Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022G06.3
        

               Conread position:
               3-721
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 62
               

               Conread position:
               119-557
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               298
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               24, 153
               

               Conread position:
               122-716
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               125-646
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 161
               

               Conread position:
               158-450
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               158-476
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               35, 243
               

               Conread position:
               158-631
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 73
               

               Conread position:
               158-646
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 125
               

               Conread position:
               158-702
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 5
               

               Conread position:
               158-712
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 140
               

               Conread position:
               158-720
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               161-697
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 225
               

               Conread position:
               164-453
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               164-696
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 167
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 114
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 114
               

               Conread position:
               164-707
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 197
               

               Conread position:
               164-712
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 197
               

               Conread position:
               164-716
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 228
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 185
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 222
               

               Conread position:
               164-721
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 152
               

               Conread position:
               166-614
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               171-404
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 97
               

               Conread position:
               171-557
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 218
               

               Conread position:
               171-639
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               171-713
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 126
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               375
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               172-583
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               172-710
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               356
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               172-710
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               177-646
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               308
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               178-634
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               179-471
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               179-522
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               179-614
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               179-656
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 100
               

               Conread position:
               179-711
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               181-499
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               181-505
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               192-694
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 28
               

               Conread position:
               195-437
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 64
               

               Conread position:
               196-469
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               113, 69
               

               Conread position:
               196-564
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 190
               

               Conread position:
               196-697
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 199
               

               Conread position:
               196-710
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 195
               

               Conread position:
               199-520
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               199-710
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               343
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               239-714
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 9
               

               Conread position:
               246-591
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               150, 68
               

               Conread position:
               253-568
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               259-624
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 6
               

               Conread position:
               259-639
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 6
               

               Conread position:
               259-720
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 97
               

               Conread position:
               265-568
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               282-485
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               114, 28
               

               Conread position:
               285-547
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 104
               

               Conread position:
               295-728
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               14, 96
               

               Conread position:
               296-504
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               311-583
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 77
               

               Conread position:
               311-706
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               311-707
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               255, 69
               

               Conread position:
               311-707
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               84, 72
               

               Conread position:
               331-720
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               344-646
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               344-704
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               175, 44
               

               Conread position:
               344-718
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 44
               

               Conread position:
               347-707
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               49, 41
               

               Conread position:
               349-720
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 39
               

               Conread position:
               350-719
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               354-582
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               354-687
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               355-720
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               355-720
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 29
               

               Conread position:
               368-588
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               377-720
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               132, 83
               

               Conread position:
               397-712
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               401-547
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               401-719
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               409-646
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 209
               

               Conread position:
               421-710
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               150, 32
               

               Conread position:
               422-710
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               424-710
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               164, 10
               

               Conread position:
               429-707
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               443-722
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 18
               

               Conread position:
               455-712
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               463-669
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               103, 131
               
Show alignments to all cow chromosomes.