Cow genome map
Conread name: | Ss1.1-Pig4-TMW8022G06.3 |
Conread position: | 125-558 |
Cow position: | chr24:36709079-36709536 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 307 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 39, 18 |
Conread position: | 125-696 |
Cow position: | chr24:147890-147299 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 269 |
Conread position: | 125-697 |
Cow position: | chr24:9544784-9545366 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 138 |
Conread position: | 128-453 |
Cow position: | chr24:40193241-40193573 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 233 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 44, 148 |
Conread position: | 128-720 |
Cow position: | chr24:6337107-6337722 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 313 |
Conread position: | 135-535 |
Cow position: | chr24:12484587-12484175 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 248 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 8, 83 |
Conread position: | 135-720 |
Cow position: | chr24:5992495-5991892 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 28 |
Conread position: | 135-728 |
Cow position: | chr24:6084798-6085407 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 28 |
Conread position: | 136-715 |
Cow position: | chr24:14871580-14870994 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 210 |
Conread position: | 156-646 |
Cow position: | chr24:32846452-32846960 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 139 |
Conread position: | 158-407 |
Cow position: | chr24:6064966-6064712 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 175 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 38, 95 |
Conread position: | 158-707 |
Cow position: | chr24:8151503-8150966 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 124 |
Conread position: | 158-716 |
Cow position: | chr24:38638293-38638865 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 93 |
Conread position: | 158-720 |
Cow position: | chr24:6435236-6435816 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 56 |
Conread position: | 159-531 |
Cow position: | chr24:5942499-5942861 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 241 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 55, 96 |
Conread position: | 159-697 |
Cow position: | chr24:22971851-22972404 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 103 |
Conread position: | 161-507 |
Cow position: | chr24:6475701-6476048 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 239 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 39, 58 |
Conread position: | 162-697 |
Cow position: | chr24:6332935-6332385 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 235 |
Conread position: | 164-569 |
Cow position: | chr24:37200243-37199836 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 76 |
Conread position: | 164-639 |
Cow position: | chr24:12205551-12205057 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 22 |
Conread position: | 164-646 |
Cow position: | chr24:6059664-6060153 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 118 |
Conread position: | 164-695 |
Cow position: | chr24:12129301-12128753 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 228 |
Conread position: | 164-697 |
Cow position: | chr24:12334995-12334445 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 225 |
Conread position: | 164-697 |
Cow position: | chr24:19834154-19834708 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 308 |
Conread position: | 164-720 |
Cow position: | chr24:4414768-4414200 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 225 |
Conread position: | 164-720 |
Cow position: | chr24:12086970-12087542 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 180 |
Conread position: | 164-721 |
Cow position: | chr24:36559011-36558431 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 146 |
Conread position: | 165-697 |
Cow position: | chr24:6406794-6407346 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 224 |
Conread position: | 166-720 |
Cow position: | chr24:29188056-29188626 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 228 |
Conread position: | 171-416 |
Cow position: | chr24:8031061-8031312 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 170 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 30, 43 |
Conread position: | 171-716 |
Cow position: | chr24:12700046-12699490 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 375 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 30, 43 |
Conread position: | 171-720 |
Cow position: | chr24:6024333-6023772 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 43 |
Conread position: | 171-720 |
Cow position: | chr24:9187963-9187409 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 219 |
Conread position: | 171-720 |
Cow position: | chr24:23505094-23504528 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 43 |
Conread position: | 171-720 |
Cow position: | chr24:29305550-29304980 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 43 |
Conread position: | 171-720 |
Cow position: | chr24:44018304-44018841 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 43 |
Conread position: | 171-728 |
Cow position: | chr24:12109936-12109358 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 49 |
Conread position: | 178-521 |
Cow position: | chr24:15248580-15248237 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 215 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 85, 39 |
Conread position: | 178-565 |
Cow position: | chr24:6049337-6049723 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 260 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 164, 79 |
Conread position: | 178-687 |
Cow position: | chr24:19324668-19324150 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 113 |
Conread position: | 179-639 |
Cow position: | chr24:6328253-6327782 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 35 |
Conread position: | 179-720 |
Cow position: | chr24:13233033-13233591 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 32 |
Conread position: | 181-440 |
Cow position: | chr24:28210302-28210033 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 189 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 16, 49 |
Conread position: | 181-450 |
Cow position: | chr24:14383811-14383538 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 199 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 22, 208 |
Conread position: | 181-710 |
Cow position: | chr24:6659709-6659173 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 129 |
Conread position: | 182-682 |
Cow position: | chr24:40655833-40656341 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 24 |
Conread position: | 195-504 |
Cow position: | chr24:12162709-12163021 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 210 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 118, 105 |
Conread position: | 195-697 |
Cow position: | chr24:33934172-33934700 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 67 |
