4419394-4418670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 593
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr4:28173524-28174241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
160-834
               

               
Cow position:
               
chr4:46711256-46711975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 561
               

               
Conread position:
               
160-835
               

               
Cow position:
               
chr4:7214442-7215156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
161-382
               

               
Cow position:
               
chr4:14543089-14543329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
161-834
               

               
Cow position:
               
chr4:7779744-7779021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
162-387
               

               
Cow position:
               
chr4:2122001-2122222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
119, 61
               

               
Conread position:
               
162-477
               

               
Cow position:
               
chr4:33399125-33399474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
162-811
               

               
Cow position:
               
chr4:9821482-9820793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 268
               

               
Conread position:
               
163-541
               

               
Cow position:
               
chr4:25578921-25578529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
163-834
               

               
Cow position:
               
chr4:12237904-12238606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 185
               

               
Conread position:
               
164-540
               

               
Cow position:
               
chr4:61625241-61625633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 193
               

               
Conread position:
               
165-452
               

               
Cow position:
               
chr4:34384072-34384383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
59, 173
               

               
Conread position:
               
165-683
               

               
Cow position:
               
chr4:1061535-1062067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 124
               

               
Conread position:
               
166-548
               

               
Cow position:
               
chr4:58688557-58688974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
169-453
               

               
Cow position:
               
chr4:8700477-8700162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
169-811
               

               
Cow position:
               
chr4:65919008-65918334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
169-815
               

               
Cow position:
               
chr4:35929811-35929129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
170-824
               

               
Cow position:
               
chr4:5874405-5873738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 123
               

               
Conread position:
               
171-834
               

               
Cow position:
               
chr4:54147096-54147787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 128
               

               
Conread position:
               
174-644
               

               
Cow position:
               
chr4:3961565-3962072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
180-825
               

               
Cow position:
               
chr4:18005042-18004345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 572
               

               
Conread position:
               
182-834
               

               
Cow position:
               
chr4:62906696-62907400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 570
               

               
Conread position:
               
186-645
               

               
Cow position:
               
chr4:47949017-47949524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
186-726
               

               
Cow position:
               
chr4:59783994-59783404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
37, 173
               

               
Conread position:
               
189-468
               

               
Cow position:
               
chr4:68386844-68386532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
189-579
               

               
Cow position:
               
chr4:61449835-61449396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
189-834
               

               
Cow position:
               
chr4:16363519-16362823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 530
               

               
Conread position:
               
190-830
               

               
Cow position:
               
chr4:26468541-26467873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
201-410
               

               
Cow position:
               
chr4:509459-509237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
208-652
               

               
Cow position:
               
chr4:17751650-17752127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 133
               

               
Conread position:
               
208-825
               

               
Cow position:
               
chr4:20243448-20242786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 537
               

               
Conread position:
               
208-834
               

               
Cow position:
               
chr4:3170572-3169902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 271
               

               
Conread position:
               
208-834
               

               
Cow position:
               
chr4:21297493-21298160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 533
               

               
Conread position:
               
216-627
               

               
Cow position:
               
chr4:59118829-59119265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 339
               

               
Conread position:
               
218-788
               

               
Cow position:
               
chr4:10540964-10541564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
64, 247
               

               
Conread position:
               
221-541
               

               
Cow position:
               
chr4:11025940-11026286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
15, 179
               

               
Conread position:
               
221-795
               

               
Cow position:
               
chr4:34700280-34700886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
221-822
               

               
Cow position:
               
chr4:23451747-23452380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 263
               

               
Conread position:
               
221-834
               

               
Cow position:
               
chr4:6487089-6487746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 308
               

               
Conread position:
               
222-571
               

               
Cow position:
               
chr4:7048793-7049170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 162
               

               
Conread position:
               
223-751
               

               
Cow position:
               
chr4:61272314-61272853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
224-717
               

               
Cow position:
               
chr4:36812285-36811759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
227-761
               

