Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 3-710
Cow position:
Alignm length: 734
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 119-720
Cow position:
Alignm length: 638
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 100

Conread position: 124-720
Cow position:
Alignm length: 625
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 125-707
Cow position:
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 125-720
Cow position:
Alignm length: 623
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 58

Conread position: 125-720
Cow position:
Alignm length: 619
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 126-520
Cow position:
Alignm length: 406
Alignm identity: 254
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 17

Conread position: 135-385
Cow position:
Alignm length: 263
Alignm identity: 178
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 84

Conread position: 135-507
Cow position:
Alignm length: 393
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 28

Conread position: 135-560
Cow position:
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 123

Conread position: 135-569
Cow position:
Alignm length: 462
Alignm identity: 309
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 616
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 83

Conread position: 135-720
Cow position:
Alignm length: 615
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 150-526
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 270, 73

Conread position: 156-447
Cow position:
Alignm length: 306
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 118

Conread position: 158-529
Cow position:
Alignm length: 383
Alignm identity: 251
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 43, 56

Conread position: 158-569
Cow position:
Alignm length: 420
Alignm identity: 281
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 43, 60

Conread position: 158-582
Cow position:
Alignm length: 436
Alignm identity: 287
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 55

Conread position: 158-589
Cow position:
Alignm length: 440
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 5

Conread position: 158-628
Cow position:
Alignm length: 485
Alignm identity: 315
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 56

Conread position: 158-646
Cow position:
Alignm length: 504
Alignm identity: 312
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 103

Conread position: 158-702
Cow position:
Alignm length: 562
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 37

Conread position: 158-705
Cow position:
Alignm length: 567
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 138

Conread position: 158-708
Cow position:
Alignm length: 572
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 142

Conread position: 158-716
Cow position:
Alignm length: 575
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 135

Conread position: 158-716
Cow position:
Alignm length: 574
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 100

Conread position: 158-720
Cow position:
Alignm length: 586
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 161-603
Cow position:
Alignm length: 451
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 30

Conread position: 161-697
Cow position:
Alignm length: 552
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 54

Conread position: 161-720
Cow position:
Alignm length: 576
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 162-488
Cow position:
Alignm length: 336
Alignm identity: 233
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 38, 178

Conread position: 162-659
Cow position:
Alignm length: 512
Alignm identity: 326
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 45

Conread position: 164-404
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 55

Conread position: 164-431
Cow position:
Alignm length: 277
Alignm identity: 196
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 37, 90

Conread position: 164-477
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 118

Conread position: 164-510
Cow position:
Alignm length: 357
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 50

Conread position: 164-688
Cow position:
Alignm length: 543
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 104

Conread position: 164-696
Cow position:
Alignm length: 552
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 12

Conread position: 164-697
Cow position:
Alignm length: 553
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-697
Cow position:
Alignm length: 555
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 226

Conread position: 164-697
Cow position:
Alignm length: 562
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 225

Conread position: 164-697
Cow position:
Alignm length: 557
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 164-715
Cow position:
Alignm length: 572
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 225

Conread position: 164-716
Cow position:
Alignm length: 575
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 230

Conread position: 164-720
Cow position:
Alignm length: 598
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 230

Conread position: 164-720
Cow position:
Alignm length: 584
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 230

Conread position: 164-720
Cow position:
Alignm length: 579
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 89

Conread position: 164-720
Cow position:
Alignm length: 579
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 164-720
Cow position:
Alignm length: 577
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 164-720
Cow position:
Alignm length: 579
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 569
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 66

Conread position: 164-728
Cow position:
Alignm length: 585
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 168-538
Cow position:
Alignm length: 377
Alignm identity: 250
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 30

Conread position: 171-504
Cow position:
Alignm length: 344
Alignm identity: 241
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 30, 43

Conread position: 171-557
Cow position:
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 218

Conread position: 171-586
Cow position:
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-616
Cow position:
Alignm length: 465
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-710
Cow position:
Alignm length: 574
Alignm identity: 371
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 47

Conread position: 171-710
Cow position:
Alignm length: 570
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 129

Conread position: 171-720
Cow position:
Alignm length: 570
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 570
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 569
Alignm identity: 360
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 217

Conread position: 171-720
Cow position:
Alignm length: 573
Alignm identity: 368
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 169

Conread position: 178-539
Cow position:
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 103

Conread position: 178-591
Cow position:
Alignm length: 432
Alignm identity: 271
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 16

Conread position: 178-640
Cow position:
Alignm length: 469
Alignm identity: 292
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 53

Conread position: 178-644
Cow position:
Alignm length: 479
Alignm identity: 311
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 22

Conread position: 178-720
Cow position:
Alignm length: 570
Alignm identity: 367
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 21, 210

Conread position: 179-720
Cow position:
Alignm length: 563
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 181-487
Cow position:
Alignm length: 316
Alignm identity: 211
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 166

Conread position: 181-707
Cow position:
Alignm length: 555
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 6

Conread position: 181-710
Cow position:
Alignm length: 547
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 11

