Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 115-661
Cow position:
Alignm length: 569
Alignm identity: 372
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 79

Conread position: 119-362
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 100

Conread position: 124-503
Cow position:
Alignm length: 393
Alignm identity: 265
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 19, 241

Conread position: 125-504
Cow position:
Alignm length: 396
Alignm identity: 269
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 18, 165

Conread position: 125-697
Cow position:
Alignm length: 594
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 46

Conread position: 125-697
Cow position:
Alignm length: 590
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 220

Conread position: 125-710
Cow position:
Alignm length: 610
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 135-588
Cow position:
Alignm length: 481
Alignm identity: 310
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 217

Conread position: 135-695
Cow position:
Alignm length: 587
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 135-697
Cow position:
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 135

Conread position: 135-720
Cow position:
Alignm length: 611
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 614
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 615
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-720
Cow position:
Alignm length: 621
Alignm identity: 396
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 28

Conread position: 149-640
Cow position:
Alignm length: 515
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 40

Conread position: 150-504
Cow position:
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 13

Conread position: 154-610
Cow position:
Alignm length: 471
Alignm identity: 295
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 159, 7

Conread position: 158-363
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 158-710
Cow position:
Alignm length: 577
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 35

Conread position: 158-710
Cow position:
Alignm length: 572
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 230

Conread position: 158-710
Cow position:
Alignm length: 572
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 100

Conread position: 158-715
Cow position:
Alignm length: 584
Alignm identity: 376
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 40, 134

Conread position: 158-716
Cow position:
Alignm length: 578
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 161

Conread position: 161-565
Cow position:
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 204

Conread position: 161-693
Cow position:
Alignm length: 551
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 81

Conread position: 161-715
Cow position:
Alignm length: 573
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 67

Conread position: 161-720
Cow position:
Alignm length: 582
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 233

Conread position: 163-720
Cow position:
Alignm length: 580
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 134

Conread position: 164-520
Cow position:
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 62

Conread position: 164-632
Cow position:
Alignm length: 484
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 227

Conread position: 164-640
Cow position:
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 227

Conread position: 164-694
Cow position:
Alignm length: 551
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 169

Conread position: 164-697
Cow position:
Alignm length: 550
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 164-697
Cow position:
Alignm length: 554
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 94

Conread position: 164-697
Cow position:
Alignm length: 551
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 230

Conread position: 164-697
Cow position:
Alignm length: 548
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 223

Conread position: 164-697
Cow position:
Alignm length: 550
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 222

Conread position: 164-698
Cow position:
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 140

Conread position: 164-706
Cow position:
Alignm length: 565
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 224

Conread position: 164-709
Cow position:
Alignm length: 564
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-710
Cow position:
Alignm length: 580
Alignm identity: 375
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 37, 17

Conread position: 164-718
Cow position:
Alignm length: 573
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 77

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 230

Conread position: 164-720
Cow position:
Alignm length: 578
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 173

Conread position: 164-720
Cow position:
Alignm length: 578
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 96

Conread position: 164-720
Cow position:
Alignm length: 590
Alignm identity: 392
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 180

Conread position: 164-720
Cow position:
Alignm length: 589
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 226

Conread position: 164-720
Cow position:
Alignm length: 577
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 53

Conread position: 164-720
Cow position:
Alignm length: 577
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 226

Conread position: 171-494
Cow position:
Alignm length: 334
Alignm identity: 229
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 22, 43

Conread position: 171-589
Cow position:
Alignm length: 440
Alignm identity: 296
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 30, 222

Conread position: 171-640
Cow position:
Alignm length: 496
Alignm identity: 327
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 173

Conread position: 171-716
Cow position:
Alignm length: 575
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 48

Conread position: 171-720
Cow position:
Alignm length: 573
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 572
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 172-720
Cow position:
Alignm length: 561
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 62

Conread position: 172-720
Cow position:
Alignm length: 569
Alignm identity: 326
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 42

Conread position: 178-708
Cow position:
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 56

Conread position: 178-721
Cow position:
Alignm length: 562
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 55

Conread position: 179-716
Cow position:
Alignm length: 556
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 219

Conread position: 180-697
Cow position:
Alignm length: 541
Alignm identity: 344
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 207

Conread position: 181-407
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 183

Conread position: 181-508
Cow position:
Alignm length: 346
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 83

Conread position: 181-547
Cow position:
Alignm length: 373
Alignm identity: 244
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 91

Conread position: 181-697
Cow position:
Alignm length: 545
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 221

