Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022G06.3
        

               Conread position:
               119-720
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               125-503
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               135-716
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               137-503
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 223
               

               Conread position:
               156-589
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 116
               

               Conread position:
               156-706
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 153
               

               Conread position:
               158-496
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 78
               

               Conread position:
               158-515
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 142
               

               Conread position:
               158-534
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 95
               

               Conread position:
               158-618
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               312
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               31, 123
               

               Conread position:
               158-710
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               161-418
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 90
               

               Conread position:
               161-720
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               164-469
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               164-694
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 231
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 121
               

               Conread position:
               164-712
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 95
               

               Conread position:
               164-715
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 95
               

               Conread position:
               164-716
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 180
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 230
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 180
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 50
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 225
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 229
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 224
               

               Conread position:
               164-728
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               380
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               165-639
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               171-471
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               171-471
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-485
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               30, 220
               

               Conread position:
               171-588
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-639
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 221
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 303
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               177-697
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 39
               

               Conread position:
               177-716
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               181-491
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               16, 79
               

               Conread position:
               181-502
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 85
               

               Conread position:
               181-588
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               181-636
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 137
               

               Conread position:
               181-646
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 222
               

               Conread position:
               181-708
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               346
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               181-721
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               184-630
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               184-720
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 208
               

               Conread position:
               196-611
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               196-716
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               361
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 115
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 69
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 195
               

               Conread position:
               199-710
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               345
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               197, 17
               

               Conread position:
               199-716
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 159
               

               Conread position:
               199-716
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 150
               

               Conread position:
               201-503
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               194, 22
               

               Conread position:
               213-429
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               253-636
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               274
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               60, 92
               

               Conread position:
               267-684
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 81
               

               Conread position:
               271-641
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               273-590
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               41, 29
               

               Conread position:
               283-720
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 103
               

               Conread position:
               284-710
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               290-646
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               290-713
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               296-668
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               296-720
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               311-625
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               113, 144
               

               Conread position:
               311-707
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 78
               

               Conread position:
               313-568
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               83, 69
               

               Conread position:
               313-698
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 76
               

               Conread position:
               314-569
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               84, 24
               

               Conread position:
               319-603
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               321-716
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               277
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               35, 87
               

               Conread position:
               340-715
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               343-728
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               344-650
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               52, 44
               

               Conread position:
               346-668
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               346-712
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               351-576
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               351-721
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               367-705
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               372-707
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               372-720
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               374-639
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               375-720
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               381-701
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               400-687
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               410-615
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               410-697
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               160, 15
               

               Conread position:
               420-720
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               422-720
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               165, 38
               

               Conread position:
               436-641
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               132, 26
               

               Conread position:
               459-626
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 53
               

               Conread position:
               463-718
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               485-697
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               17, 212
               
Show alignments to all cow chromosomes.