Conread position: 181-712
Cow position:
Alignm length: 549
Alignm identity: 348
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 93

Conread position: 181-716
Cow position:
Alignm length: 554
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 26

Conread position: 182-707
Cow position:
Alignm length: 541
Alignm identity: 346
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 61

Conread position: 184-447
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 63

Conread position: 186-625
Cow position:
Alignm length: 453
Alignm identity: 292
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 6

Conread position: 196-471
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 113, 190

Conread position: 196-568
Cow position:
Alignm length: 383
Alignm identity: 249
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 15

Conread position: 196-589
Cow position:
Alignm length: 404
Alignm identity: 269
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 194

Conread position: 196-646
Cow position:
Alignm length: 478
Alignm identity: 325
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 69

Conread position: 196-707
Cow position:
Alignm length: 535
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 21

Conread position: 196-716
Cow position:
Alignm length: 555
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 189

Conread position: 196-720
Cow position:
Alignm length: 560
Alignm identity: 368
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 113, 141

Conread position: 196-720
Cow position:
Alignm length: 543
Alignm identity: 349
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 173

Conread position: 198-538
Cow position:
Alignm length: 346
Alignm identity: 220
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 106

Conread position: 198-712
Cow position:
Alignm length: 525
Alignm identity: 329
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 51

Conread position: 198-713
Cow position:
Alignm length: 526
Alignm identity: 344
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 136, 67

Conread position: 199-720
Cow position:
Alignm length: 544
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 12

Conread position: 203-710
Cow position:
Alignm length: 526
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 20

Conread position: 204-707
Cow position:
Alignm length: 525
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 47

Conread position: 204-720
Cow position:
Alignm length: 543
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 211-646
Cow position:
Alignm length: 448
Alignm identity: 302
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 6, 21

Conread position: 219-720
Cow position:
Alignm length: 534
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 173

Conread position: 227-720
Cow position:
Alignm length: 506
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 49

Conread position: 232-644
Cow position:
Alignm length: 423
Alignm identity: 273
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 103

Conread position: 238-720
Cow position:
Alignm length: 504
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 148

Conread position: 239-646
Cow position:
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 151

Conread position: 259-459
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 137, 53

Conread position: 259-697
Cow position:
Alignm length: 455
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 6

Conread position: 261-601
Cow position:
Alignm length: 348
Alignm identity: 222
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 123

Conread position: 267-720
Cow position:
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 124

Conread position: 276-721
Cow position:
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 33

Conread position: 284-528
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 108

Conread position: 292-644
Cow position:
Alignm length: 359
Alignm identity: 228
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 140, 21

Conread position: 311-596
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 84, 79

Conread position: 317-503
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 101, 71

Conread position: 318-553
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 78, 9

Conread position: 319-589
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 70

Conread position: 319-610
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 69

Conread position: 319-710
Cow position:
Alignm length: 403
Alignm identity: 269
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 94, 69

Conread position: 321-615
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 21

Conread position: 323-719
Cow position:
Alignm length: 410
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 58

Conread position: 329-603
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 59

Conread position: 331-634
Cow position:
Alignm length: 313
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 57

Conread position: 343-645
Cow position:
Alignm length: 318
Alignm identity: 210
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 48

Conread position: 344-635
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 44

Conread position: 344-719
Cow position:
Alignm length: 387
Alignm identity: 261
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 74, 46

Conread position: 345-721
Cow position:
Alignm length: 393
Alignm identity: 255
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 143, 44

Conread position: 345-721
Cow position:
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 347-697
Cow position:
Alignm length: 369
Alignm identity: 245
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 48, 42

Conread position: 348-720
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 41

Conread position: 358-720
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 30

Conread position: 361-719
Cow position:
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 27

Conread position: 386-706
Cow position:
Alignm length: 332
Alignm identity: 218
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 64

Conread position: 386-715
Cow position:
Alignm length: 354
Alignm identity: 236
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 79

Conread position: 391-716
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 60

Conread position: 400-647
Cow position:
Alignm length: 258
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 65

Conread position: 402-710
Cow position:
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 62

Conread position: 402-721
Cow position:
Alignm length: 331
Alignm identity: 213
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 63

Conread position: 416-639
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 21

Conread position: 417-710
Cow position:
Alignm length: 301
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 30

Conread position: 419-710
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 150, 42

Conread position: 422-668
Cow position:
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 148, 41

Conread position: 422-718
Cow position:
Alignm length: 312
Alignm identity: 212
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 140, 38

Conread position: 428-646
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 80, 32

Conread position: 435-721
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 25

Conread position: 438-708
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 128, 25

Conread position: 450-721
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 13

Conread position: 456-720
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 270

Conread position: 459-701
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 134, 59

Conread position: 464-707
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 41, 245

Conread position: 468-591
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 469-646
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 101, 0

Conread position: 475-639
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 141

Conread position: 476-710
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 99, 212

Conread position: 479-720
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 33

Conread position: 540-715
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 37

Show alignments to all cow chromosomes.