Cow genome map

Conread name: Ss1.1-Pig4-TMW8022G06.3

Conread position: 124-694
Cow position:
Alignm length: 596
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 163

Conread position: 125-471
Cow position:
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 17

Conread position: 125-697
Cow position:
Alignm length: 598
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 241

Conread position: 125-697
Cow position:
Alignm length: 601
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 66

Conread position: 125-720
Cow position:
Alignm length: 618
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 272

Conread position: 158-589
Cow position:
Alignm length: 452
Alignm identity: 306
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 158

Conread position: 158-646
Cow position:
Alignm length: 500
Alignm identity: 313
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 126

Conread position: 158-647
Cow position:
Alignm length: 494
Alignm identity: 314
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 151

Conread position: 158-710
Cow position:
Alignm length: 580
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 247

Conread position: 158-720
Cow position:
Alignm length: 580
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 76

Conread position: 161-570
Cow position:
Alignm length: 420
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 69

Conread position: 161-641
Cow position:
Alignm length: 496
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 227

Conread position: 162-634
Cow position:
Alignm length: 489
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 162-668
Cow position:
Alignm length: 521
Alignm identity: 329
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 56, 237

Conread position: 162-707
Cow position:
Alignm length: 564
Alignm identity: 363
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 15, 26

Conread position: 164-589
Cow position:
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 226

Conread position: 164-605
Cow position:
Alignm length: 450
Alignm identity: 295
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 125

Conread position: 164-635
Cow position:
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 179

Conread position: 164-637
Cow position:
Alignm length: 491
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 164-687
Cow position:
Alignm length: 545
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 180

Conread position: 164-697
Cow position:
Alignm length: 549
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 222

Conread position: 164-697
Cow position:
Alignm length: 552
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 224

Conread position: 164-697
Cow position:
Alignm length: 555
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 164-697
Cow position:
Alignm length: 548
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 126

Conread position: 164-697
Cow position:
Alignm length: 553
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 180

Conread position: 164-697
Cow position:
Alignm length: 566
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 225

Conread position: 164-720
Cow position:
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 164-720
Cow position:
Alignm length: 585
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 77

Conread position: 166-693
Cow position:
Alignm length: 554
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 55

Conread position: 171-458
Cow position:
Alignm length: 300
Alignm identity: 201
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 43

Conread position: 171-720
Cow position:
Alignm length: 571
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 220

Conread position: 178-592
Cow position:
Alignm length: 422
Alignm identity: 268
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 70, 20

Conread position: 179-453
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 141, 204

Conread position: 180-716
Cow position:
Alignm length: 555
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 37

Conread position: 181-482
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 38

Conread position: 185-697
Cow position:
Alignm length: 530
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 29

Conread position: 192-587
Cow position:
Alignm length: 405
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 196

Conread position: 195-709
Cow position:
Alignm length: 527
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 63

Conread position: 196-697
Cow position:
Alignm length: 520
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 128

Conread position: 196-710
Cow position:
Alignm length: 528
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 196-720
Cow position:
Alignm length: 544
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 196-720
Cow position:
Alignm length: 544
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 198-589
Cow position:
Alignm length: 402
Alignm identity: 269
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 111, 190

Conread position: 199-716
Cow position:
Alignm length: 530
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 44

Conread position: 199-720
Cow position:
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 194

Conread position: 207-719
Cow position:
Alignm length: 535
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 181

Conread position: 216-646
Cow position:
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 9

Conread position: 233-720
Cow position:
Alignm length: 505
Alignm identity: 334
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 53, 71

Conread position: 239-717
Cow position:
Alignm length: 501
Alignm identity: 326
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 70, 101

Conread position: 241-692
Cow position:
Alignm length: 471
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 124

Conread position: 265-714
Cow position:
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 40

Conread position: 269-636
Cow position:
Alignm length: 376
Alignm identity: 261
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 9

Conread position: 269-720
Cow position:
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 72

Conread position: 278-394
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 285-646
Cow position:
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 102

Conread position: 290-710
Cow position:
Alignm length: 435
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 100

Conread position: 296-720
Cow position:
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 95

Conread position: 311-628
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 130, 51

Conread position: 312-617
Cow position:
Alignm length: 308
Alignm identity: 201
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 86, 70

Conread position: 316-542
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 8

Conread position: 319-720
Cow position:
Alignm length: 410
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 65

Conread position: 328-646
Cow position:
Alignm length: 325
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 70, 61

Conread position: 329-720
Cow position:
Alignm length: 421
Alignm identity: 279
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 67, 9

Conread position: 343-720
Cow position:
Alignm length: 408
Alignm identity: 289
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 53, 41

Conread position: 344-544
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 38

Conread position: 344-645
Cow position:
Alignm length: 315
Alignm identity: 229
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 37, 95

Conread position: 344-716
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 346-706
Cow position:
Alignm length: 370
Alignm identity: 243
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 52, 42

Conread position: 358-548
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 27

Conread position: 369-707
Cow position:
Alignm length: 352
Alignm identity: 240
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 27, 19

Conread position: 404-720
Cow position:
Alignm length: 347
Alignm identity: 234
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 56

Conread position: 417-716
Cow position:
Alignm length: 309
Alignm identity: 204
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 80, 37

Conread position: 428-589
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 32

Conread position: 456-711
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 73

Conread position: 456-719
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 175

Conread position: 466-720
Cow position:
Alignm length: 264
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 104, 80

Conread position: 472-710
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 43

Conread position: 495-720
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 20

Show alignments to all cow chromosomes.