Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 3-675
Cow position:
Alignm length: 690
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 118-720
Cow position:
Alignm length: 630
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 45

Conread position: 125-697
Cow position:
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 269

Conread position: 125-697
Cow position:
Alignm length: 590
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 125-716
Cow position:
Alignm length: 615
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 266

Conread position: 125-720
Cow position:
Alignm length: 621
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 274

Conread position: 125-720
Cow position:
Alignm length: 626
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 93

Conread position: 135-640
Cow position:
Alignm length: 531
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 135-696
Cow position:
Alignm length: 586
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 135-720
Cow position:
Alignm length: 614
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 136-720
Cow position:
Alignm length: 626
Alignm identity: 410
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 7, 83

Conread position: 136-720
Cow position:
Alignm length: 615
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 158-630
Cow position:
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 132

Conread position: 158-710
Cow position:
Alignm length: 571
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 75

Conread position: 158-716
Cow position:
Alignm length: 582
Alignm identity: 374
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 92

Conread position: 158-721
Cow position:
Alignm length: 587
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 134

Conread position: 164-456
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 180

Conread position: 164-577
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 164-647
Cow position:
Alignm length: 515
Alignm identity: 344
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 37, 56

Conread position: 164-697
Cow position:
Alignm length: 558
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 175

Conread position: 164-697
Cow position:
Alignm length: 563
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 211

Conread position: 164-697
Cow position:
Alignm length: 554
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 230

Conread position: 164-707
Cow position:
Alignm length: 563
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 186

Conread position: 164-709
Cow position:
Alignm length: 566
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 225

Conread position: 164-720
Cow position:
Alignm length: 574
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 164-720
Cow position:
Alignm length: 576
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 197

Conread position: 164-720
Cow position:
Alignm length: 580
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 31

Conread position: 164-720
Cow position:
Alignm length: 589
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 164-728
Cow position:
Alignm length: 595
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 165-367
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 65

Conread position: 171-615
Cow position:
Alignm length: 462
Alignm identity: 272
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 30, 43

Conread position: 171-710
Cow position:
Alignm length: 556
Alignm identity: 364
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 49

Conread position: 176-718
Cow position:
Alignm length: 565
Alignm identity: 373
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 108

Conread position: 178-720
Cow position:
Alignm length: 551
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 67

Conread position: 180-510
Cow position:
Alignm length: 341
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 54

Conread position: 181-449
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 53

Conread position: 181-551
Cow position:
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 85

Conread position: 181-720
Cow position:
Alignm length: 560
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 166

Conread position: 183-646
Cow position:
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 36

Conread position: 192-720
Cow position:
Alignm length: 536
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 151

Conread position: 194-710
Cow position:
Alignm length: 533
Alignm identity: 347
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 5

Conread position: 195-720
Cow position:
Alignm length: 556
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 95

Conread position: 196-707
Cow position:
Alignm length: 542
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 190

Conread position: 196-716
Cow position:
Alignm length: 538
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 106

Conread position: 196-719
Cow position:
Alignm length: 547
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 196-720
Cow position:
Alignm length: 547
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 196-720
Cow position:
Alignm length: 550
Alignm identity: 365
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 108

Conread position: 196-720
Cow position:
Alignm length: 543
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 190

Conread position: 196-720
Cow position:
Alignm length: 551
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 58

Conread position: 196-720
Cow position:
Alignm length: 545
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 54

Conread position: 200-471
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 11

Conread position: 202-687
Cow position:
Alignm length: 504
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 46

Conread position: 223-543
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 8

Conread position: 225-569
Cow position:
Alignm length: 350
Alignm identity: 223
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 75

Conread position: 229-720
Cow position:
Alignm length: 522
Alignm identity: 342
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 25

Conread position: 237-694
Cow position:
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 6

Conread position: 242-563
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 79, 33

Conread position: 244-719
Cow position:
Alignm length: 492
Alignm identity: 322
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 44, 35

Conread position: 246-712
Cow position:
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 66

Conread position: 259-707
Cow position:
Alignm length: 463
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 6

Conread position: 265-710
Cow position:
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 123

Conread position: 269-720
Cow position:
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 124

Conread position: 272-710
Cow position:
Alignm length: 453
Alignm identity: 294
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 37, 86

Conread position: 272-720
Cow position:
Alignm length: 478
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 9

Conread position: 289-697
Cow position:
Alignm length: 422
Alignm identity: 283
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 64, 24

Conread position: 294-711
Cow position:
Alignm length: 425
Alignm identity: 283
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 205, 20

Conread position: 319-692
Cow position:
Alignm length: 390
Alignm identity: 271
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 68, 75

Conread position: 319-706
Cow position:
Alignm length: 404
Alignm identity: 275
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 23

Conread position: 334-716
Cow position:
Alignm length: 398
Alignm identity: 268
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 7, 49

Conread position: 347-615
Cow position:
Alignm length: 276
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 41

Conread position: 347-683
Cow position:
Alignm length: 344
Alignm identity: 224
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 35

Conread position: 351-720
Cow position:
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 361-716
Cow position:
Alignm length: 363
Alignm identity: 236
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 35, 27

Conread position: 376-721
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 40, 16

Conread position: 405-609
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 413-706
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 151, 41

Conread position: 459-609
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 38

Show alignments to all cow chromosomes.