               
Cow position:
               
chr4:3971654-3971083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 489
               

               
Conread position:
               
230-877
               

               
Cow position:
               
chr4:12841210-12840526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
235-803
               

               
Cow position:
               
chr4:26885660-26886271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 508
               

               
Conread position:
               
235-825
               

               
Cow position:
               
chr4:6862979-6863601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
235-825
               

               
Cow position:
               
chr4:10822619-10823236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 67
               

               
Conread position:
               
241-834
               

               
Cow position:
               
chr4:5914580-5913973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
53, 226
               

               
Conread position:
               
244-794
               

               
Cow position:
               
chr4:44646493-44647089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
35, 416
               

               
Conread position:
               
248-572
               

               
Cow position:
               
chr4:19141244-19140902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 322
               

               
Conread position:
               
248-578
               

               
Cow position:
               
chr4:22724183-22723836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 337
               

               
Conread position:
               
248-635
               

               
Cow position:
               
chr4:16605937-16606323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
249-811
               

               
Cow position:
               
chr4:65842656-65843245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
253-645
               

               
Cow position:
               
chr4:17473319-17472900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 179
               

               
Conread position:
               
253-800
               

               
Cow position:
               
chr4:23525828-23525242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 400
               

               
Conread position:
               
253-828
               

               
Cow position:
               
chr4:25878660-25878042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
254-669
               

               
Cow position:
               
chr4:54973293-54972842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 445
               

               
Conread position:
               
258-548
               

               
Cow position:
               
chr4:34166815-34167111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
258-834
               

               
Cow position:
               
chr4:55509620-55510213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
268-769
               

               
Cow position:
               
chr4:33564179-33563642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
269-710
               

               
Cow position:
               
chr4:52086378-52085902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 462
               

               
Conread position:
               
273-772
               

               
Cow position:
               
chr4:25822803-25823328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 139
               

               
Conread position:
               
273-818
               

               
Cow position:
               
chr4:44593185-44593738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
277-796
               

               
Cow position:
               
chr4:66900819-66900287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 141
               

               
Conread position:
               
279-802
               

               
Cow position:
               
chr4:45653963-45654521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 451
               

               
Conread position:
               
285-831
               

               
Cow position:
               
chr4:1239227-1239794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
289-721
               

               
Cow position:
               
chr4:41038026-41037562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 439
               

               
Conread position:
               
289-833
               

               
Cow position:
               
chr4:22073898-22074450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 189
               

               
Conread position:
               
290-627
               

               
Cow position:
               
chr4:20091300-20090944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 271
               

               
Conread position:
               
290-759
               

               
Cow position:
               
chr4:38153100-38153606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 447
               

               
Conread position:
               
290-788
               

               
Cow position:
               
chr4:10135005-10135534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 444
               

               
Conread position:
               
290-834
               

               
Cow position:
               
chr4:35868387-35867838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
291-596
               

               
Cow position:
               
chr4:21364267-21363952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 151
               

               
Conread position:
               
291-655
               

               
Cow position:
               
chr4:6806506-6806111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
291-692
               

               
Cow position:
               
chr4:33628833-33629270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
291-738
               

               
Cow position:
               
chr4:15463233-15463708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
48, 400
               

               
Conread position:
               
291-834
               

               
Cow position:
               
chr4:54810648-54811240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 539
               

               
Conread position:
               
292-834
               

               
Cow position:
               
chr4:40697269-40697846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 443
               

               
Conread position:
               
292-834
               

               
Cow position:
               
chr4:41472632-41473209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 124
               

               
Conread position:
               
295-819
               

               
Cow position:
               
chr4:41957952-41957398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 435
               

               
Conread position:
               
297-834
               

               
Cow position:
               
chr4:27882081-27881513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 434
               

               
Conread position:
               
299-825
               

               
Cow position:
               
chr4:65890972-65890428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 153
               

               
Conread position:
               
304-510
               

               
Cow position:
               
chr4:4126920-4126701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
307-834
               

