Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022G06.3
        

               Conread position:
               9-710
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 6
               

               Conread position:
               125-504
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 140
               

               Conread position:
               125-621
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 269
               

               Conread position:
               135-569
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 28
               

               Conread position:
               138-720
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               158-438
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               151, 38
               

               Conread position:
               158-503
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               158-688
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 102
               

               Conread position:
               158-706
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 148
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               360
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               41, 59
               

               Conread position:
               158-720
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               161-637
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 66
               

               Conread position:
               161-710
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               163-719
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               355
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               125, 50
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 119
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 91
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 230
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 213
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               164-706
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               356
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               98, 75
               

               Conread position:
               164-716
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 231
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 58
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 304
               

               Conread position:
               168-536
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               171-716
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               352
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               178-534
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 136
               

               Conread position:
               179-707
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               357
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               21, 74
               

               Conread position:
               181-697
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 183
               

               Conread position:
               181-710
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               188-710
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 7
               

               Conread position:
               196-385
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               196-475
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               115, 195
               

               Conread position:
               196-509
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 179
               

               Conread position:
               196-644
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 266
               

               Conread position:
               196-697
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 195
               

               Conread position:
               198-716
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 30
               

               Conread position:
               201-707
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 27
               

               Conread position:
               201-720
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               355
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               195, 108
               

               Conread position:
               204-712
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               345
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               206-630
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 180
               

               Conread position:
               231-706
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               7, 35
               

               Conread position:
               232-698
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               253-655
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               134, 146
               

               Conread position:
               265-721
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               302
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               129, 34
               

               Conread position:
               268-693
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               271-712
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               278-645
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               311-661
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               311-707
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               85, 71
               

               Conread position:
               311-710
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               313-571
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               313-646
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 70
               

               Conread position:
               318-645
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 71
               

               Conread position:
               319-644
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               324-707
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 105
               

               Conread position:
               331-685
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 10
               

               Conread position:
               343-720
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 46
               

               Conread position:
               348-707
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               351-557
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               352-720
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               44, 36
               

               Conread position:
               376-647
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               384-582
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               401-716
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               407-710
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               413-697
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               143, 5
               

               Conread position:
               418-720
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               443-637
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               455-710
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               474-637
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               476-720
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               90, 236
               

               Conread position:
               551-710
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               20, 115
               
Show alignments to all cow chromosomes.