Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022G06.3
        

               Conread position:
               119-453
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               125-697
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               125-697
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 269
               

               Conread position:
               125-697
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 224
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 267
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 103
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 66
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               412
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               136-720
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               143-589
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 203
               

               Conread position:
               147-727
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               149-707
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               155-486
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               8, 126
               

               Conread position:
               156-392
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               47, 6
               

               Conread position:
               158-597
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 118
               

               Conread position:
               158-618
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               38, 125
               

               Conread position:
               158-644
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               333
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               34, 234
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 223
               

               Conread position:
               161-617
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               303
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               40, 155
               

               Conread position:
               163-598
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               287
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               146, 44
               

               Conread position:
               163-611
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               164-381
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               164-438
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               164-589
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-631
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 70
               

               Conread position:
               164-635
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               164-636
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               328
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               164-646
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 35
               

               Conread position:
               164-646
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 229
               

               Conread position:
               164-669
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 222
               

               Conread position:
               164-707
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 95
               

               Conread position:
               164-712
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 154
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 70
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 230
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 196
               

               Conread position:
               171-471
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 218
               

               Conread position:
               171-527
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-589
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-710
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 217
               

               Conread position:
               171-715
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 111
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               176-487
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               179-588
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               180-697
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 207
               

               Conread position:
               180-720
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               181-598
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               294
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               181-646
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               181-687
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               340
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 84
               

               Conread position:
               181-696
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 140
               

               Conread position:
               185-639
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               301
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               29, 272
               

               Conread position:
               185-720
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 91
               

               Conread position:
               193-576
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               194-413
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               119, 196
               

               Conread position:
               195-710
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               350
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               38, 195
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               352
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               196-720
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 69
               

               Conread position:
               199-394
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               223-720
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 97
               

               Conread position:
               231-641
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               239-589
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               75, 39
               

               Conread position:
               239-716
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 51
               

               Conread position:
               250-707
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               327
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               59, 226
               

               Conread position:
               269-617
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 117
               

               Conread position:
               311-706
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               83, 72
               

               Conread position:
               313-508
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               316-712
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               271
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               319-646
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 69
               

               Conread position:
               319-707
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               82, 63
               

               Conread position:
               322-556
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               74, 61
               

               Conread position:
               322-720
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               288
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               334-719
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               335-720
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               164, 49
               

               Conread position:
               338-641
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 50
               

               Conread position:
               338-721
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               168, 44
               

               Conread position:
               350-697
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               368-612
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               401-719
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               403-707
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               7, 59
               

               Conread position:
               410-707
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               420-721
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               79, 34
               

               Conread position:
               422-621
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               32, 68
               

               Conread position:
               435-614
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 28
               

               Conread position:
               435-720
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               155, 25
               

               Conread position:
               435-728
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 25
               

               Conread position:
               436-711
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               128, 24
               

               Conread position:
               441-720
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 195
               

               Conread position:
               447-720
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               50, 6
               

               Conread position:
               458-720
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               108, 65
               

               Conread position:
               470-720
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               86, 122
               

               Conread position:
               494-710
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               71, 205
               
Show alignments to all cow chromosomes.