Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8022G06.3
        

               Conread position:
               125-558
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               125-696
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 269
               

               Conread position:
               125-697
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               128-453
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               44, 148
               

               Conread position:
               128-720
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 313
               

               Conread position:
               135-535
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               8, 83
               

               Conread position:
               135-720
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               135-728
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               136-715
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 210
               

               Conread position:
               156-646
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 139
               

               Conread position:
               158-407
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 95
               

               Conread position:
               158-707
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 124
               

               Conread position:
               158-716
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 93
               

               Conread position:
               158-720
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               159-531
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               159-697
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 103
               

               Conread position:
               161-507
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               39, 58
               

               Conread position:
               162-697
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 235
               

               Conread position:
               164-569
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 76
               

               Conread position:
               164-639
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               164-646
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 118
               

               Conread position:
               164-695
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 228
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 225
               

               Conread position:
               164-697
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 308
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               164-720
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 180
               

               Conread position:
               164-721
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 146
               

               Conread position:
               165-697
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 224
               

               Conread position:
               166-720
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 228
               

               Conread position:
               171-416
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-716
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               375
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 219
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-720
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               171-728
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               178-521
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               178-565
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               164, 79
               

               Conread position:
               178-687
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 113
               

               Conread position:
               179-639
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               179-720
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               181-440
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               181-450
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 208
               

               Conread position:
               181-710
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 129
               

               Conread position:
               182-682
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               195-504
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               118, 105
               

               Conread position:
               195-697
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 67
               

               Conread position:
               196-487
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 190
               

               Conread position:
               196-557
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               111, 168
               

               Conread position:
               196-718
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 192
               

               Conread position:
               201-503
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               105, 88
               

               Conread position:
               206-574
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               190, 30
               

               Conread position:
               210-529
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               216-525
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               94, 170
               

               Conread position:
               216-712
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 122
               

               Conread position:
               228-720
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               346
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               75, 79
               

               Conread position:
               232-567
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               81, 153
               

               Conread position:
               239-720
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 152
               

               Conread position:
               246-700
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               290-703
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 154
               

               Conread position:
               292-710
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 22
               

               Conread position:
               292-721
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               311-508
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               311-517
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               84, 50
               

               Conread position:
               311-640
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               314-716
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               292
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               69, 207
               

               Conread position:
               318-720
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               276
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               100, 24
               

               Conread position:
               320-710
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               76, 68
               

               Conread position:
               321-697
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               74, 65
               

               Conread position:
               342-624
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               343-646
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               343-707
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               351-715
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               351-720
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               359-706
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               368-630
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               368-712
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               394-716
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 68
               

               Conread position:
               397-718
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               170, 13
               

               Conread position:
               422-707
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               422-725
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               423-637
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               148, 40
               

               Conread position:
               435-696
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               140, 25
               

               Conread position:
               437-719
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               480-717
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 36
               

               Conread position:
               502-716
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 198
               
Show alignments to all cow chromosomes.