               
Cow position:
               
chr4:6000251-6000822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 224
               

               
Conread position:
               
311-778
               

               
Cow position:
               
chr4:33831251-33831753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 424
               

               
Conread position:
               
311-800
               

               
Cow position:
               
chr4:14919215-14918713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 130
               

               
Conread position:
               
316-834
               

               
Cow position:
               
chr4:34175808-34176371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 427
               

               
Conread position:
               
319-806
               

               
Cow position:
               
chr4:38909671-38909159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 327
               

               
Conread position:
               
323-742
               

               
Cow position:
               
chr4:13254826-13254385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
328-834
               

               
Cow position:
               
chr4:45268287-45268791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
336, 0
               

               
Conread position:
               
332-748
               

               
Cow position:
               
chr4:12455116-12454682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
336-678
               

               
Cow position:
               
chr4:41130997-41131371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
336-834
               

               
Cow position:
               
chr4:5578672-5579171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 189
               

               
Conread position:
               
336-834
               

               
Cow position:
               
chr4:31484832-31485361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 395
               

               
Conread position:
               
336-856
               

               
Cow position:
               
chr4:30540517-30541066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 389
               

               
Conread position:
               
339-830
               

               
Cow position:
               
chr4:4673432-4673952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 124
               

               
Conread position:
               
341-522
               

               
Cow position:
               
chr4:25192739-25192925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 115
               

               
Conread position:
               
348-825
               

               
Cow position:
               
chr4:32962-33455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
348-834
               

               
Cow position:
               
chr4:21843382-21843897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 383
               

               
Conread position:
               
351-815
               

               
Cow position:
               
chr4:1187223-1187714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
354-834
               

               
Cow position:
               
chr4:1047132-1047630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 318
               

               
Conread position:
               
369-834
               

               
Cow position:
               
chr4:27518260-27518751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 354
               

               
Conread position:
               
371-799
               

               
Cow position:
               
chr4:50977638-50977207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 150
               

               
Conread position:
               
374-833
               

               
Cow position:
               
chr4:39840823-39840336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
374-834
               

               
Cow position:
               
chr4:18096505-18096991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
380-825
               

               
Cow position:
               
chr4:19206797-19206327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 243
               

               
Conread position:
               
386-822
               

               
Cow position:
               
chr4:32215248-32214787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 339
               

               
Conread position:
               
409-724
               

               
Cow position:
               
chr4:54098691-54099023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
413-580
               

               
Cow position:
               
chr4:1462686-1462863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
421-720
               

               
Cow position:
               
chr4:19107996-19108319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 299
               

               
Conread position:
               
421-815
               

               
Cow position:
               
chr4:41190113-41190520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr4:6548091-6547656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 301
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr4:20027465-20027901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 301
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr4:27892129-27891694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 301
               

               
Conread position:
               
421-834
               

               
Cow position:
               
chr4:47055370-47055805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 207
               

               
Conread position:
               
422-811
               

               
Cow position:
               
chr4:18301187-18301592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
423-831
               

               
Cow position:
               
chr4:55273207-55272778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
425-789
               

               
Cow position:
               
chr4:105829-106204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 153
               

               
Conread position:
               
426-818
               

               
Cow position:
               
chr4:45954728-45954323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
430-826
               

               
Cow position:
               
chr4:36669619-36669220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 276
               

               
Conread position:
               
446-831
               

               
Cow position:
               
chr4:5047492-5047906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 281
               

               
Conread position:
               
447-787
               

               
Cow position:
               
chr4:14737069-14736713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 153
               

               
Conread position:
               
456-834
               

               
Cow position:
               
chr4:18099884-18100284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 265
               

               
Conread position:
               
468-782
               

               
Cow position:
               
chr4:68386330-68386020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
488-834
               

               
Cow position:
               
chr4:37703241-37702877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 196
               

               
Conread position:
               
491-741
               

               
Cow position:
               
chr4:19737009-19736740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 216
               

               
Conread position:
               