Conread position: | 196-487 |
Cow position: | chr24:29182949-29183244 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 190 |
Conread position: | 196-557 |
Cow position: | chr24:14302279-14302641 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 238 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 111, 168 |
Conread position: | 196-718 |
Cow position: | chr24:7090172-7089636 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 192 |
Conread position: | 201-503 |
Cow position: | chr24:13321967-13322266 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 205 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 105, 88 |
Conread position: | 206-574 |
Cow position: | chr24:43060115-43060472 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 257 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 190, 30 |
Conread position: | 210-529 |
Cow position: | chr24:12143523-12143203 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 220 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 105, 21 |
Conread position: | 216-525 |
Cow position: | chr24:11866430-11866117 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 218 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 94, 170 |
Conread position: | 216-712 |
Cow position: | chr24:25467798-25467303 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 122 |
Conread position: | 228-720 |
Cow position: | chr24:14389711-14389200 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 346 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 75, 79 |
Conread position: | 232-567 |
Cow position: | chr24:40975867-40975533 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 227 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 81, 153 |
Conread position: | 239-720 |
Cow position: | chr24:17696141-17695646 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 152 |
Conread position: | 246-700 |
Cow position: | chr24:34494308-34493867 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 19 |
Conread position: | 290-703 |
Cow position: | chr24:12238189-12238608 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 276 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 19, 154 |
Conread position: | 292-710 |
Cow position: | chr24:14881701-14881286 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 274, 22 |
Conread position: | 292-721 |
Cow position: | chr24:9091167-9090717 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 308 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 17, 44 |
Conread position: | 311-508 |
Cow position: | chr24:27147627-27147823 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 148 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 85, 73 |
Conread position: | 311-517 |
Cow position: | chr24:16535346-16535145 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 149 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 84, 50 |
Conread position: | 311-640 |
Cow position: | chr24:14349111-14349432 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 205 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 77, 39 |
Conread position: | 314-716 |
Cow position: | chr24:6675528-6675939 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 292 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 69, 207 |
Conread position: | 318-720 |
Cow position: | chr24:6142018-6142417 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 276 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 100, 24 |
Conread position: | 320-710 |
Cow position: | chr24:16097479-16097851 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 273 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 76, 68 |
Conread position: | 321-697 |
Cow position: | chr24:14754598-14754998 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 274 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 74, 65 |
Conread position: | 342-624 |
Cow position: | chr24:16855925-16856208 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 185 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 54, 40 |
Conread position: | 343-646 |
Cow position: | chr24:31006478-31006181 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 226 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 52, 19 |
Conread position: | 343-707 |
Cow position: | chr24:40304976-40305350 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 254 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 50, 40 |
Conread position: | 351-715 |
Cow position: | chr24:17321660-17322041 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 258 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 45, 33 |
Conread position: | 351-720 |
Cow position: | chr24:13044675-13044308 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 258 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 45, 37 |
Conread position: | 359-706 |
Cow position: | chr24:17370996-17370652 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 28 |
Conread position: | 368-630 |
Cow position: | chr24:17302516-17302256 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 179 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 28, 7 |
Conread position: | 368-712 |
Cow position: | chr24:6129802-6130153 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 250 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 28, 16 |
Conread position: | 394-716 |
Cow position: | chr24:35841070-35840734 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 234 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 24, 68 |
Conread position: | 397-718 |
Cow position: | chr24:6353164-6353476 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 240 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 170, 13 |
Conread position: | 422-707 |
Cow position: | chr24:37320556-37320270 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 201 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 68, 41 |
Conread position: | 422-725 |
Cow position: | chr24:29408673-29408365 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 215 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 9, 16 |
Conread position: | 423-637 |
Cow position: | chr24:43809986-43810198 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 150 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 148, 40 |
Conread position: | 435-696 |
Cow position: | chr24:6064706-6064448 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 192 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 140, 25 |
Conread position: | 437-719 |
Cow position: | chr24:17409522-17409810 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 202 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 65, 26 |
Conread position: | 480-717 |
Cow position: | chr24:13513143-13512896 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 169 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 90, 36 |
Conread position: | 502-716 |
Cow position: | chr24:36480849-36480627 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 156 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 20, 198 |
Show alignments to all cow chromosomes.