Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 120-716
Cow position:
Alignm length: 629
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 43

Conread position: 125-601
Cow position:
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 269

Conread position: 125-697
Cow position:
Alignm length: 596
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 263

Conread position: 125-697
Cow position:
Alignm length: 592
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 271

Conread position: 125-720
Cow position:
Alignm length: 620
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 99

Conread position: 125-720
Cow position:
Alignm length: 626
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 135-496
Cow position:
Alignm length: 379
Alignm identity: 251
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 28

Conread position: 135-509
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-526
Cow position:
Alignm length: 406
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 89

Conread position: 135-715
Cow position:
Alignm length: 608
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-716
Cow position:
Alignm length: 607
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 84

Conread position: 135-720
Cow position:
Alignm length: 610
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 84

Conread position: 135-720
Cow position:
Alignm length: 609
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 209

Conread position: 143-696
Cow position:
Alignm length: 576
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 119

Conread position: 149-417
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 48

Conread position: 156-697
Cow position:
Alignm length: 562
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 15

Conread position: 158-708
Cow position:
Alignm length: 583
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 85

Conread position: 161-644
Cow position:
Alignm length: 494
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 56

Conread position: 161-693
Cow position:
Alignm length: 565
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 233

Conread position: 161-720
Cow position:
Alignm length: 577
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 148

Conread position: 164-511
Cow position:
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 225

Conread position: 164-697
Cow position:
Alignm length: 550
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 200

Conread position: 164-697
Cow position:
Alignm length: 547
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 128

Conread position: 164-697
Cow position:
Alignm length: 559
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 111

Conread position: 164-716
Cow position:
Alignm length: 587
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 295

Conread position: 164-719
Cow position:
Alignm length: 578
Alignm identity: 373
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 34, 85

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 593
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 230

Conread position: 164-720
Cow position:
Alignm length: 578
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 165-504
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 196

Conread position: 168-457
Cow position:
Alignm length: 296
Alignm identity: 190
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 137

Conread position: 168-715
Cow position:
Alignm length: 578
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 63

Conread position: 171-471
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 30, 43

Conread position: 171-471
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 217

Conread position: 171-638
Cow position:
Alignm length: 484
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 570
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 581
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 580
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 572
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 575
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 578
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 570
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 574
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 43

Conread position: 171-720
Cow position:
Alignm length: 573
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 570
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 177-624
Cow position:
Alignm length: 472
Alignm identity: 299
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 102

Conread position: 177-712
Cow position:
Alignm length: 562
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 18

Conread position: 178-504
Cow position:
Alignm length: 332
Alignm identity: 212
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 35

Conread position: 178-707
Cow position:
Alignm length: 544
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 103

Conread position: 178-712
Cow position:
Alignm length: 558
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 135

Conread position: 180-720
Cow position:
Alignm length: 562
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 66

Conread position: 181-405
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 161

Conread position: 181-459
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 208

Conread position: 181-480
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 61

Conread position: 181-510
Cow position:
Alignm length: 343
Alignm identity: 222
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 171

Conread position: 181-669
Cow position:
Alignm length: 506
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 34

Conread position: 181-715
Cow position:
Alignm length: 564
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 181-720
Cow position:
Alignm length: 551
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 213

Conread position: 181-720
Cow position:
Alignm length: 558
Alignm identity: 370
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 39

Conread position: 181-725
Cow position:
Alignm length: 554
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 77

Conread position: 185-719
Cow position:
Alignm length: 559
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 80

Conread position: 191-697
Cow position:
Alignm length: 531
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 36

Conread position: 195-710
Cow position:
Alignm length: 529
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 18

Conread position: 196-710
Cow position:
Alignm length: 531
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 118

Conread position: 196-719
Cow position:
Alignm length: 541
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 196-720
Cow position:
Alignm length: 543
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 196-721
Cow position:
Alignm length: 549
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 50

Conread position: 200-716
Cow position:
Alignm length: 531
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 34

Conread position: 204-556
Cow position:
Alignm length: 362
Alignm identity: 243
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 17, 7

Conread position: 206-480
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 5

Conread position: 212-583
Cow position:
Alignm length: 381
Alignm identity: 253
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 25

Conread position: 239-710
Cow position:
Alignm length: 493
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 148

Conread position: 240-700
Cow position:
Alignm length: 480
Alignm identity: 319
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 152

Conread position: 242-710
Cow position:
Alignm length: 487
Alignm identity: 321
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 46

Conread position: 246-710
Cow position:
Alignm length: 479
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 92

Conread position: 254-646
Cow position:
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 34

Conread position: 260-711
Cow position:
Alignm length: 473
Alignm identity: 316
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 49, 101

Conread position: 265-705
Cow position:
Alignm length: 456
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 129

Conread position: 266-721
Cow position:
Alignm length: 478
Alignm identity: 310
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 51

Conread position: 268-708
Cow position:
Alignm length: 462
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 50

Conread position: 272-720
Cow position:
Alignm length: 461
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 274-710
Cow position:
Alignm length: 454
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 112

Conread position: 283-470
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 103

Conread position: 311-569
Cow position:
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 78

Conread position: 311-656
Cow position:
Alignm length: 350
Alignm identity: 226
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 77, 83

Conread position: 311-710
Cow position:
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 72

Conread position: 311-710
Cow position:
Alignm length: 413
Alignm identity: 262
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 72

Conread position: 313-719
Cow position:
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 75

Conread position: 319-710
Cow position:
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 69

Conread position: 319-719
Cow position:
Alignm length: 411
Alignm identity: 274
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 69

Conread position: 324-720
Cow position:
Alignm length: 409
Alignm identity: 276
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 72, 35

Conread position: 328-728
Cow position:
Alignm length: 413
Alignm identity: 272
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 33

Conread position: 335-697
Cow position:
Alignm length: 379
Alignm identity: 256
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 61, 53

Conread position: 339-712
Cow position:
Alignm length: 386
Alignm identity: 255
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 49

Conread position: 343-629
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 78, 46

Conread position: 343-638
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 45

Conread position: 343-646
Cow position:
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 45

Conread position: 343-719
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 344-646
Cow position:
Alignm length: 310
Alignm identity: 222
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 52, 40

Conread position: 346-593
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 42

Conread position: 369-720
Cow position:
Alignm length: 365
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 19

Conread position: 375-723
Cow position:
Alignm length: 363
Alignm identity: 237
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 21, 59

Conread position: 385-719
Cow position:
Alignm length: 349
Alignm identity: 237
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 35, 81

Conread position: 391-720
Cow position:
Alignm length: 333
Alignm identity: 216
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 65

Conread position: 401-646
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 14, 61

Conread position: 401-720
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 31

Conread position: 401-731
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 165, 27

Conread position: 402-721
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 96, 59

Conread position: 410-646
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 56

Conread position: 417-645
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 8, 44

Conread position: 417-721
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 44

Conread position: 421-720
Cow position:
Alignm length: 312
Alignm identity: 216
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 145, 32

Conread position: 426-716
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 37

Conread position: 428-553
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 432-570
Cow position:
Alignm length: 139
Alignm identity: 118
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 449-697
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 117, 11

Conread position: 459-716
Cow position:
Alignm length: 270
Alignm identity: 181
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 54

Conread position: 463-722
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 168

Conread position: 515-720
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 208

Show alignments to all cow chromosomes.