Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022G06.3
        

               Conread position:
               88-605
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               309
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               121, 129
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 141
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 262
               

               Conread position:
               158-371
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               158-391
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               151, 43
               

               Conread position:
               158-510
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               43, 189
               

               Conread position:
               158-558
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 120
               

               Conread position:
               158-569
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 43
               

               Conread position:
               158-588
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 230
               

               Conread position:
               158-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 152
               

               Conread position:
               160-636
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 234
               

               Conread position:
               161-646
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               161-715
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               397
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               161-716
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               164-469
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 197
               

               Conread position:
               164-547
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 227
               

               Conread position:
               164-549
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               164-581
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 138
               

               Conread position:
               164-669
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 140
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 272
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 189
               

               Conread position:
               164-712
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 75
               

               Conread position:
               164-716
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               164-716
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 230
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 225
               

               Conread position:
               168-667
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 230
               

               Conread position:
               171-631
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-718
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               178-715
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               337
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 113
               

               Conread position:
               180-700
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               181-641
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 30
               

               Conread position:
               181-720
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 208
               

               Conread position:
               184-641
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               306
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               21, 119
               

               Conread position:
               184-712
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               187-720
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               188-682
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 175
               

               Conread position:
               189-412
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 7
               

               Conread position:
               195-720
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               196-495
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               113, 74
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 171
               

               Conread position:
               240-710
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 64
               

               Conread position:
               241-694
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               312
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               179, 73
               

               Conread position:
               278-640
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               292-716
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               319-719
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               321-615
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               74, 61
               

               Conread position:
               327-710
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               344-697
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               345-644
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               350-646
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               356-720
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               42, 15
               

               Conread position:
               362-719
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               378-707
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               417-720
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               132, 43
               

               Conread position:
               418-720
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               130, 45
               

               Conread position:
               419-720
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               79, 35
               

               Conread position:
               422-711
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               428-646
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               194, 32
               

               Conread position:
               456-691
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               109, 75
               

               Conread position:
               456-721
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 190
               
Show alignments to all cow chromosomes.