Conread position: 181-702
Cow position:
Alignm length: 539
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 36

Conread position: 181-709
Cow position:
Alignm length: 533
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 41

Conread position: 181-710
Cow position:
Alignm length: 567
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 66

Conread position: 182-531
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 16, 35

Conread position: 183-687
Cow position:
Alignm length: 515
Alignm identity: 331
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 28, 15

Conread position: 188-716
Cow position:
Alignm length: 549
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 30

Conread position: 189-534
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 206, 7

Conread position: 189-640
Cow position:
Alignm length: 476
Alignm identity: 316
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 102, 7

Conread position: 196-447
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 27

Conread position: 196-470
Cow position:
Alignm length: 281
Alignm identity: 196
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 116, 54

Conread position: 196-506
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 113, 72

Conread position: 196-646
Cow position:
Alignm length: 458
Alignm identity: 298
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 202, 113

Conread position: 196-677
Cow position:
Alignm length: 512
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 79

Conread position: 196-697
Cow position:
Alignm length: 520
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 63

Conread position: 196-710
Cow position:
Alignm length: 528
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 154

Conread position: 196-715
Cow position:
Alignm length: 547
Alignm identity: 355
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 31

Conread position: 196-715
Cow position:
Alignm length: 541
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 93

Conread position: 196-716
Cow position:
Alignm length: 533
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 190

Conread position: 196-720
Cow position:
Alignm length: 554
Alignm identity: 355
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 21, 15

Conread position: 199-537
Cow position:
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 192

Conread position: 199-720
Cow position:
Alignm length: 544
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 84

Conread position: 227-721
Cow position:
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 158

Conread position: 230-708
Cow position:
Alignm length: 493
Alignm identity: 299
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 75, 26

Conread position: 233-708
Cow position:
Alignm length: 494
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 24

Conread position: 251-688
Cow position:
Alignm length: 466
Alignm identity: 308
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 58, 141

Conread position: 260-636
Cow position:
Alignm length: 395
Alignm identity: 268
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 51, 5

Conread position: 264-719
Cow position:
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 97

Conread position: 272-646
Cow position:
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 121

Conread position: 283-507
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 108

Conread position: 283-720
Cow position:
Alignm length: 454
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 108

Conread position: 290-599
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 101

Conread position: 307-615
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 28

Conread position: 311-707
Cow position:
Alignm length: 408
Alignm identity: 269
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 85, 77

Conread position: 312-583
Cow position:
Alignm length: 276
Alignm identity: 179
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 76

Conread position: 312-710
Cow position:
Alignm length: 410
Alignm identity: 261
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 76

Conread position: 312-720
Cow position:
Alignm length: 426
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 71

Conread position: 317-656
Cow position:
Alignm length: 345
Alignm identity: 224
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 28

Conread position: 318-634
Cow position:
Alignm length: 325
Alignm identity: 209
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 62

Conread position: 320-522
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 138

Conread position: 322-695
Cow position:
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 66

Conread position: 328-719
Cow position:
Alignm length: 407
Alignm identity: 278
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 61

Conread position: 333-721
Cow position:
Alignm length: 403
Alignm identity: 261
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 36

Conread position: 338-640
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 160, 54

Conread position: 343-647
Cow position:
Alignm length: 309
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 23

Conread position: 343-682
Cow position:
Alignm length: 351
Alignm identity: 236
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 53, 45

Conread position: 343-710
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 346-669
Cow position:
Alignm length: 339
Alignm identity: 194
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 37

Conread position: 347-635
Cow position:
Alignm length: 294
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 31

Conread position: 354-720
Cow position:
Alignm length: 381
Alignm identity: 261
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 64, 34

Conread position: 372-710
Cow position:
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 384-646
Cow position:
Alignm length: 270
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 79

Conread position: 398-715
Cow position:
Alignm length: 326
Alignm identity: 212
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 58

Conread position: 401-646
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 64

Conread position: 403-720
Cow position:
Alignm length: 332
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 34

Conread position: 410-712
Cow position:
Alignm length: 313
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 34

Conread position: 417-691
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 93, 46

Conread position: 417-710
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 21

Conread position: 419-720
Cow position:
Alignm length: 308
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 41

Conread position: 420-720
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 151, 43

Conread position: 424-710
Cow position:
Alignm length: 299
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 36

Conread position: 435-720
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 76, 25

Conread position: 453-716
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 114, 35

Conread position: 475-720
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 95, 141

Conread position: 486-715
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 58

Conread position: 515-720
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 206

Show alignments to all cow chromosomes.