Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 122-720
Cow position:
Alignm length: 633
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 19

Conread position: 125-538
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 223

Conread position: 125-697
Cow position:
Alignm length: 599
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 269

Conread position: 125-707
Cow position:
Alignm length: 615
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 224

Conread position: 125-709
Cow position:
Alignm length: 610
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 127

Conread position: 125-720
Cow position:
Alignm length: 620
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 142

Conread position: 125-720
Cow position:
Alignm length: 621
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 217

Conread position: 135-484
Cow position:
Alignm length: 368
Alignm identity: 248
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 8, 28

Conread position: 135-510
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 8, 28

Conread position: 135-640
Cow position:
Alignm length: 527
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-669
Cow position:
Alignm length: 574
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 210

Conread position: 135-697
Cow position:
Alignm length: 585
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 8

Conread position: 135-707
Cow position:
Alignm length: 594
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 107

Conread position: 135-720
Cow position:
Alignm length: 615
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 136-720
Cow position:
Alignm length: 607
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 254

Conread position: 138-507
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 80

Conread position: 150-477
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 13

Conread position: 157-522
Cow position:
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 102

Conread position: 157-728
Cow position:
Alignm length: 581
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 7

Conread position: 158-432
Cow position:
Alignm length: 287
Alignm identity: 210
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 40, 237

Conread position: 158-710
Cow position:
Alignm length: 560
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 158-722
Cow position:
Alignm length: 584
Alignm identity: 380
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 59

Conread position: 161-540
Cow position:
Alignm length: 387
Alignm identity: 251
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 19

Conread position: 164-356
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 164-394
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 226

Conread position: 164-501
Cow position:
Alignm length: 345
Alignm identity: 233
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 61

Conread position: 164-537
Cow position:
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 118

Conread position: 164-588
Cow position:
Alignm length: 436
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 164-627
Cow position:
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 103

Conread position: 164-647
Cow position:
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-697
Cow position:
Alignm length: 552
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 230

Conread position: 164-697
Cow position:
Alignm length: 566
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 114

Conread position: 164-697
Cow position:
Alignm length: 555
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-697
Cow position:
Alignm length: 549
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-710
Cow position:
Alignm length: 567
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 164-716
Cow position:
Alignm length: 580
Alignm identity: 376
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 66

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 180

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 578
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 574
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 178

Conread position: 164-720
Cow position:
Alignm length: 577
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 111

Conread position: 164-720
Cow position:
Alignm length: 577
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 51

Conread position: 164-720
Cow position:
Alignm length: 577
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 194

Conread position: 165-710
Cow position:
Alignm length: 564
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 224

Conread position: 166-407
Cow position:
Alignm length: 242
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 166-691
Cow position:
Alignm length: 553
Alignm identity: 361
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 21, 11

Conread position: 168-437
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 83

Conread position: 171-507
Cow position:
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 572
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 571
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 575
Alignm identity: 375
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 30, 218

Conread position: 171-720
Cow position:
Alignm length: 571
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 173-582
Cow position:
Alignm length: 429
Alignm identity: 284
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 27, 100

Conread position: 173-634
Cow position:
Alignm length: 471
Alignm identity: 305
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 50, 41

Conread position: 179-478
Cow position:
Alignm length: 309
Alignm identity: 202
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 126

Conread position: 179-636
Cow position:
Alignm length: 475
Alignm identity: 316
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 35, 47

Conread position: 179-704
Cow position:
Alignm length: 547
Alignm identity: 353
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 35, 53

Conread position: 181-487
Cow position:
Alignm length: 316
Alignm identity: 218
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 104

Conread position: 181-500
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 210

Conread position: 181-698
Cow position:
Alignm length: 534
Alignm identity: 331
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 179

Conread position: 181-707
Cow position:
Alignm length: 550
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 6

Conread position: 184-615
Cow position:
Alignm length: 446
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 187-553
Cow position:
Alignm length: 373
Alignm identity: 240
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 13, 31

Conread position: 196-402
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 193

Conread position: 196-485
Cow position:
Alignm length: 295
Alignm identity: 192
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 182

Conread position: 196-504
Cow position:
Alignm length: 316
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 15

Conread position: 196-608
Cow position:
Alignm length: 428
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 185

Conread position: 196-631
Cow position:
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 62

Conread position: 196-697
Cow position:
Alignm length: 522
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 192

Conread position: 196-697
Cow position:
Alignm length: 515
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 54

Conread position: 196-719
Cow position:
Alignm length: 545
Alignm identity: 354
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 120, 56

Conread position: 196-720
Cow position:
Alignm length: 541
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 83

Conread position: 201-510
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 185

Conread position: 211-721
Cow position:
Alignm length: 545
Alignm identity: 361
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 5

Conread position: 222-569
Cow position:
Alignm length: 353
Alignm identity: 227
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 6

Conread position: 223-534
Cow position:
Alignm length: 322
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 172

Conread position: 223-716
Cow position:
Alignm length: 521
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 20

Conread position: 227-544
Cow position:
Alignm length: 323
Alignm identity: 227
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 82, 38

Conread position: 239-697
Cow position:
Alignm length: 473
Alignm identity: 306
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 146

Conread position: 241-646
Cow position:
Alignm length: 413
Alignm identity: 273
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 68

Conread position: 245-720
Cow position:
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 146

Conread position: 259-666
Cow position:
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 127

Conread position: 260-715
Cow position:
Alignm length: 474
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 129

Conread position: 271-692
Cow position:
Alignm length: 432
Alignm identity: 277
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 13

Conread position: 290-715
Cow position:
Alignm length: 444
Alignm identity: 297
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 19, 101

Conread position: 311-641
Cow position:
Alignm length: 341
Alignm identity: 219
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 85

Conread position: 313-705
Cow position:
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 71

Conread position: 317-633
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 78, 71

Conread position: 319-708
Cow position:
Alignm length: 402
Alignm identity: 268
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 77, 70

Conread position: 319-712
Cow position:
Alignm length: 404
Alignm identity: 273
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 79, 49

Conread position: 320-687
Cow position:
Alignm length: 379
Alignm identity: 256
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 75, 62

Conread position: 321-710
Cow position:
Alignm length: 397
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 69

Conread position: 322-589
Cow position:
Alignm length: 274
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 62

Conread position: 323-697
Cow position:
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 65

Conread position: 329-720
Cow position:
Alignm length: 400
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 55

Conread position: 343-635
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 16

Conread position: 343-694
Cow position:
Alignm length: 361
Alignm identity: 245
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 46

Conread position: 344-632
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 52, 38

Conread position: 344-716
Cow position:
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 345-682
Cow position:
Alignm length: 360
Alignm identity: 245
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 44

Conread position: 351-720
Cow position:
Alignm length: 382
Alignm identity: 257
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 37

Conread position: 352-644
Cow position:
Alignm length: 301
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 37

Conread position: 358-697
Cow position:
Alignm length: 360
Alignm identity: 251
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 30

Conread position: 358-720
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 397-682
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 59

Conread position: 397-691
Cow position:
Alignm length: 296
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 193, 64

Conread position: 400-721
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 62

Conread position: 400-721
Cow position:
Alignm length: 340
Alignm identity: 229
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 62

Conread position: 403-716
Cow position:
Alignm length: 325
Alignm identity: 224
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 15, 53

Conread position: 406-536
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 56

Conread position: 441-631
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 5

Conread position: 456-721
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 238

Conread position: 459-710
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 162

Conread position: 464-716
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 29

Conread position: 475-716
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 26

Show alignments to all cow chromosomes.