491-819
               

               
Cow position:
               
chr4:44957428-44957775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 232
               

               
Conread position:
               
491-825
               

               
Cow position:
               
chr4:29604491-29604844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 228
               

               
Conread position:
               
491-834
               

               
Cow position:
               
chr4:3128799-3128436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 226
               

               
Conread position:
               
492-834
               

               
Cow position:
               
chr4:9004750-9005111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 227
               

               
Conread position:
               
493-771
               

               
Cow position:
               
chr4:13140442-13140730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
499-833
               

               
Cow position:
               
chr4:42103401-42103067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
505-825
               

               
Cow position:
               
chr4:61595750-61596070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
505-867
               

               
Cow position:
               
chr4:43761327-43760958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
506-828
               

               
Cow position:
               
chr4:23646249-23646579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
512-802
               

               
Cow position:
               
chr4:68108622-68108923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 197
               

               
Conread position:
               
513-834
               

               
Cow position:
               
chr4:58882436-58882762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
521-829
               

               
Cow position:
               
chr4:43896766-43897080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
522-834
               

               
Cow position:
               
chr4:41976710-41977024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
534-771
               

               
Cow position:
               
chr4:42405145-42405390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
537-763
               

               
Cow position:
               
chr4:4463877-4463641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 173
               

               
Conread position:
               
538-834
               

               
Cow position:
               
chr4:19254648-19254349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 165
               

               
Conread position:
               
545-819
               

               
Cow position:
               
chr4:43899211-43899482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
545-834
               

               
Cow position:
               
chr4:64800031-64799740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
548-768
               

               
Cow position:
               
chr4:16833215-16832994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
569-831
               

               
Cow position:
               
chr4:20184378-20184122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
569-834
               

               
Cow position:
               
chr4:63001028-63000758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
571-834
               

               
Cow position:
               
chr4:55520159-55519888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
579-808
               

               
Cow position:
               
chr4:23437887-23438118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
590-825
               

               
Cow position:
               
chr4:8935486-8935244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
591-825
               

               
Cow position:
               
chr4:8768622-8768387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 111
               

               
Conread position:
               
591-834
               

               
Cow position:
               
chr4:532914-532666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
591-834
               

               
Cow position:
               
chr4:30474303-30474055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
592-825
               

               
Cow position:
               
chr4:14141970-14141739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
594-819
               

               
Cow position:
               
chr4:15814634-15814864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
594-819
               

               
Cow position:
               
chr4:21362383-21362151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 112
               

               
Conread position:
               
600-834
               

               
Cow position:
               
chr4:1436627-1436872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
608-815
               

               
Cow position:
               
chr4:9796736-9796947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
609-825
               

               
Cow position:
               
chr4:50761530-50761744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
610-771
               

               
Cow position:
               
chr4:1356090-1356255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
610-834
               

               
Cow position:
               
chr4:13464662-13464434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
645-824
               

               
Cow position:
               
chr4:5486580-5486758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
645-825
               

               
Cow position:
               
chr4:54972274-54972096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
645-834
               

               
Cow position:
               
chr4:30578536-30578348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
646-822
               

               
Cow position:
               
chr4:62557760-62557935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
661-822
               

               
Cow position:
               
chr4:12583829-12583990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
666-834
               

               
Cow position:
               
chr4:16606934-16606768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
668-834
               

               
Cow position:
               
chr4:56013828-56013993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
671-825
               

               
Cow position:
               
chr4:14818146-14818300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
675-825
               

               
Cow position:
               
chr4:16734839-16734988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
696-834
               

               
Cow position:
               
chr4:10121664-10121802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
698-834
               

               
Cow position:
               
chr4:2227220-2227356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
698-834
               

               
Cow position:
               
chr4:25129534-25129398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
701-834
               

               
Cow position:
               
chr4:49744530-49744397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
702-825
               

               
Cow position:
               
chr4:16641365-16641242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
708-834
               

               
Cow position:
               
chr4:161911-161785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.