Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022G06.3
        

               Conread position:
               119-710
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 6
               

               Conread position:
               122-561
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               259, 34
               

               Conread position:
               125-696
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               125-697
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 259
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               146-710
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 238
               

               Conread position:
               158-499
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 152
               

               Conread position:
               158-542
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 231
               

               Conread position:
               158-583
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 159
               

               Conread position:
               161-719
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               370
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               148, 56
               

               Conread position:
               164-523
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               44, 230
               

               Conread position:
               164-621
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 228
               

               Conread position:
               164-695
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 47
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 225
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 120
               

               Conread position:
               164-698
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 197
               

               Conread position:
               164-707
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 197
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 230
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 91
               

               Conread position:
               165-646
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 58
               

               Conread position:
               167-432
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 222
               

               Conread position:
               171-646
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-716
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-716
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               368
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               385
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               178-554
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               23, 208
               

               Conread position:
               178-716
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 218
               

               Conread position:
               179-720
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               368
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               181-447
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               181-710
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 163
               

               Conread position:
               181-726
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               189-710
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 7
               

               Conread position:
               195-693
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               196-503
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               196-700
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               341
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 21
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 190
               

               Conread position:
               199-719
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               358
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               108, 94
               

               Conread position:
               217-475
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               234-504
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 8
               

               Conread position:
               271-720
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 115
               

               Conread position:
               285-646
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               25, 103
               

               Conread position:
               290-634
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               105, 13
               

               Conread position:
               292-697
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               292-720
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               311-488
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               312-691
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               317-707
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               324-597
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               332-523
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               338-569
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               343-639
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               343-684
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               347-550
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               350-721
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               361-637
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               35, 28
               

               Conread position:
               361-720
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 23
               

               Conread position:
               374-692
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               401-710
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               405-680
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               417-710
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               203, 37
               

               Conread position:
               423-712
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               148, 30
               

               Conread position:
               435-713
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               437-719
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               456-720
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 75
               

               Conread position:
               461-712
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               180, 109
               

               Conread position:
               471-697
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 115
               

               Conread position:
               475-696
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               
Show alignments to all cow chromosomes.